RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 U3KQE9 123 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 SOCS3O14543 225 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 CCL18P55774 89 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 DEFB105AQ8NG35 78 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
PCDHA11-201ENST00000398640 DOCK10Q96BY6 2186 aa11.19□□□□□ -0.62
PCDHA11-201ENST00000398640 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
PCDHA11-201ENST00000398640 ADAMTSL5Q6ZMM2 481 aa11.19□□□□□ -0.62
PCDHA11-201ENST00000398640 CRLF1O75462 422 aa11.19□□□□□ -0.62
PCDHA11-201ENST00000398640 C18orf32Q8TCD1 76 aa11.19□□□□□ -0.62
PCDHA11-201ENST00000398640 DEFB4AO15263 64 aa11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 CITED2Q99967 270 aaPredicted RBP11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 BLCAPP62952 87 aa11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 CD5LO43866 347 aa11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 PYY3Q5JQD4 70 aa11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 NDUFA12Q9UI09 145 aa11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 IGHV1-24A0A0C4DH33 117 aa11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 ZNF664Q8N3J9 261 aa11.18□□□□□ -0.62
PCDHA11-201ENST00000398640 HAMPP81172 84 aa11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 TRAV12-1A0A0B4J245 112 aa11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 WFDC11Q8NEX6 87 aa11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 MRPL53Q96EL3 112 aaKnown RBP11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 WIPF3A6NGB9 483 aa11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 H3BUA1 57 aa11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 RSPO1Q2MKA7 263 aaPredicted RBP11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 IGKV2-29A2NJV5 120 aaPredicted RBP11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 SLAQ13239 276 aa11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 RHOHQ15669 191 aa11.17□□□□□ -0.62
PCDHA11-201ENST00000398640 ZGRF1Q86YA3 2104 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 NDUFS5O43920 106 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 CT83Q5H943 113 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 FOXE3Q13461 319 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 INAFM1C9JVW0 142 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 C1orf147Q96MC9 270 aaPredicted RBP11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 C1orf43Q9BWL3 253 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 NPYP01303 97 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 OR11H6Q8NGC7 330 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 TMEM14CQ9P0S9 112 aa11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 POLR3KQ9Y2Y1 108 aaPredicted RBP11.16□□□□□ -0.62
PCDHA11-201ENST00000398640 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
PCDHA11-201ENST00000398640 FXYD5Q96DB9 178 aa11.15□□□□□ -0.62
PCDHA11-201ENST00000398640 SIGLEC8Q9NYZ4 499 aa11.15□□□□□ -0.62
PCDHA11-201ENST00000398640 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.63
PCDHA11-201ENST00000398640 NDUFS6O75380 124 aaKnown RBP11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 IGLV10-54A0A075B6I4 117 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 hADV29S1A0JD25 119 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 CLPSL1A2RUU4 121 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 CRYGCP07315 174 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 Q0VG73 95 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 KLK5Q9Y337 293 aaPredicted RBP11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 ROS1P08922 2347 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 MRPL52Q86TS9 123 aaKnown RBP11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 DENND4AQ7Z401 1863 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 GYPEP15421 78 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 DSCR8Q96T75 97 aa11.14□□□□□ -0.63
PCDHA11-201ENST00000398640 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 FGF6P10767 208 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 CFHR4Q92496 578 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 RITA1Q96K30 269 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 MRPL35Q9NZE8 188 aaKnown RBP11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 V9GYV3 84 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 ZNF491Q8N8L2 437 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 C8orf31Q8N9H6 132 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 IGHV4OR15-8A0A075B7B6 117 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 A0A087WW49 117 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 IGLL5B9A064 214 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 HERVK_113P63121 156 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 C11orf53Q8IXP5 236 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 IGHV4-31P0DP07 118 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 DEFB135Q30KP9 77 aa11.13□□□□□ -0.63
PCDHA11-201ENST00000398640 SMIM2Q9BVW6 85 aa11.12□□□□□ -0.63
PCDHA11-201ENST00000398640 SMIM27A0A1W2PRY6 76 aa11.12□□□□□ -0.63
PCDHA11-201ENST00000398640 MUC22E2RYF6 1773 aaPredicted RBP11.12□□□□□ -0.63
PCDHA11-201ENST00000398640 DLEU1O43261 78 aa11.12□□□□□ -0.63
PCDHA11-201ENST00000398640 BUB3O43684 328 aa11.12□□□□□ -0.63
PCDHA11-201ENST00000398640 PKDREJQ9NTG1 2253 aa11.12□□□□□ -0.63
PCDHA11-201ENST00000398640 AJUBAQ96IF1 538 aa11.11□□□□□ -0.63
PCDHA11-201ENST00000398640 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
PCDHA11-201ENST00000398640 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
PCDHA11-201ENST00000398640 TIRAPP58753 221 aa11.11□□□□□ -0.63
PCDHA11-201ENST00000398640 WIPF2Q8TF74 440 aaPredicted RBP11.11□□□□□ -0.63
PCDHA11-201ENST00000398640 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
PCDHA11-201ENST00000398640 ATP5G1P05496 136 aa11.11□□□□□ -0.63
PCDHA11-201ENST00000398640 UBE2V1Q13404 147 aa11.11□□□□□ -0.63
PCDHA11-201ENST00000398640 A8MWP6 167 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 LY6G6DO95868 133 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 UBL5Q9BZL1 73 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 ZNF503Q96F45 646 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 TIMM17AQ99595 171 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 K7ERJ3 54 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 IGLV3-1P01715 115 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 C16orf74Q96GX8 76 aa11.1□□□□□ -0.63
PCDHA11-201ENST00000398640 KRTAP27-1Q3LI81 207 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms