RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 KLKP1Q107X0 134 aa0.03□□□□□ -2.4
CMC1-202ENST00000396610 OTOSQ8NHW6 89 aa0.03□□□□□ -2.4
CMC1-202ENST00000396610 V9GYQ6 96 aa0.03□□□□□ -2.4
CMC1-202ENST00000396610 A2MP01023 1474 aa0.03□□□□□ -2.41
CMC1-202ENST00000396610 ANK2Q01484 3957 aa0.03□□□□□ -2.41
CMC1-202ENST00000396610 NCOR2Q9Y618 2525 aa0.03□□□□□ -2.41
CMC1-202ENST00000396610 A0A096LNT2 108 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 A0A1B0GV72 72 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 UQCRQO14949 82 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 IFNA21P01568 189 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 FABP1P07148 127 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 TMEM128Q5BJH2 165 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 UNQ5815/PRO19632Q6UWF5 114 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 VMO1Q7Z5L0 202 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 F8P00451 2351 aa0.02□□□□□ -2.41
CMC1-202ENST00000396610 PGRMC1O00264 195 aaKnown RBP0.01□□□□□ -2.41
CMC1-202ENST00000396610 SLC25A5P05141 298 aaKnown RBP0.01□□□□□ -2.41
CMC1-202ENST00000396610 Q5XG85 94 aa0.01□□□□□ -2.41
CMC1-202ENST00000396610 TMEM35BQ8NCS4 154 aa0.01□□□□□ -2.41
CMC1-202ENST00000396610 CCDC115Q96NT0 180 aa0.01□□□□□ -2.41
CMC1-202ENST00000396610 CENPHQ9H3R5 247 aa0.01□□□□□ -2.41
CMC1-202ENST00000396610 PROK2Q9HC23 129 aa0.01□□□□□ -2.41
CMC1-202ENST00000396610 SMPXQ9UHP9 88 aa0.01□□□□□ -2.41
CMC1-202ENST00000396610 ESPL1Q14674 2120 aa0.01□□□□□ -2.41
CMC1-202ENST00000396610 LRP1Q07954 4544 aaKnown RBP0.01□□□□□ -2.41
CMC1-202ENST00000396610 SSPOA2VEC9 5147 aa0□□□□□ -2.41
CMC1-202ENST00000396610 PCBD1P61457 104 aa0□□□□□ -2.41
CMC1-202ENST00000396610 ABCA4P78363 2273 aa0□□□□□ -2.41
CMC1-202ENST00000396610 SAMD13Q5VXD3 122 aa0□□□□□ -2.41
CMC1-202ENST00000396610 TOMM20LQ6UXN7 152 aa0□□□□□ -2.41
CMC1-202ENST00000396610 NUP210Q8TEM1 1887 aaPredicted RBP-0.01□□□□□ -2.41
CMC1-202ENST00000396610 CPDO75976 1380 aa-0.01□□□□□ -2.41
CMC1-202ENST00000396610 MPC1LP0DKB6 136 aa-0.01□□□□□ -2.41
CMC1-202ENST00000396610 ADCYAP1P18509 176 aa-0.01□□□□□ -2.41
CMC1-202ENST00000396610 SDC4P31431 198 aa-0.01□□□□□ -2.41
CMC1-202ENST00000396610 POLR2JP52435 117 aaKnown RBP-0.01□□□□□ -2.41
CMC1-202ENST00000396610 TFAMQ00059 246 aaKnown RBP-0.01□□□□□ -2.41
CMC1-202ENST00000396610 OR4S1Q8NGB4 309 aa-0.01□□□□□ -2.41
CMC1-202ENST00000396610 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
CMC1-202ENST00000396610 BCORL1Q5H9F3 1711 aa-0.01□□□□□ -2.41
CMC1-202ENST00000396610 HRNRQ86YZ3 2850 aaPredicted RBP-0.02□□□□□ -2.41
CMC1-202ENST00000396610 TRBV10-1A0A0K0K1A3 114 aa-0.02□□□□□ -2.41
CMC1-202ENST00000396610 PNMA8CA0A1B0GUJ8 204 aa-0.02□□□□□ -2.41
CMC1-202ENST00000396610 SPINK1P00995 79 aa-0.02□□□□□ -2.41
CMC1-202ENST00000396610 TCRAP04437 139 aa-0.02□□□□□ -2.41
CMC1-202ENST00000396610 PSPHP78330 225 aa-0.02□□□□□ -2.41
CMC1-202ENST00000396610 ANK1P16157 1881 aa-0.02□□□□□ -2.41
CMC1-202ENST00000396610 KIAA1549LQ6ZVL6 1849 aa-0.02□□□□□ -2.41
CMC1-202ENST00000396610 POLQO75417 2590 aa-0.02□□□□□ -2.41
CMC1-202ENST00000396610 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.03□□□□□ -2.41
CMC1-202ENST00000396610 TRPM7Q96QT4 1865 aa-0.03□□□□□ -2.41
CMC1-202ENST00000396610 S100GP29377 79 aa-0.03□□□□□ -2.41
CMC1-202ENST00000396610 DSCR8Q96T75 97 aa-0.03□□□□□ -2.41
CMC1-202ENST00000396610 USP54Q70EL1 1684 aa-0.03□□□□□ -2.41
CMC1-202ENST00000396610 MED23Q9ULK4 1368 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 TRAV17A0A0B4J275 112 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 C9JAW5 83 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 APOC1P02654 83 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 HIST1H1BP16401 226 aaKnown RBP-0.04□□□□□ -2.42
CMC1-202ENST00000396610 S100A5P33763 92 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 Q5BKY6 102 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 TMEM141Q96I45 108 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 COA4Q9NYJ1 87 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 METTL1Q9UBP6 276 aaKnown RBP-0.04□□□□□ -2.42
CMC1-202ENST00000396610 UNC79Q9P2D8 2635 aa-0.04□□□□□ -2.42
CMC1-202ENST00000396610 ASXL3Q9C0F0 2248 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.05□□□□□ -2.42
CMC1-202ENST00000396610 ANKRD31Q8N7Z5 1873 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 TEX49A0A1B0GTD5 131 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 OR2H2O95918 312 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 RPS28P62857 69 aaKnown RBP-0.05□□□□□ -2.42
CMC1-202ENST00000396610 HSD17B12Q53GQ0 312 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 PPP1R1CQ8WVI7 109 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 VPS25Q9BRG1 176 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 CACNA1CQ13936 2221 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 ATG2AQ2TAZ0 1938 aa-0.05□□□□□ -2.42
CMC1-202ENST00000396610 ANKRD17O75179 2603 aaKnown RBP-0.05□□□□□ -2.42
CMC1-202ENST00000396610 BLMP54132 1417 aaPredicted RBP-0.05□□□□□ -2.42
CMC1-202ENST00000396610 UBR5O95071 2799 aaPredicted RBP-0.06□□□□□ -2.42
CMC1-202ENST00000396610 MCRIP1C9JLW8 97 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 TFF1P04155 84 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 PLGLB1Q02325 96 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 SLC25A26Q70HW3 274 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 SKA2Q8WVK7 121 aaPredicted RBP-0.06□□□□□ -2.42
CMC1-202ENST00000396610 PPDPFLQ8WWR9 84 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 DDA1Q9BW61 102 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 BET1LQ9NYM9 111 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 CALML5Q9NZT1 146 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 PTPRGP23470 1445 aa-0.06□□□□□ -2.42
CMC1-202ENST00000396610 RBBP6Q7Z6E9 1792 aaKnown RBP-0.06□□□□□ -2.42
CMC1-202ENST00000396610 CDK12Q9NYV4 1490 aaPredicted RBP-0.07□□□□□ -2.42
CMC1-202ENST00000396610 CXorf51AA0A1B0GTR3 108 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 DPM2O94777 84 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 PAEPP09466 180 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 PYYP10082 97 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 NEFHP12036 1026 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 TMEM91Q6ZNR0 172 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 SMIM15Q7Z3B0 74 aa-0.07□□□□□ -2.42
CMC1-202ENST00000396610 OR8I2Q8N0Y5 310 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms