RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 SPATA12Q7Z6I5 190 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 OR9G4Q8NGQ1 327 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 C17orf77Q96MU5 243 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 PEMTQ9UBM1 199 aa11.23□□□□□ -0.61
TM9SF1-202ENST00000396854 LINC00614P0C842 121 aa11.22□□□□□ -0.61
TM9SF1-202ENST00000396854 TSPOP30536 169 aa11.22□□□□□ -0.61
TM9SF1-202ENST00000396854 PSG8Q9UQ74 426 aa11.22□□□□□ -0.61
TM9SF1-202ENST00000396854 A0A1B0GUT8 65 aa11.21□□□□□ -0.61
TM9SF1-202ENST00000396854 M0QZ24 198 aa11.21□□□□□ -0.61
TM9SF1-202ENST00000396854 RPL7P18124 248 aaKnown RBP11.21□□□□□ -0.61
TM9SF1-202ENST00000396854 PDE6HQ13956 83 aa11.21□□□□□ -0.61
TM9SF1-202ENST00000396854 SMPXQ9UHP9 88 aa11.21□□□□□ -0.61
TM9SF1-202ENST00000396854 WNK1Q9H4A3 2382 aa11.21□□□□□ -0.62
TM9SF1-202ENST00000396854 A0A1B0GW15 77 aa11.21□□□□□ -0.62
TM9SF1-202ENST00000396854 OVOL1O14753 267 aa11.21□□□□□ -0.62
TM9SF1-202ENST00000396854 PF4P02776 101 aa11.21□□□□□ -0.62
TM9SF1-202ENST00000396854 OR5AL1P0C617 328 aa11.21□□□□□ -0.62
TM9SF1-202ENST00000396854 IGLL1P15814 213 aa11.21□□□□□ -0.62
TM9SF1-202ENST00000396854 LINC00482Q8N8I6 264 aa11.21□□□□□ -0.62
TM9SF1-202ENST00000396854 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.62
TM9SF1-202ENST00000396854 SYS1-DBNDD2H3BUS1 97 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 EDN2P20800 178 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 RIGQ13278 110 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 Q6AWC8 147 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 STPG4Q8N801 248 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 COL6A5A8TX70 2615 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 IGHV3-49A0A0A0MS15 119 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 LEPROTL1O95214 131 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 BMI1P35226 326 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 TFPI2P48307 235 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 RHPN1-AS1Q9BWJ2 59 aa11.2□□□□□ -0.62
TM9SF1-202ENST00000396854 CSN3P07498 182 aa11.19□□□□□ -0.62
TM9SF1-202ENST00000396854 NPSP0C0P6 89 aa11.19□□□□□ -0.62
TM9SF1-202ENST00000396854 ARMS2P0C7Q2 107 aa11.19□□□□□ -0.62
TM9SF1-202ENST00000396854 GLMPQ8WWB7 406 aa11.19□□□□□ -0.62
TM9SF1-202ENST00000396854 MDFIQ99750 246 aa11.19□□□□□ -0.62
TM9SF1-202ENST00000396854 SIGLEC8Q9NYZ4 499 aa11.19□□□□□ -0.62
TM9SF1-202ENST00000396854 IGHV3OR16-13A0A075B7E8 117 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 IGHV3-74A0A0B4J1X5 117 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 IGHV3-66A0A0C4DH42 116 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 SERTM2A0A1B0GWG4 89 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 OR4C46A6NHA9 309 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 CRIP1P50238 77 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 STAB1Q9NY15 2570 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 A0A087X0K7 114 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 AAMDCQ9H7C9 122 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 ST20Q9HBF5 79 aa11.18□□□□□ -0.62
TM9SF1-202ENST00000396854 M0R3E3 92 aa11.17□□□□□ -0.62
TM9SF1-202ENST00000396854 ARL6IP6Q8N6S5 226 aa11.17□□□□□ -0.62
TM9SF1-202ENST00000396854 PSG9Q00887 426 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 PET117Q6UWS5 81 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 COX8CQ7Z4L0 72 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 ZNF493Q6ZR52 646 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 ASCL2Q99929 193 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 MAP1LC3CQ9BXW4 147 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 SMAD5-AS1Q9Y6J3 95 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 ANK2Q01484 3957 aa11.16□□□□□ -0.62
TM9SF1-202ENST00000396854 CSN1S1P47710 185 aa11.15□□□□□ -0.62
TM9SF1-202ENST00000396854 C8orf49Q96NF6 230 aa11.15□□□□□ -0.62
TM9SF1-202ENST00000396854 HINT1P49773 126 aaPredicted RBP11.15□□□□□ -0.63
TM9SF1-202ENST00000396854 ZNF138P52744 262 aa11.15□□□□□ -0.63
TM9SF1-202ENST00000396854 FBLL1A6NHQ2 334 aaKnown RBP11.14□□□□□ -0.63
TM9SF1-202ENST00000396854 KRTAP21-3Q3LHN1 58 aa11.14□□□□□ -0.63
TM9SF1-202ENST00000396854 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
TM9SF1-202ENST00000396854 VWFP04275 2813 aa11.13□□□□□ -0.63
TM9SF1-202ENST00000396854 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
TM9SF1-202ENST00000396854 DYNLRB2Q8TF09 96 aa11.13□□□□□ -0.63
TM9SF1-202ENST00000396854 AP5S1Q9NUS5 200 aa11.13□□□□□ -0.63
TM9SF1-202ENST00000396854 SH2D1AO60880 128 aa11.13□□□□□ -0.63
TM9SF1-202ENST00000396854 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
TM9SF1-202ENST00000396854 hDV102S1A0JD36 115 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 TMEM189A5PLL7 270 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 PRB4P10163 310 aaPredicted RBP11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 LINC01545Q5VT33 79 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 SPATA3Q8NHX4 192 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 SLC50A1Q9BRV3 221 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 U3KQK5 164 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 SAP30O75446 220 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 LYZL1Q6UWQ5 148 aa11.12□□□□□ -0.63
TM9SF1-202ENST00000396854 TRRAPQ9Y4A5 3859 aa11.11□□□□□ -0.63
TM9SF1-202ENST00000396854 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
TM9SF1-202ENST00000396854 FA2HQ7L5A8 372 aa11.11□□□□□ -0.63
TM9SF1-202ENST00000396854 PRR25Q96S07 402 aa11.11□□□□□ -0.63
TM9SF1-202ENST00000396854 MCRIP2Q9BUT9 160 aaKnown RBP11.11□□□□□ -0.63
TM9SF1-202ENST00000396854 TPPP3Q9BW30 176 aa11.11□□□□□ -0.63
TM9SF1-202ENST00000396854 MS4A6AQ9H2W1 248 aa11.11□□□□□ -0.63
TM9SF1-202ENST00000396854 IGKV2-40A0A087WW87 121 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 TRAV25A0A0B4J276 109 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 IGKV2D-40P01614 121 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 INSL3P51460 131 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 FAM104BQ5XKR9 115 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms