RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CDH23Q9H251 3354 aa11.5□□□□□ -0.57
RPRD1A-202ENST00000399022 C19orf54Q5BKX5 351 aa11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 HIGD1BQ9P298 99 aa11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 C9orf153Q5TBE3 101 aa11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 COX6B1P14854 86 aa11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 GNLYP22749 145 aa11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 DAZAP2Q15038 168 aaPredicted RBP11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 IL17RELQ6ZVW7 336 aa11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 DYNLRB2Q8TF09 96 aa11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 RNF5Q99942 180 aa11.49□□□□□ -0.57
RPRD1A-202ENST00000399022 TANC2Q9HCD6 1990 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 H3BMM0 161 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 UBE2WQ96B02 151 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 C2orf91Q6ZV80 131 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 RITA1Q96K30 269 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 NAV3Q8IVL0 2385 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 SHISA9B4DS77 424 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 C15orf53Q8NAA6 179 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 RNF183Q96D59 192 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 MSRB2Q9Y3D2 182 aa11.48□□□□□ -0.57
RPRD1A-202ENST00000399022 H3BRN7 92 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 SP5Q6BEB4 398 aaPredicted RBP11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 SAA4P35542 130 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 NEGR1Q7Z3B1 354 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 LINC00311Q8N616 119 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 OR13C6PQ8NH95 151 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 SMIM2Q9BVW6 85 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 EDA2RQ9HAV5 297 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 CCDC168Q8NDH2 2452 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 E7EUB6 86 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 CD28P10747 220 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 TEN1Q86WV5 123 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 TP53TG1Q9Y2A0 90 aa11.47□□□□□ -0.57
RPRD1A-202ENST00000399022 SPTBN4Q9H254 2564 aa11.46□□□□□ -0.57
RPRD1A-202ENST00000399022 NCKAP5O14513 1909 aa11.46□□□□□ -0.57
RPRD1A-202ENST00000399022 COPS9Q8WXC6 57 aa11.46□□□□□ -0.57
RPRD1A-202ENST00000399022 TMEM101Q96IK0 257 aa11.46□□□□□ -0.57
RPRD1A-202ENST00000399022 SPANXB1Q9NS25 103 aaPredicted RBP11.46□□□□□ -0.57
RPRD1A-202ENST00000399022 IGHV3OR16-12A0A075B7B8 117 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 PRSS22Q9GZN4 317 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 CHD8Q9HCK8 2581 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 IGKV3OR2-268A0A0C4DH90 116 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 M0R1W7 72 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 VCYO14598 125 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 ODF1Q14990 250 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 Q8N7P7 452 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 ZNF491Q8N8L2 437 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 PLEKHB2Q96CS7 222 aa11.46□□□□□ -0.58
RPRD1A-202ENST00000399022 HCFC1P51610 2035 aa11.45□□□□□ -0.58
RPRD1A-202ENST00000399022 MYO9AB2RTY4 2548 aa11.45□□□□□ -0.58
RPRD1A-202ENST00000399022 SPXQ9BT56 116 aa11.45□□□□□ -0.58
RPRD1A-202ENST00000399022 TRIOO75962 3097 aa11.45□□□□□ -0.58
RPRD1A-202ENST00000399022 WNK1Q9H4A3 2382 aa11.45□□□□□ -0.58
RPRD1A-202ENST00000399022 A0A087WWL8 130 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 G3V318 75 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 MT-ATP8P03928 68 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 PAX8Q06710 450 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 SIGLEC15Q6ZMC9 328 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 TRAV41A0A0B4J266 112 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 NPFFO15130 113 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 MINOS1Q5TGZ0 78 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 MINOS1-NBL1R4GNA1 71 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 C1orf229Q6ZS94 237 aaPredicted RBP11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 KAAG1Q9UBP8 84 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 SPANXA1Q9NS26 97 aa11.44□□□□□ -0.58
RPRD1A-202ENST00000399022 H3BUX3 64 aa11.43□□□□□ -0.58
RPRD1A-202ENST00000399022 ZNF876PQ49A33 203 aa11.43□□□□□ -0.58
RPRD1A-202ENST00000399022 TCTEX1D4Q5JR98 221 aa11.43□□□□□ -0.58
RPRD1A-202ENST00000399022 YAE1D1Q9NRH1 226 aa11.43□□□□□ -0.58
RPRD1A-202ENST00000399022 RUSC1-AS1Q66K80 236 aa11.43□□□□□ -0.58
RPRD1A-202ENST00000399022 C3orf56Q8N813 242 aa11.43□□□□□ -0.58
RPRD1A-202ENST00000399022 MLST8Q9BVC4 326 aa11.43□□□□□ -0.58
RPRD1A-202ENST00000399022 TRANK1O15050 2925 aa11.43□□□□□ -0.58
RPRD1A-202ENST00000399022 TRBV7-9A0A0J9YWB2 115 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 SPRY2O43597 315 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 PMVKQ15126 192 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 NBL1P41271 181 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 ARHGAP32A7KAX9 2087 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 IGKV2D-26A0A0A0MRZ7 120 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 ATP6V0E1O15342 81 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 IGKV1-17P01599 117 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 TOMM7Q9P0U1 55 aa11.42□□□□□ -0.58
RPRD1A-202ENST00000399022 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
RPRD1A-202ENST00000399022 E9PLD3 99 aa11.41□□□□□ -0.58
RPRD1A-202ENST00000399022 EIF4EBP1Q13541 118 aaPredicted RBP11.41□□□□□ -0.58
RPRD1A-202ENST00000399022 Q6ZUT4 128 aa11.41□□□□□ -0.58
RPRD1A-202ENST00000399022 FCN3O75636 299 aa11.41□□□□□ -0.58
RPRD1A-202ENST00000399022 SNRPD3P62318 126 aaKnown RBP11.41□□□□□ -0.58
RPRD1A-202ENST00000399022 ANKRD29Q8N6D5 301 aa11.41□□□□□ -0.58
RPRD1A-202ENST00000399022 MOB4Q9Y3A3 225 aa11.41□□□□□ -0.58
RPRD1A-202ENST00000399022 VWC2LB2RUY7 222 aa11.4□□□□□ -0.58
RPRD1A-202ENST00000399022 J3QQQ9 107 aa11.4□□□□□ -0.58
RPRD1A-202ENST00000399022 OVOL1O14753 267 aa11.4□□□□□ -0.58
RPRD1A-202ENST00000399022 CPAMD8Q8IZJ3 1885 aa11.4□□□□□ -0.58
RPRD1A-202ENST00000399022 C2CD3Q4AC94 2353 aa11.4□□□□□ -0.58
RPRD1A-202ENST00000399022 TIMM21Q9BVV7 248 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms