RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MUC21Q5SSG8 566 aa20.13■□□□□ 0.81
CPNE1-203ENST00000397442 NUP35Q8NFH5 326 aa20.13■□□□□ 0.81
CPNE1-203ENST00000397442 G3V4G9 280 aa20.13■□□□□ 0.81
CPNE1-203ENST00000397442 GIG44P09565 113 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-203ENST00000397442 RPL35AP18077 110 aaKnown RBP20.13■□□□□ 0.81
CPNE1-203ENST00000397442 FOXA3P55318 350 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-203ENST00000397442 RPS20P60866 119 aaKnown RBP20.13■□□□□ 0.81
CPNE1-203ENST00000397442 ANXA2RQ3ZCQ2 193 aa20.13■□□□□ 0.81
CPNE1-203ENST00000397442 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.13■□□□□ 0.81
CPNE1-203ENST00000397442 NAT8BQ9UHF3 227 aa20.13■□□□□ 0.81
CPNE1-203ENST00000397442 NAGKQ9UJ70 344 aa20.13■□□□□ 0.81
CPNE1-203ENST00000397442 XKRY2A2RUG3 117 aa20.11■□□□□ 0.81
CPNE1-203ENST00000397442 GRIFINA4D1Z8 144 aa20.11■□□□□ 0.81
CPNE1-203ENST00000397442 NUTF2P61970 127 aaKnown RBP20.11■□□□□ 0.81
CPNE1-203ENST00000397442 SAMD5Q5TGI4 173 aa20.11■□□□□ 0.81
CPNE1-203ENST00000397442 SRD5A3Q9H8P0 318 aa20.11■□□□□ 0.81
CPNE1-203ENST00000397442 XCL2Q9UBD3 114 aa20.11■□□□□ 0.81
CPNE1-203ENST00000397442 TRAV9-1A0A075B6T8 112 aa20.1■□□□□ 0.81
CPNE1-203ENST00000397442 AMBPP02760 352 aa20.1■□□□□ 0.81
CPNE1-203ENST00000397442 IGLC6P0CF74 106 aa20.1■□□□□ 0.81
CPNE1-203ENST00000397442 TDRG1Q3Y452 100 aa20.1■□□□□ 0.81
CPNE1-203ENST00000397442 BTF3L4Q96K17 158 aa20.08■□□□□ 0.81
CPNE1-203ENST00000397442 PGLYRP4Q96LB8 373 aa20.08■□□□□ 0.81
CPNE1-203ENST00000397442 INSP01308 110 aa20.07■□□□□ 0.8
CPNE1-203ENST00000397442 MORN3Q6PF18 240 aaPredicted RBP20.07■□□□□ 0.8
CPNE1-203ENST00000397442 FAM159AQ6UWV7 190 aa20.07■□□□□ 0.8
CPNE1-203ENST00000397442 FAM210BQ96KR6 192 aa20.07■□□□□ 0.8
CPNE1-203ENST00000397442 GNRH2O43555 120 aa20.07■□□□□ 0.8
CPNE1-203ENST00000397442 SPINK4O60575 86 aa20.07■□□□□ 0.8
CPNE1-203ENST00000397442 C20orf144Q9BQM9 153 aa20.07■□□□□ 0.8
CPNE1-203ENST00000397442 FRMD6-AS1P0C7T7 363 aa20.06■□□□□ 0.8
CPNE1-203ENST00000397442 IGHV1OR15-1A0A075B7D0 117 aa20.05■□□□□ 0.8
CPNE1-203ENST00000397442 TYMSP04818 313 aa20.05■□□□□ 0.8
CPNE1-203ENST00000397442 C1orf158Q8N1D5 194 aa20.05■□□□□ 0.8
CPNE1-203ENST00000397442 FER1L6-AS1Q8NA97 138 aa20.05■□□□□ 0.8
CPNE1-203ENST00000397442 KCNS1Q96KK3 526 aa20.05■□□□□ 0.8
CPNE1-203ENST00000397442 RAB5AP20339 215 aa20.04■□□□□ 0.8
CPNE1-203ENST00000397442 CTRLP40313 264 aa20.04■□□□□ 0.8
CPNE1-203ENST00000397442 DNLZQ5SXM8 178 aa20.04■□□□□ 0.8
CPNE1-203ENST00000397442 LYZL1Q6UWQ5 148 aa20.04■□□□□ 0.8
CPNE1-203ENST00000397442 ZMAT5Q9UDW3 170 aaKnown RBP20.04■□□□□ 0.8
CPNE1-203ENST00000397442 TP53TG3Q9ULZ0 132 aa20.04■□□□□ 0.8
CPNE1-203ENST00000397442 TPPP3Q9BW30 176 aa20.03■□□□□ 0.8
CPNE1-203ENST00000397442 MRPL54Q6P161 138 aaKnown RBP20.03■□□□□ 0.8
CPNE1-203ENST00000397442 CSNK1G2-AS1Q8NCQ2 148 aa20.03■□□□□ 0.8
CPNE1-203ENST00000397442 SSBP4Q9BWG4 385 aaPredicted RBP20.03■□□□□ 0.8
CPNE1-203ENST00000397442 KRTAP21-3Q3LHN1 58 aa20.02■□□□□ 0.8
CPNE1-203ENST00000397442 CSTL1Q9H114 145 aa20.02■□□□□ 0.8
CPNE1-203ENST00000397442 ARMS2P0C7Q2 107 aa20.01■□□□□ 0.79
CPNE1-203ENST00000397442 ASIPP42127 132 aa20.01■□□□□ 0.79
CPNE1-203ENST00000397442 C1QTNF4Q9BXJ3 329 aa20.01■□□□□ 0.79
CPNE1-203ENST00000397442 LOC102724200A0A096LPH7 203 aaPredicted RBP20■□□□□ 0.79
CPNE1-203ENST00000397442 A0A1B0GXF2 115 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 SNAI2O43623 268 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 IGHV4-30-4P0DP06 118 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 RNASE3P12724 160 aaKnown RBP20■□□□□ 0.79
CPNE1-203ENST00000397442 LINC00467Q9BRT7 94 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 DNAH3Q8TD57 4116 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 H3BVH4 76 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 PRM2P04554 102 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 OR5AL1P0C617 328 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 LINC01587Q99440 93 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 CNFNQ9BYD5 112 aa20■□□□□ 0.79
CPNE1-203ENST00000397442 IGHV3-16A0A0C4DH30 117 aa19.99■□□□□ 0.79
CPNE1-203ENST00000397442 MUC21A0A0G2JKD1 596 aa19.99■□□□□ 0.79
CPNE1-203ENST00000397442 MUC21A0A140T8X8 626 aa19.99■□□□□ 0.79
CPNE1-203ENST00000397442 A0A1B0GUT8 65 aa19.99■□□□□ 0.79
CPNE1-203ENST00000397442 ATP5L2Q7Z4Y8 100 aa19.99■□□□□ 0.79
CPNE1-203ENST00000397442 TMEM256Q8N2U0 113 aa19.99■□□□□ 0.79
CPNE1-203ENST00000397442 F2Z2F3 143 aa19.98■□□□□ 0.79
CPNE1-203ENST00000397442 SCRT2Q9NQ03 307 aa19.98■□□□□ 0.79
CPNE1-203ENST00000397442 MDFICQ9P1T7 246 aa19.98■□□□□ 0.79
CPNE1-203ENST00000397442 MED14OSP0DP75 135 aa19.97■□□□□ 0.79
CPNE1-203ENST00000397442 S100A4P26447 101 aaKnown RBP19.97■□□□□ 0.79
CPNE1-203ENST00000397442 RPS10P46783 165 aaKnown RBP19.97■□□□□ 0.79
CPNE1-203ENST00000397442 OR10AG1Q8NH19 301 aa19.97■□□□□ 0.79
CPNE1-203ENST00000397442 NOTCH1P46531 2555 aa19.96■□□□□ 0.79
CPNE1-203ENST00000397442 MGAM2Q2M2H8 2515 aa19.96■□□□□ 0.79
CPNE1-203ENST00000397442 KIR2DL5BA0A0G2JN68 375 aa19.96■□□□□ 0.79
CPNE1-203ENST00000397442 KIR2DL5BA0A0G2JPC4 375 aa19.96■□□□□ 0.79
CPNE1-203ENST00000397442 CBY3A6NI87 242 aa19.96■□□□□ 0.79
CPNE1-203ENST00000397442 HTN1P15515 57 aa19.96■□□□□ 0.79
CPNE1-203ENST00000397442 KIR2DL5AQ8N109 375 aa19.96■□□□□ 0.79
CPNE1-203ENST00000397442 KIR2DL5BQ8NHK3 375 aa19.96■□□□□ 0.79
CPNE1-203ENST00000397442 SPRY2O43597 315 aa19.95■□□□□ 0.78
CPNE1-203ENST00000397442 RASL11AQ6T310 242 aa19.95■□□□□ 0.78
CPNE1-203ENST00000397442 TMEM208Q9BTX3 173 aa19.95■□□□□ 0.78
CPNE1-203ENST00000397442 TIMM8BQ9Y5J9 83 aaPredicted RBP19.95■□□□□ 0.78
CPNE1-203ENST00000397442 NBEAL1Q6ZS30 2694 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 TRGV11A0A075B6L2 103 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 IGHV3OR16-12A0A075B7B8 117 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 SSTP61278 116 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 HBBP68871 147 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 ZNF705AQ6ZN79 300 aaPredicted RBP19.94■□□□□ 0.78
CPNE1-203ENST00000397442 C9orf85Q96MD7 179 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 MUC4Q99102 2169 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 A8MZ25 164 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 NTF3P20783 257 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 CAMPP49913 170 aa19.94■□□□□ 0.78
CPNE1-203ENST00000397442 RIGQ13278 110 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms