RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 CIDEAO60543 219 aa7.94□□□□□ -1.14
SYNE4-203ENST00000397428 SLC25A29Q8N8R3 303 aa7.94□□□□□ -1.14
SYNE4-203ENST00000397428 NMES1Q9C002 83 aa7.94□□□□□ -1.14
SYNE4-203ENST00000397428 OTORQ9NRC9 128 aa7.94□□□□□ -1.14
SYNE4-203ENST00000397428 TRAV21A0A0B4J279 112 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 TRBV6-4A0A1B0GX49 114 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 KRTAP29-1A8MX34 341 aaPredicted RBP7.93□□□□□ -1.14
SYNE4-203ENST00000397428 SIX6O95475 246 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 TYMSP04818 313 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 UBE2L3P68036 154 aaKnown RBP7.93□□□□□ -1.14
SYNE4-203ENST00000397428 DMRTA1Q5VZB9 504 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 NHLRC2Q8NBF2 726 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 KCNS1Q96KK3 526 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 MBD2Q9UBB5 411 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 NAGKQ9UJ70 344 aa7.93□□□□□ -1.14
SYNE4-203ENST00000397428 FBLL1A6NHQ2 334 aaKnown RBP7.92□□□□□ -1.14
SYNE4-203ENST00000397428 J3QL48 77 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 RS1O15537 224 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 PPT1P50897 306 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 TAS2R45P59539 299 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 KHDC3LQ587J8 217 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 FFAR4Q5NUL3 377 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 LELP1Q5T871 98 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 Q6ZSA8 131 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 PTH2Q96A98 100 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 HYLS1Q96M11 299 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 CCDC32Q9BV29 185 aa7.92□□□□□ -1.14
SYNE4-203ENST00000397428 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
SYNE4-203ENST00000397428 CYCSP99999 105 aaKnown RBP7.91□□□□□ -1.14
SYNE4-203ENST00000397428 ZNF876PQ49A33 203 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 OR10J3Q5JRS4 329 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 CFAP126Q5VTH2 177 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 MZT2BQ6NZ67 158 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 PRADC1Q9BSG0 188 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 GTSF1LQ9H1H1 148 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 Q9HAA7 133 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 SDF2L1Q9HCN8 221 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 TREM1Q9NP99 234 aa7.91□□□□□ -1.14
SYNE4-203ENST00000397428 IGHV3-30P01768 117 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 IGHV3-33P01772 117 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 IGHV3-30-3P0DP02 117 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 IGHV3-30-5P0DP03 117 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 ASAH1Q13510 395 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 LAGE3Q14657 143 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 LRRC37A5PQ49AS3 106 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 FAM74A1Q5RGS3 127 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 DPPA3Q6W0C5 159 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 GOLT1AQ6ZVE7 132 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 CMTM2Q8TAZ6 248 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 ASB13Q8WXK3 278 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 ATP5SQ99766 215 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 TM2D2Q9BX73 214 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 C11orf21Q9P2W6 132 aa7.9□□□□□ -1.14
SYNE4-203ENST00000397428 TRAV8-1A0A0A6YYK1 113 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 EIF3GO75821 320 aaKnown RBP eCLIP7.89□□□□□ -1.15
SYNE4-203ENST00000397428 ZNF80P51504 273 aaPredicted RBP7.89□□□□□ -1.15
SYNE4-203ENST00000397428 H2BFSP57053 126 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 WFDC2Q14508 124 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 RHOHQ15669 191 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 PQLC2Q6ZP29 291 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 LINC00299Q6ZSB3 139 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 ATP6V0E2Q8NHE4 81 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 SCGB1C1Q8TD33 95 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 DEFB104AQ8WTQ1 72 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 C9orf85Q96MD7 179 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 HSPB11Q9Y547 144 aa7.89□□□□□ -1.15
SYNE4-203ENST00000397428 PGPEP1LA6NFU8 196 aa7.88□□□□□ -1.15
SYNE4-203ENST00000397428 F6UZH7 168 aa7.88□□□□□ -1.15
SYNE4-203ENST00000397428 TAAR5O14804 337 aa7.88□□□□□ -1.15
SYNE4-203ENST00000397428 NDUFA13Q9P0J0 144 aa7.88□□□□□ -1.15
SYNE4-203ENST00000397428 TRAV8-3A0A0A6YYJ7 113 aa7.87□□□□□ -1.15
SYNE4-203ENST00000397428 MGST1P10620 155 aaKnown RBP7.87□□□□□ -1.15
SYNE4-203ENST00000397428 LINC00528Q8N1L1 170 aa7.87□□□□□ -1.15
SYNE4-203ENST00000397428 PPP1R1CQ8WVI7 109 aa7.87□□□□□ -1.15
SYNE4-203ENST00000397428 WFDC1Q9HC57 220 aa7.87□□□□□ -1.15
SYNE4-203ENST00000397428 RPH3ALQ9UNE2 315 aa7.87□□□□□ -1.15
SYNE4-203ENST00000397428 IGHV3-73A0A0B4J1V6 119 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 SERTM2A0A1B0GWG4 89 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 A0A1W2PPV4 95 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 MPC2O95563 127 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 IGLV2-11P01706 119 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 RNASE3P12724 160 aaKnown RBP7.86□□□□□ -1.15
SYNE4-203ENST00000397428 RPL12P30050 165 aaKnown RBP7.86□□□□□ -1.15
SYNE4-203ENST00000397428 GNG5P63218 68 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 ACOT6Q3I5F7 207 aaPredicted RBP7.86□□□□□ -1.15
SYNE4-203ENST00000397428 ZNF506Q5JVG8 444 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 Q8N3U1 123 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 SUN5Q8TC36 379 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 SGK494Q96LW2 274 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 SH3BGRL3Q9H299 93 aa7.86□□□□□ -1.15
SYNE4-203ENST00000397428 RNF222A6NCQ9 220 aa7.85□□□□□ -1.15
SYNE4-203ENST00000397428 LINC00694P0DN24 101 aa7.85□□□□□ -1.15
SYNE4-203ENST00000397428 KRTAP10-4P60372 401 aaPredicted RBP7.85□□□□□ -1.15
SYNE4-203ENST00000397428 PIK3CD-AS1Q5SR53 167 aa7.85□□□□□ -1.15
SYNE4-203ENST00000397428 ZFP2Q6ZN57 461 aa7.85□□□□□ -1.15
SYNE4-203ENST00000397428 DAZ4Q86SG3 579 aaKnown RBP7.85□□□□□ -1.15
SYNE4-203ENST00000397428 SMIM3Q9BZL3 60 aa7.85□□□□□ -1.15
SYNE4-203ENST00000397428 DAZ3Q9NR90 486 aaKnown RBP7.85□□□□□ -1.15
SYNE4-203ENST00000397428 Q9UF83 564 aa7.85□□□□□ -1.15
SYNE4-203ENST00000397428 GCGP01275 180 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms