RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 LINC00587B1AMM8 73 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 ZNF324O75467 553 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-207ENST00000397200 IGLC6P0CF74 106 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 INSL3P51460 131 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 ERCC8Q13216 396 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 DEFB114Q30KQ6 69 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 ZNF493Q6ZR52 646 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
CAPN3-207ENST00000397200 ZNF138P52744 262 aa11.16□□□□□ -0.62
CAPN3-207ENST00000397200 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
CAPN3-207ENST00000397200 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
CAPN3-207ENST00000397200 SAMD10Q9BYL1 202 aa11.16□□□□□ -0.62
CAPN3-207ENST00000397200 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
CAPN3-207ENST00000397200 IGLV1-51P01701 117 aa11.15□□□□□ -0.62
CAPN3-207ENST00000397200 CD300EQ496F6 205 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-207ENST00000397200 C16orf92Q96LL3 132 aa11.15□□□□□ -0.62
CAPN3-207ENST00000397200 C20orf173Q96LM9 149 aa11.15□□□□□ -0.62
CAPN3-207ENST00000397200 CNFNQ9BYD5 112 aa11.15□□□□□ -0.62
CAPN3-207ENST00000397200 IGKV3-7A0A075B6H7 116 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 FABP5P3A8MUU1 101 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 IGLL1P15814 213 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 PKIAP61925 76 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-207ENST00000397200 TMEM61Q8N0U2 210 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 BORCS7Q96B45 105 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 URB1-AS1Q96HZ7 61 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 NAGKQ9UJ70 344 aa11.14□□□□□ -0.63
CAPN3-207ENST00000397200 TRAV25A0A0B4J276 109 aa11.13□□□□□ -0.63
CAPN3-207ENST00000397200 AMTP48728 403 aa11.13□□□□□ -0.63
CAPN3-207ENST00000397200 TMEM78Q5T7P6 136 aa11.13□□□□□ -0.63
CAPN3-207ENST00000397200 LYZL1Q6UWQ5 148 aa11.13□□□□□ -0.63
CAPN3-207ENST00000397200 NIT1Q86X76 327 aa11.13□□□□□ -0.63
CAPN3-207ENST00000397200 NRN1Q9NPD7 142 aa11.13□□□□□ -0.63
CAPN3-207ENST00000397200 MS4A6AQ9H2W1 248 aa11.13□□□□□ -0.63
CAPN3-207ENST00000397200 FER1L6-AS1Q8NA97 138 aa11.12□□□□□ -0.63
CAPN3-207ENST00000397200 CHCHD1Q96BP2 118 aaKnown RBP11.12□□□□□ -0.63
CAPN3-207ENST00000397200 TMSB15BA0A087X1C1 80 aa11.11□□□□□ -0.63
CAPN3-207ENST00000397200 PMCHP20382 165 aa11.11□□□□□ -0.63
CAPN3-207ENST00000397200 TFPI2P48307 235 aa11.11□□□□□ -0.63
CAPN3-207ENST00000397200 SAMD13Q5VXD3 122 aa11.11□□□□□ -0.63
CAPN3-207ENST00000397200 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
CAPN3-207ENST00000397200 WFDC3Q8IUB2 231 aa11.11□□□□□ -0.63
CAPN3-207ENST00000397200 Q8N976 141 aa11.11□□□□□ -0.63
CAPN3-207ENST00000397200 LINC00477Q96M19 166 aa11.11□□□□□ -0.63
CAPN3-207ENST00000397200 SPAG8Q99932 426 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-207ENST00000397200 TRBV7-9A0A0J9YWB2 115 aa11.1□□□□□ -0.63
CAPN3-207ENST00000397200 TSTD3H0UI37 97 aa11.1□□□□□ -0.63
CAPN3-207ENST00000397200 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
CAPN3-207ENST00000397200 ZNF664Q8N3J9 261 aa11.1□□□□□ -0.63
CAPN3-207ENST00000397200 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
CAPN3-207ENST00000397200 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
CAPN3-207ENST00000397200 U3KQK5 164 aa11.1□□□□□ -0.63
CAPN3-207ENST00000397200 KIR2DL5BA0A0G2JN68 375 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 KIR2DL5BA0A0G2JPC4 375 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 WIPF1O43516 503 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 HSBP1O75506 76 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 CTAG1AP78358 180 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 APRG1Q8IVJ8 170 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 KIR2DL5AQ8N109 375 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 DCANP1Q8TF63 244 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 C11orf21Q9P2W6 132 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 NOTCH3Q9UM47 2321 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 TRAV2A0A0B4J234 112 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 IGKV3D-20A0A0C4DH25 116 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 OR4C46A6NHA9 309 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 OXLD1Q5BKU9 147 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 FAM104BQ5XKR9 115 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
CAPN3-207ENST00000397200 K7EQG2 157 aa11.08□□□□□ -0.64
CAPN3-207ENST00000397200 ORM1P02763 201 aa11.08□□□□□ -0.64
CAPN3-207ENST00000397200 ID1P41134 155 aa11.08□□□□□ -0.64
CAPN3-207ENST00000397200 RNASEKQ6P5S7 137 aaKnown RBP11.08□□□□□ -0.64
CAPN3-207ENST00000397200 FAM19A2Q8N3H0 131 aa11.08□□□□□ -0.64
CAPN3-207ENST00000397200 ZFAND2AQ8N6M9 145 aa11.08□□□□□ -0.64
CAPN3-207ENST00000397200 PRR9Q5T870 116 aa11.07□□□□□ -0.64
CAPN3-207ENST00000397200 OR10J6PQ8NGY7 276 aa11.07□□□□□ -0.64
CAPN3-207ENST00000397200 TMEM191AQ9H0A3 160 aa11.07□□□□□ -0.64
CAPN3-207ENST00000397200 CMYA5Q8N3K9 4069 aa11.07□□□□□ -0.64
CAPN3-207ENST00000397200 PKD1L1Q8TDX9 2849 aa11.07□□□□□ -0.64
CAPN3-207ENST00000397200 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 DDTP30046 118 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 SNRPD3P62318 126 aaKnown RBP11.06□□□□□ -0.64
CAPN3-207ENST00000397200 OR8A1Q8NGG7 326 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 PRO1933Q9H354 126 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 ZNF256Q9Y2P7 627 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-207ENST00000397200 M0R2Z0 102 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 LINC00614P0C842 121 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 RAB4AP20338 218 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 NTF3P20783 257 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 KRTDAPP60985 99 aa11.06□□□□□ -0.64
CAPN3-207ENST00000397200 IGHV4-4A0A075B6R2 117 aa11.05□□□□□ -0.64
CAPN3-207ENST00000397200 IGHV1-24A0A0C4DH33 117 aa11.05□□□□□ -0.64
CAPN3-207ENST00000397200 SNAI2O43623 268 aa11.05□□□□□ -0.64
CAPN3-207ENST00000397200 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
CAPN3-207ENST00000397200 ZNF688P0C7X2 276 aa11.05□□□□□ -0.64
CAPN3-207ENST00000397200 ZNF705DP0CH99 300 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-207ENST00000397200 ZNF705BP0CI00 300 aaPredicted RBP11.05□□□□□ -0.64
CAPN3-207ENST00000397200 BEAN1Q3B7T3 259 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms