RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ZCCHC24Q8N2G6 241 aaKnown RBP7.62□□□□□ -1.19
SMAD9-203ENST00000399275 TMEM133Q9H2Q1 129 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 COL4A4P53420 1690 aaPredicted RBP7.62□□□□□ -1.19
SMAD9-203ENST00000399275 CCL3L1P16619 93 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 PRR20EP86478 221 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 PRR20CP86479 221 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 PRR20DP86480 221 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 PRR20BP86481 221 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 PRR20AP86496 221 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 SS18Q15532 418 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 TMEM61Q8N0U2 210 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 IGHV1-18A0A0C4DH31 117 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 SDHAF1A6NFY7 115 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 LINC00205P59089 165 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 FOXE3Q13461 319 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 COL4A3Q01955 1670 aa7.62□□□□□ -1.19
SMAD9-203ENST00000399275 USP17L23D6RBM5 183 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 I3L3M4 83 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 ATP5EP2Q5VTU8 51 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 TCF20Q9UGU0 1960 aaKnown RBP7.61□□□□□ -1.19
SMAD9-203ENST00000399275 DOPEY2Q9Y3R5 2298 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 TRAV26-2A0A0B4J265 109 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 K7ERS5 55 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 CFHR4Q92496 578 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 RNF5Q99942 180 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 ANAPC1Q9H1A4 1944 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 A0A1W2PRX2 142 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 C17orf100A8MU93 164 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 NDUFA11Q86Y39 141 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 ALPK3Q96L96 1907 aa7.61□□□□□ -1.19
SMAD9-203ENST00000399275 KLHL30-AS1Q8NEE0 82 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 LINC00526Q96FQ7 95 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 PRR15LQ9BU68 103 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 IGKV1D-17A0A075B6S4 117 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 PRORYQ9H606 182 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 IGHV4-28A0A0C4DH34 117 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 C10orf55Q5SWW7 151 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 C9orf106Q8NAJ2 232 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 PIFOQ8TCI5 191 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 SNURFQ9Y675 71 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 BLCAPP62952 87 aa7.6□□□□□ -1.19
SMAD9-203ENST00000399275 HELZP42694 1942 aaKnown RBP7.59□□□□□ -1.19
SMAD9-203ENST00000399275 IGHV1-8P0DP01 117 aa7.59□□□□□ -1.19
SMAD9-203ENST00000399275 DEFB124Q8NES8 71 aa7.59□□□□□ -1.19
SMAD9-203ENST00000399275 DOCK10Q96BY6 2186 aa7.59□□□□□ -1.19
SMAD9-203ENST00000399275 NSUN5P1Q3KNT7 163 aa7.59□□□□□ -1.19
SMAD9-203ENST00000399275 KRTAP27-1Q3LI81 207 aa7.59□□□□□ -1.19
SMAD9-203ENST00000399275 NDUFA4L2Q9NRX3 87 aa7.59□□□□□ -1.19
SMAD9-203ENST00000399275 SOSTDC1Q6X4U4 206 aa7.59□□□□□ -1.19
SMAD9-203ENST00000399275 SPRR3Q9UBC9 169 aa7.59□□□□□ -1.19
SMAD9-203ENST00000399275 MLANAQ16655 118 aa7.59□□□□□ -1.2
SMAD9-203ENST00000399275 SHANK2-AS3Q9BTD1 123 aa7.59□□□□□ -1.2
SMAD9-203ENST00000399275 TMEM14CQ9P0S9 112 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 HEATR5AQ86XA9 2040 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 IGHV1-46P01743 117 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 DTX1Q86Y01 620 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 C8orf49Q96NF6 230 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 Q9H8V8 135 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 DOCK7Q96N67 2140 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 ZNF883P0CG24 379 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 OPRPNQ99935 248 aaPredicted RBP7.58□□□□□ -1.2
SMAD9-203ENST00000399275 FANCMQ8IYD8 2048 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 H3BQ85 93 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 RNASE13Q5GAN3 156 aaKnown RBP7.58□□□□□ -1.2
SMAD9-203ENST00000399275 C9orf139Q6ZV77 190 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 COX7B2Q8TF08 81 aa7.58□□□□□ -1.2
SMAD9-203ENST00000399275 ENHOQ6UWT2 76 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 GAFA1Q96PS6 74 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 CEP290O15078 2479 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 LECT2O14960 151 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 HTN3P15516 51 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 FAM120AOSQ5T036 256 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 TMEM200BQ69YZ2 307 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 FAM168AQ92567 244 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 FXYD5Q96DB9 178 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 C15orf65H3BRN8 121 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 THAP8Q8NA92 274 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 KIAA1671Q9BY89 1806 aa7.57□□□□□ -1.2
SMAD9-203ENST00000399275 ARHGEF17Q96PE2 2063 aaPredicted RBP7.56□□□□□ -1.2
SMAD9-203ENST00000399275 IGKV1-16P04430 117 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 PDE6GP18545 87 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 WDR86Q86TI4 376 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 IGF2BP2-AS1Q96M15 143 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 TRBV27A0A0K0K1C4 114 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 Q0VFX4 171 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 IGFL4Q6B9Z1 124 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 AKAP6Q13023 2319 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 DOCK8Q8NF50 2099 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 NANOS2P60321 138 aaKnown RBP7.56□□□□□ -1.2
SMAD9-203ENST00000399275 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 ATP1A1-AS1Q5TC04 95 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 PROK2Q9HC23 129 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 C2orf70A6NJV1 201 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 TM2D2Q9BX73 214 aa7.56□□□□□ -1.2
SMAD9-203ENST00000399275 LRRK1Q38SD2 2015 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 LY6EQ16553 131 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 ASPHD1Q5U4P2 390 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 NKAPP1Q8N9T2 125 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 MRPS12O15235 138 aaKnown RBP7.55□□□□□ -1.2
SMAD9-203ENST00000399275 ZNF833PQ6ZTB9 187 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms