RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ZNRF2Q8NHG8 242 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 CD177Q8N6Q3 437 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 A0A0B4J2C4 111 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 NDUFB8O95169 186 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 C8orf86Q6ZUL3 223 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 IGF2BP2-AS1Q96M15 143 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 Q9H8V8 135 aa8.31□□□□□ -1.08
COL4A4-201ENST00000396625 B4DSR2 109 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 CR1LQ2VPA4 569 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 IGHV1OR15-1A0A075B7D0 117 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 RAI1Q7Z5J4 1906 aaPredicted RBP8.3□□□□□ -1.08
COL4A4-201ENST00000396625 ZNF672Q499Z4 452 aaPredicted RBP8.3□□□□□ -1.08
COL4A4-201ENST00000396625 ZFP2Q6ZN57 461 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 WIPF2Q8TF74 440 aaPredicted RBP8.3□□□□□ -1.08
COL4A4-201ENST00000396625 IGKV1-16P04430 117 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 C20orf204Q6ZNR8 217 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 C3orf56Q8N813 242 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 TMEM14BQ9NUH8 114 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 PTPRSQ13332 1948 aa8.3□□□□□ -1.08
COL4A4-201ENST00000396625 SAA4P35542 130 aa8.29□□□□□ -1.08
COL4A4-201ENST00000396625 NREPQ16612 68 aa8.29□□□□□ -1.08
COL4A4-201ENST00000396625 NDUFS7O75251 213 aa8.29□□□□□ -1.08
COL4A4-201ENST00000396625 RNF183Q96D59 192 aa8.29□□□□□ -1.08
COL4A4-201ENST00000396625 TIRAPP58753 221 aa8.29□□□□□ -1.08
COL4A4-201ENST00000396625 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
COL4A4-201ENST00000396625 CFC1P0CG37 223 aa8.29□□□□□ -1.08
COL4A4-201ENST00000396625 SP7Q8TDD2 431 aaPredicted RBP8.29□□□□□ -1.08
COL4A4-201ENST00000396625 DYNAPQ8N1N2 210 aa8.29□□□□□ -1.08
COL4A4-201ENST00000396625 CRYGBP07316 175 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 ZC2HC1AQ96GY0 325 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 IGHV2-70DA0A0C4DH43 119 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 EFNA4P52798 201 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 DUX4L9Q6RFH8 374 aaPredicted RBP8.28□□□□□ -1.08
COL4A4-201ENST00000396625 MESP1Q9BRJ9 268 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 A0A096LPF7 62 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 IGKV1-12A0A0C4DH73 117 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 K7ERS5 55 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 PSPNO60542 156 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 IGKV1D-12P01611 117 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 EFNA2O43921 213 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 LINC01356Q8N9X3 169 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 DKK2Q9UBU2 259 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 LINC01619G3V211 115 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 A0A0U1RQV1 116 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 IGKV4-1P06312 121 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
COL4A4-201ENST00000396625 RHOHQ15669 191 aa8.27□□□□□ -1.08
COL4A4-201ENST00000396625 IGLV3-32A0A0A0MS00 114 aa8.27□□□□□ -1.08
COL4A4-201ENST00000396625 WIPF3A6NGB9 483 aa8.27□□□□□ -1.08
COL4A4-201ENST00000396625 MPLKIPQ8TAP9 179 aa8.27□□□□□ -1.08
COL4A4-201ENST00000396625 GAFA1Q96PS6 74 aa8.27□□□□□ -1.08
COL4A4-201ENST00000396625 V9GYV3 84 aa8.27□□□□□ -1.08
COL4A4-201ENST00000396625 C9orf47Q6ZRZ4 202 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 C20orf78Q9BR46 151 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 TRBV19A0A075B6N1 114 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 CRYGSP22914 178 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 ETV2O00321 342 aaPredicted RBP8.27□□□□□ -1.09
COL4A4-201ENST00000396625 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 SH2D6Q7Z4S9 175 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 DEFB125Q8N687 156 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 IGLC7A0M8Q6 106 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 TEX36Q5VZQ5 186 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 V9GYY9 64 aa8.27□□□□□ -1.09
COL4A4-201ENST00000396625 ZNF462Q96JM2 2506 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 ZNF503Q96F45 646 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 E9PLN8 166 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 TEN1Q86WV5 123 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 TTC28Q96AY4 2481 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 TRBV6-6A0A0A6YYG2 114 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 TRAV4A0A0B4J268 109 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 MST1P26927 711 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 OPRPNQ99935 248 aaPredicted RBP8.26□□□□□ -1.09
COL4A4-201ENST00000396625 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 A0A087WW49 117 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 HERV-K104P63124 156 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 FOXE3Q13461 319 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 LINC01620Q4KN68 170 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 BUB3O43684 328 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 ZNF883P0CG24 379 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 IGKV1OR2-108A0A075B7D4 117 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 IGLL5B9A064 214 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 PYGO2Q9BRQ0 406 aa8.26□□□□□ -1.09
COL4A4-201ENST00000396625 TMEM61Q8N0U2 210 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 K7EMI3 77 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 FOXI2Q6ZQN5 318 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 LRRK2Q5S007 2527 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 MBD3L4A6NDZ8 208 aaPredicted RBP8.25□□□□□ -1.09
COL4A4-201ENST00000396625 MBD3L3A6NE82 208 aaPredicted RBP8.25□□□□□ -1.09
COL4A4-201ENST00000396625 MBD3L5A6NJ08 208 aaPredicted RBP8.25□□□□□ -1.09
COL4A4-201ENST00000396625 Q6ZQT7 251 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 PCP2Q8IVA1 136 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 MBD3L2Q8NHZ7 208 aaPredicted RBP8.25□□□□□ -1.09
COL4A4-201ENST00000396625 Q6P435 159 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 ATP6V0E2Q8NHE4 81 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 ATP6V0E1O15342 81 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 IGHV2-5P01817 119 aa8.25□□□□□ -1.09
COL4A4-201ENST00000396625 MRPL36Q9P0J6 103 aaKnown RBP8.25□□□□□ -1.09
COL4A4-201ENST00000396625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
COL4A4-201ENST00000396625 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms