RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 J3KRW8 73 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 C12orf74Q32Q52 190 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 S100A7AQ86SG5 101 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 KLK15Q9H2R5 256 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 IGHV4-4A0A075B6R2 117 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 CCL21O00585 134 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 RASL10AQ92737 203 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 PRO0461Q9UI25 63 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 MUC4Q99102 2169 aa10.59□□□□□ -0.71
NUP98-204ENST00000397004 U3KQE9 123 aa10.58□□□□□ -0.72
NUP98-204ENST00000397004 ATP5LO75964 103 aa10.58□□□□□ -0.72
NUP98-204ENST00000397004 UCNP55089 124 aa10.58□□□□□ -0.72
NUP98-204ENST00000397004 FBXL19-AS1Q494R0 122 aa10.58□□□□□ -0.72
NUP98-204ENST00000397004 FOXI2Q6ZQN5 318 aa10.58□□□□□ -0.72
NUP98-204ENST00000397004 COL6A6A6NMZ7 2263 aa10.58□□□□□ -0.72
NUP98-204ENST00000397004 TRBV12-3P01733 135 aa10.57□□□□□ -0.72
NUP98-204ENST00000397004 C9orf47Q6ZRZ4 202 aa10.57□□□□□ -0.72
NUP98-204ENST00000397004 MORN3Q6PF18 240 aaPredicted RBP10.57□□□□□ -0.72
NUP98-204ENST00000397004 SPTAN1Q13813 2472 aaKnown RBP10.57□□□□□ -0.72
NUP98-204ENST00000397004 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
NUP98-204ENST00000397004 SRSF1Q07955 248 aaKnown RBP eCLIP10.56□□□□□ -0.722e-9■■□□□ 12.6
NUP98-204ENST00000397004 ZFAND2AQ8N6M9 145 aa10.56□□□□□ -0.72
NUP98-204ENST00000397004 GTSF1LQ9H1H1 148 aa10.56□□□□□ -0.72
NUP98-204ENST00000397004 SMPXQ9UHP9 88 aa10.56□□□□□ -0.72
NUP98-204ENST00000397004 HLA-DRB4P13762 266 aa10.56□□□□□ -0.72
NUP98-204ENST00000397004 SAA4P35542 130 aa10.56□□□□□ -0.72
NUP98-204ENST00000397004 CCDC144NLQ6NUI1 221 aa10.56□□□□□ -0.72
NUP98-204ENST00000397004 ITLN2Q8WWU7 325 aaPredicted RBP10.56□□□□□ -0.72
NUP98-204ENST00000397004 HLA-DRB4X5D2U9 266 aa10.56□□□□□ -0.72
NUP98-204ENST00000397004 ITPR1Q14643 2758 aa10.56□□□□□ -0.72
NUP98-204ENST00000397004 C1orf122Q6ZSJ8 110 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 NEXN-AS1Q8NBZ9 246 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 ETDBQ3ZM63 59 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 SPANXN1Q5VSR9 72 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 SPAG8Q99932 426 aaPredicted RBP10.55□□□□□ -0.72
NUP98-204ENST00000397004 SMIM2Q9BVW6 85 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 TMEM78Q5T7P6 136 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 TMEM219Q86XT9 240 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 MYOZ3Q8TDC0 251 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 SLC50A1Q9BRV3 221 aa10.55□□□□□ -0.72
NUP98-204ENST00000397004 AZU1P20160 251 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 MINOS1Q5TGZ0 78 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 SPOCK3Q9BQ16 436 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 MINOS1-NBL1R4GNA1 71 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 F6UB75 175 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 PLEKHB2Q96CS7 222 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 TIMD4Q96H15 378 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 TSSC4Q9Y5U2 329 aaPredicted RBP10.54□□□□□ -0.72
NUP98-204ENST00000397004 HIVEP3Q5T1R4 2406 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 CRYGDP07320 174 aa10.54□□□□□ -0.72
NUP98-204ENST00000397004 A0A1B0GWB2 263 aa10.53□□□□□ -0.72
NUP98-204ENST00000397004 M0R381 172 aa10.53□□□□□ -0.72
NUP98-204ENST00000397004 LGALS1P09382 135 aaKnown RBP10.53□□□□□ -0.72
NUP98-204ENST00000397004 C14orf178Q8N769 122 aaPredicted RBP10.53□□□□□ -0.72
NUP98-204ENST00000397004 F8VRH5 84 aa10.53□□□□□ -0.72
NUP98-204ENST00000397004 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
NUP98-204ENST00000397004 GLMPQ8WWB7 406 aa10.53□□□□□ -0.72
NUP98-204ENST00000397004 CENPVL3A0A0U1RRI6 287 aa10.53□□□□□ -0.72
NUP98-204ENST00000397004 TSHBP01222 138 aa10.53□□□□□ -0.72
NUP98-204ENST00000397004 TOMM6Q96B49 74 aa10.53□□□□□ -0.72
NUP98-204ENST00000397004 CYSLTR1Q9Y271 337 aa10.53□□□□□ -0.72
NUP98-204ENST00000397004 OOSP1A8MZH6 123 aa10.52□□□□□ -0.72
NUP98-204ENST00000397004 GNRH2O43555 120 aa10.52□□□□□ -0.72
NUP98-204ENST00000397004 EDN2P20800 178 aa10.52□□□□□ -0.72
NUP98-204ENST00000397004 C19orf54Q5BKX5 351 aa10.52□□□□□ -0.72
NUP98-204ENST00000397004 BAALCQ8WXS3 180 aa10.52□□□□□ -0.72
NUP98-204ENST00000397004 HIST1H4GQ99525 98 aa10.52□□□□□ -0.72
NUP98-204ENST00000397004 SOCS3O14543 225 aa10.52□□□□□ -0.73
NUP98-204ENST00000397004 KLHL30-AS1Q8NEE0 82 aa10.52□□□□□ -0.73
NUP98-204ENST00000397004 COX6B1P14854 86 aa10.52□□□□□ -0.73
NUP98-204ENST00000397004 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.73
NUP98-204ENST00000397004 RRN3P1Q2M238 152 aa10.52□□□□□ -0.73
NUP98-204ENST00000397004 C5orf56Q8N8D9 126 aa10.52□□□□□ -0.73
NUP98-204ENST00000397004 TRAV12-1A0A0B4J245 112 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 H7C1H1 209 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
NUP98-204ENST00000397004 PLNP26678 52 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 ATP5G2Q06055 141 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 SMAGPQ0VAQ4 97 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 IGHV3OR16-10A0A075B7F0 116 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 LINC00315P59091 139 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 JPT2Q9H910 190 aa10.51□□□□□ -0.73
NUP98-204ENST00000397004 UBE2E1P51965 193 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 ANXA2RQ3ZCQ2 193 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 SFTA2Q6UW10 78 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 METTL26Q96S19 204 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 CHTOPQ9Y3Y2 248 aaKnown RBP10.5□□□□□ -0.73
NUP98-204ENST00000397004 F8W1H4 67 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 EMP1P54849 157 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 KLRB1Q12918 225 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 FHL3Q13643 280 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 MRPL53Q96EL3 112 aaKnown RBP10.5□□□□□ -0.73
NUP98-204ENST00000397004 C16orf92Q96LL3 132 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 SCGB3A1Q96QR1 104 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 PRORYQ9H606 182 aa10.5□□□□□ -0.73
NUP98-204ENST00000397004 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms