RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ZNF726P1Q15940 193 aa11.14□□□□□ -0.63
COL4A3-202ENST00000396578 VOPP1Q96AW1 172 aa11.14□□□□□ -0.63
COL4A3-202ENST00000396578 IGKV1-6A0A0C4DH72 117 aa11.14□□□□□ -0.63
COL4A3-202ENST00000396578 WIPF3A6NGB9 483 aa11.14□□□□□ -0.63
COL4A3-202ENST00000396578 E7EQL1 145 aa11.14□□□□□ -0.63
COL4A3-202ENST00000396578 HERV-K104P63124 156 aa11.14□□□□□ -0.63
COL4A3-202ENST00000396578 IGKV1-39P01597 117 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 IGKV1D-39P04432 117 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 LMO1P25800 156 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 POU2AF1Q16633 256 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 MRPL53Q96EL3 112 aaKnown RBP11.13□□□□□ -0.63
COL4A3-202ENST00000396578 FOXL2NBQ6ZUU3 175 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 FXYD5Q96DB9 178 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 B3GALT5-AS1P59052 145 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 SLC25A29Q8N8R3 303 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 PRSS47A8MTI9 375 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 ATOX1O00244 68 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 CCL25O15444 150 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
COL4A3-202ENST00000396578 GNLYP22749 145 aa11.12□□□□□ -0.63
COL4A3-202ENST00000396578 XCL1P47992 114 aa11.12□□□□□ -0.63
COL4A3-202ENST00000396578 UBE2BP63146 152 aa11.12□□□□□ -0.63
COL4A3-202ENST00000396578 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
COL4A3-202ENST00000396578 CD59P13987 128 aa11.12□□□□□ -0.63
COL4A3-202ENST00000396578 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
COL4A3-202ENST00000396578 PRB1P04280 392 aa11.12□□□□□ -0.63
COL4A3-202ENST00000396578 C2orf16Q68DN1 1984 aa11.12□□□□□ -0.63
COL4A3-202ENST00000396578 H3BQ85 93 aa11.12□□□□□ -0.63
COL4A3-202ENST00000396578 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
COL4A3-202ENST00000396578 IGHV1-69P01742 117 aa11.11□□□□□ -0.63
COL4A3-202ENST00000396578 LTAP01374 205 aa11.11□□□□□ -0.63
COL4A3-202ENST00000396578 Q9H8V8 135 aa11.11□□□□□ -0.63
COL4A3-202ENST00000396578 PKIGQ9Y2B9 76 aa11.11□□□□□ -0.63
COL4A3-202ENST00000396578 G3V318 75 aa11.11□□□□□ -0.63
COL4A3-202ENST00000396578 IGLC7A0M8Q6 106 aa11.11□□□□□ -0.63
COL4A3-202ENST00000396578 K7EM74 188 aa11.1□□□□□ -0.63
COL4A3-202ENST00000396578 ZNF106Q9H2Y7 1883 aaKnown RBP11.1□□□□□ -0.63
COL4A3-202ENST00000396578 GATA4P43694 442 aa11.1□□□□□ -0.63
COL4A3-202ENST00000396578 MP68P56378 58 aa11.1□□□□□ -0.63
COL4A3-202ENST00000396578 RIF1Q5UIP0 2472 aaKnown RBP11.1□□□□□ -0.63
COL4A3-202ENST00000396578 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
COL4A3-202ENST00000396578 C17orf58Q2M2W7 97 aa11.1□□□□□ -0.63
COL4A3-202ENST00000396578 WIPF2Q8TF74 440 aaPredicted RBP11.1□□□□□ -0.63
COL4A3-202ENST00000396578 IGHV2-70DA0A0C4DH43 119 aa11.09□□□□□ -0.63
COL4A3-202ENST00000396578 J3KT08 172 aa11.09□□□□□ -0.63
COL4A3-202ENST00000396578 Q8TCH9 128 aa11.09□□□□□ -0.63
COL4A3-202ENST00000396578 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.09□□□□□ -0.63
COL4A3-202ENST00000396578 A0A1B0GX51 115 aa11.09□□□□□ -0.63
COL4A3-202ENST00000396578 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
COL4A3-202ENST00000396578 WNK1Q9H4A3 2382 aa11.09□□□□□ -0.63
COL4A3-202ENST00000396578 A0A096LPF7 62 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 FOXI2Q6ZQN5 318 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 MED13LQ71F56 2210 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 PCP2Q8IVA1 136 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 ATRXP46100 2492 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 K7EN84 100 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 BUB3O43684 328 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 ICOSQ9Y6W8 199 aa11.08□□□□□ -0.64
COL4A3-202ENST00000396578 PSMB8P28062 276 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 DYNAPQ8N1N2 210 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 ZNF747Q9BV97 191 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 RBAKDNA6NC62 111 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 RNF223E7ERA6 249 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 DEFB125Q8N687 156 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 DKK4Q9UBT3 224 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 FAM236AA0A1B0GUQ0 79 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 FAM236BA0A1B0GV22 79 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 IGKV2D-24A0A075B6R9 120 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
COL4A3-202ENST00000396578 SMIM20Q8N5G0 67 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 LINC00311Q8N616 119 aa11.07□□□□□ -0.64
COL4A3-202ENST00000396578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.06□□□□□ -0.64
COL4A3-202ENST00000396578 IGKV2-29A2NJV5 120 aaPredicted RBP11.06□□□□□ -0.64
COL4A3-202ENST00000396578 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
COL4A3-202ENST00000396578 E9PQ18 207 aa11.06□□□□□ -0.64
COL4A3-202ENST00000396578 C17orf82Q86X59 251 aaPredicted RBP11.06□□□□□ -0.64
COL4A3-202ENST00000396578 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
COL4A3-202ENST00000396578 CR1LQ2VPA4 569 aa11.06□□□□□ -0.64
COL4A3-202ENST00000396578 ETDCA0A1B0GVM5 59 aa11.06□□□□□ -0.64
COL4A3-202ENST00000396578 SH2D6Q7Z4S9 175 aa11.06□□□□□ -0.64
COL4A3-202ENST00000396578 IGHV4-4A0A075B6R2 117 aa11.06□□□□□ -0.64
COL4A3-202ENST00000396578 H0YGX0 51 aa11.06□□□□□ -0.64
COL4A3-202ENST00000396578 Q6ZVH6 145 aa11.06□□□□□ -0.64
COL4A3-202ENST00000396578 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 BAALCQ8WXS3 180 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 ADAMTS9Q9P2N4 1935 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 NDUFB1O75438 58 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 C8orf31Q8N9H6 132 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 C14orf132Q9NPU4 83 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 ARHGAP32A7KAX9 2087 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 KIR2DL5BA0A0G2JN68 375 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 KIR2DL5BA0A0G2JPC4 375 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 KIR2DL5AQ8N109 375 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 IGHV4-28A0A0C4DH34 117 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 IGFBPL1Q8WX77 278 aa11.05□□□□□ -0.64
COL4A3-202ENST00000396578 KIAA1671Q9BY89 1806 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms