RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 A0A1W2PPQ1 181 aa9.24□□□□□ -0.93
VCX3A-202ENST00000398729 RNF222A6NCQ9 220 aa9.24□□□□□ -0.93
VCX3A-202ENST00000398729 TCRAP04437 139 aa9.24□□□□□ -0.93
VCX3A-202ENST00000398729 MRPL23Q16540 153 aaKnown RBP9.24□□□□□ -0.93
VCX3A-202ENST00000398729 RGS21Q2M5E4 152 aa9.24□□□□□ -0.93
VCX3A-202ENST00000398729 RPL7L1Q6DKI1 246 aaKnown RBP9.24□□□□□ -0.93
VCX3A-202ENST00000398729 OR2T35Q8NGX2 323 aa9.24□□□□□ -0.93
VCX3A-202ENST00000398729 TVP23CQ96ET8 276 aa9.24□□□□□ -0.93
VCX3A-202ENST00000398729 SGK494Q96LW2 274 aa9.24□□□□□ -0.93
VCX3A-202ENST00000398729 C8orf49Q96NF6 230 aa9.24□□□□□ -0.93
VCX3A-202ENST00000398729 M0R2P5 195 aa9.23□□□□□ -0.93
VCX3A-202ENST00000398729 GNRH2O43555 120 aa9.23□□□□□ -0.93
VCX3A-202ENST00000398729 IQCF2Q8IXL9 164 aa9.23□□□□□ -0.93
VCX3A-202ENST00000398729 KCNS1Q96KK3 526 aa9.23□□□□□ -0.93
VCX3A-202ENST00000398729 KRTAP1-5Q9BYS1 174 aa9.23□□□□□ -0.93
VCX3A-202ENST00000398729 SDF2L1Q9HCN8 221 aa9.23□□□□□ -0.93
VCX3A-202ENST00000398729 IGHV3-16A0A0C4DH30 117 aa9.22□□□□□ -0.93
VCX3A-202ENST00000398729 TYMSP04818 313 aa9.22□□□□□ -0.93
VCX3A-202ENST00000398729 SFTA3P0C7M3 94 aa9.22□□□□□ -0.93
VCX3A-202ENST00000398729 BTF3P20290 206 aaKnown RBP9.22□□□□□ -0.93
VCX3A-202ENST00000398729 SUMO1P63165 101 aaKnown RBP9.22□□□□□ -0.93
VCX3A-202ENST00000398729 ZNF479Q96JC4 524 aa9.22□□□□□ -0.93
VCX3A-202ENST00000398729 PSG8Q9UQ74 426 aa9.22□□□□□ -0.93
VCX3A-202ENST00000398729 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 GGTLC3B5MD39 225 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 SIVA1O15304 175 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 CDK2AP2O75956 126 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 FLI1Q01543 452 aaPredicted RBP9.21□□□□□ -0.94
VCX3A-202ENST00000398729 NEGR1Q7Z3B1 354 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 MAPKAPK5-AS1Q8N8E1 139 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 OR4C5Q8NGB2 326 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 PCNPQ8WW12 178 aaKnown RBP9.21□□□□□ -0.94
VCX3A-202ENST00000398729 EPDR1Q9UM22 224 aa9.21□□□□□ -0.94
VCX3A-202ENST00000398729 CTXND1A0A1B0GTU2 59 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 A0A1W2PRE2 83 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 FBLL1A6NHQ2 334 aaKnown RBP9.2□□□□□ -0.94
VCX3A-202ENST00000398729 TAAR5O14804 337 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 NXPH4O95158 308 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 GCGP01275 180 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 ORM1P02763 201 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 SRIP30626 198 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 ZFP69Q49AA0 526 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 AKR1C8PQ5T2L2 129 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 PRNTQ86SH4 94 aa9.2□□□□□ -0.94
VCX3A-202ENST00000398729 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 C9JCJ5 164 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 K7EQD1 137 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 ARPC5O15511 151 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 IGLV2-11P01706 119 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 PFN1P07737 140 aaKnown RBP9.19□□□□□ -0.94
VCX3A-202ENST00000398729 GYPEP15421 78 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 ZNF80P51504 273 aaPredicted RBP9.19□□□□□ -0.94
VCX3A-202ENST00000398729 ZNF726P1Q15940 193 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 SMUG1Q53HV7 270 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 SAPCD1Q5SSQ6 148 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 TMEM75Q8N9X5 138 aa9.19□□□□□ -0.94
VCX3A-202ENST00000398729 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
VCX3A-202ENST00000398729 G3V3Q6 166 aa9.18□□□□□ -0.94
VCX3A-202ENST00000398729 IFNA7P01567 189 aa9.18□□□□□ -0.94
VCX3A-202ENST00000398729 Q8N1X5 172 aa9.18□□□□□ -0.94
VCX3A-202ENST00000398729 TXNDC17Q9BRA2 123 aa9.18□□□□□ -0.94
VCX3A-202ENST00000398729 FAT1Q14517 4588 aa9.18□□□□□ -0.94
VCX3A-202ENST00000398729 PPT1P50897 306 aa9.17□□□□□ -0.94
VCX3A-202ENST00000398729 LINC00315P59091 139 aa9.17□□□□□ -0.94
VCX3A-202ENST00000398729 UBE2G2P60604 165 aa9.17□□□□□ -0.94
VCX3A-202ENST00000398729 NKX6-2Q9C056 277 aaPredicted RBP9.17□□□□□ -0.94
VCX3A-202ENST00000398729 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
VCX3A-202ENST00000398729 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
VCX3A-202ENST00000398729 FGF8P55075 233 aaPredicted RBP9.16□□□□□ -0.94
VCX3A-202ENST00000398729 ZNF876PQ49A33 203 aa9.16□□□□□ -0.94
VCX3A-202ENST00000398729 SH2D6Q7Z4S9 175 aa9.16□□□□□ -0.94
VCX3A-202ENST00000398729 LINC00479Q96M42 142 aa9.16□□□□□ -0.94
VCX3A-202ENST00000398729 TRAV9-2A0A087WT02 112 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 TRAV34A0A0B4J273 112 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 PEX7O00628 323 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 CIDEAO60543 219 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 GATA1P15976 413 aaPredicted RBP9.15□□□□□ -0.94
VCX3A-202ENST00000398729 SPATA12Q7Z6I5 190 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 C9orf85Q96MD7 179 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 CYTL1Q9NRR1 136 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 LY96Q9Y6Y9 160 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 ARL2-SNX15V9GYD0 113 aa9.15□□□□□ -0.94
VCX3A-202ENST00000398729 LOC100131303A0A0U1RQF7 123 aa9.14□□□□□ -0.95
VCX3A-202ENST00000398729 FAM74A7A6NL05 159 aa9.14□□□□□ -0.95
VCX3A-202ENST00000398729 SMLR1H3BR10 107 aa9.14□□□□□ -0.95
VCX3A-202ENST00000398729 K7EP13 123 aa9.14□□□□□ -0.95
VCX3A-202ENST00000398729 NHLRC2Q8NBF2 726 aa9.14□□□□□ -0.95
VCX3A-202ENST00000398729 STOML3Q8TAV4 291 aa9.14□□□□□ -0.95
VCX3A-202ENST00000398729 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 RS1O15537 224 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 RNASE3P12724 160 aaKnown RBP9.13□□□□□ -0.95
VCX3A-202ENST00000398729 EVI2AP22794 236 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 S100A4P26447 101 aaKnown RBP9.13□□□□□ -0.95
VCX3A-202ENST00000398729 ZNF345Q14585 488 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 CFAP126Q5VTH2 177 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms