RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 IGLV3-9A0A075B6K5 115 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 C9JQL5 133 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 HIST2H2BCQ6DN03 193 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 IGLV10-54A0A075B6I4 117 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 OPRPNQ99935 248 aaPredicted RBP9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 GP9P14770 177 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 KNL1Q8NG31 2342 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 C15orf65H3BRN8 121 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 IGLL5B9A064 214 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 ATP5G1P05496 136 aa9.68□□□□□ -0.86
CACNA1C-219ENST00000399649 ARTNQ5T4W7 220 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 C17orf77Q96MU5 243 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 ATOX1O00244 68 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 IL15RAQ13261 267 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 DIAPH2-AS1Q14236 149 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 IGKV3D-7A0A0C4DH55 119 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 IGLC7A0M8Q6 106 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 ETV2O00321 342 aaPredicted RBP9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 IGHV4-59P01825 116 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 IGFL3Q6UXB1 125 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 CRIPAKQ8N1N5 446 aa9.67□□□□□ -0.86
CACNA1C-219ENST00000399649 DEFB136Q30KP8 78 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 ZNF491Q8N8L2 437 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 FANCD2OSQ96PS1 177 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 SLURP1P55000 103 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 WIPF2Q8TF74 440 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 LRRK1Q38SD2 2015 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 NDUFA1O15239 70 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 IGHV2-5P01817 119 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 IGFBPL1Q8WX77 278 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 TP53BP1Q12888 1972 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 SCN5AQ14524 2016 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 LTBP1Q14766 1721 aa9.66□□□□□ -0.86
CACNA1C-219ENST00000399649 TM2D2Q9BX73 214 aa9.65□□□□□ -0.86
CACNA1C-219ENST00000399649 LENEPQ9Y5L5 61 aa9.65□□□□□ -0.86
CACNA1C-219ENST00000399649 ESPL1Q14674 2120 aa9.65□□□□□ -0.86
CACNA1C-219ENST00000399649 MPDZO75970 2070 aa9.65□□□□□ -0.86
CACNA1C-219ENST00000399649 B5MCH6 92 aa9.65□□□□□ -0.86
CACNA1C-219ENST00000399649 K7EN84 100 aa9.65□□□□□ -0.86
CACNA1C-219ENST00000399649 MUSTN1Q8IVN3 82 aa9.65□□□□□ -0.86
CACNA1C-219ENST00000399649 NPBQ8NG41 125 aa9.65□□□□□ -0.86
CACNA1C-219ENST00000399649 SIPA1L1O43166 1804 aa9.65□□□□□ -0.87
CACNA1C-219ENST00000399649 KIF26BQ2KJY2 2108 aa9.65□□□□□ -0.87
CACNA1C-219ENST00000399649 TMEM61Q8N0U2 210 aa9.65□□□□□ -0.87
CACNA1C-219ENST00000399649 KLK5Q9Y337 293 aaPredicted RBP9.65□□□□□ -0.87
CACNA1C-219ENST00000399649 SEM1Q6ZVN7 128 aa9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 RPL39LQ96EH5 51 aaKnown RBP9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 H0Y9J4 135 aa9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 HIGD2BQ4VC39 106 aa9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 SPATA25Q9BR10 227 aa9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 FANCMQ8IYD8 2048 aa9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 GREB1LQ9C091 1923 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 Q6ZVH6 145 aa9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 ZNF747Q9BV97 191 aa9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 AGPAT4-IT1Q9H0P7 198 aa9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 KLF2Q9Y5W3 355 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-219ENST00000399649 SBF1O95248 1867 aa9.63□□□□□ -0.87
CACNA1C-219ENST00000399649 SMIM20Q8N5G0 67 aa9.63□□□□□ -0.87
CACNA1C-219ENST00000399649 IGLV1-44P01699 117 aa9.63□□□□□ -0.87
CACNA1C-219ENST00000399649 B9D2Q9BPU9 175 aa9.63□□□□□ -0.87
CACNA1C-219ENST00000399649 LINC01620Q4KN68 170 aa9.63□□□□□ -0.87
CACNA1C-219ENST00000399649 CCL25O15444 150 aa9.63□□□□□ -0.87
CACNA1C-219ENST00000399649 FREM3P0C091 2139 aa9.63□□□□□ -0.87
CACNA1C-219ENST00000399649 DEFB113Q30KQ7 82 aa9.62□□□□□ -0.87
CACNA1C-219ENST00000399649 PCP2Q8IVA1 136 aa9.62□□□□□ -0.87
CACNA1C-219ENST00000399649 DIRC1Q969H9 104 aa9.62□□□□□ -0.87
CACNA1C-219ENST00000399649 SVILO95425 2214 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 IGHV2-70P01814 119 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 KAAG1Q9UBP8 84 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 PRSS33Q8NF86 280 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 CXCL5P42830 114 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 PRR20EP86478 221 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 PRR20CP86479 221 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 PRR20DP86480 221 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 PRR20BP86481 221 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 PRR20AP86496 221 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 C10orf91Q5T1B1 145 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 SLX1AQ9BQ83 275 aa9.61□□□□□ -0.87
CACNA1C-219ENST00000399649 J3KT08 172 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 GATA1P15976 413 aaPredicted RBP9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 SPRY2O43597 315 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 ZNF503-AS2A6NEH8 195 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 DEFB125Q8N687 156 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 FHL1Q13642 323 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 ABCA7Q8IZY2 2146 aa9.6□□□□□ -0.87
CACNA1C-219ENST00000399649 TRBV12-3P01733 135 aa9.59□□□□□ -0.87
CACNA1C-219ENST00000399649 RNF183Q96D59 192 aa9.59□□□□□ -0.87
CACNA1C-219ENST00000399649 DOCK6Q96HP0 2047 aa9.59□□□□□ -0.87
CACNA1C-219ENST00000399649 ESM1Q9NQ30 184 aa9.59□□□□□ -0.87
CACNA1C-219ENST00000399649 RP1P56715 2156 aa9.59□□□□□ -0.87
CACNA1C-219ENST00000399649 CASC2Q6XLA1 102 aa9.59□□□□□ -0.87
CACNA1C-219ENST00000399649 PTPRDP23468 1912 aa9.59□□□□□ -0.87
CACNA1C-219ENST00000399649 POU2AF1Q16633 256 aa9.59□□□□□ -0.87
CACNA1C-219ENST00000399649 CENPVL3A0A0U1RRI6 287 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms