RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ZNF688P0C7X2 276 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 TDRG1Q3Y452 100 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 FAM159AQ6UWV7 190 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 TRAV9-2A0A087WT02 112 aa12.18□□□□□ -0.46
SNX6-202ENST00000396526 IGHV4-4A0A075B6R2 117 aa12.17□□□□□ -0.46
SNX6-202ENST00000396526 MED14OSP0DP75 135 aa12.17□□□□□ -0.46
SNX6-202ENST00000396526 SELENOKQ9Y6D0 94 aa12.17□□□□□ -0.46
SNX6-202ENST00000396526 LINC01619G3V211 115 aa12.17□□□□□ -0.46
SNX6-202ENST00000396526 UQCR10Q9UDW1 63 aa12.17□□□□□ -0.46
SNX6-202ENST00000396526 CRXO43186 299 aaPredicted RBP12.16□□□□□ -0.46
SNX6-202ENST00000396526 NPYP01303 97 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 CCDC168Q8NDH2 2452 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 OR4C46A6NHA9 309 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 SMKR1H3BMG3 65 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 M0R143 59 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 NCR2O95944 276 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 HBDP02042 147 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 ANXA2RQ3ZCQ2 193 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 PRR9Q5T870 116 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 K7EQG2 157 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 EVI2AP22794 236 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 DEFB1P60022 68 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 TCTEX1D4Q5JR98 221 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 ZNF575Q86XF7 245 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 APRG1Q8IVJ8 170 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 ODF3Q96PU9 254 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 YAE1D1Q9NRH1 226 aa12.16□□□□□ -0.46
SNX6-202ENST00000396526 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
SNX6-202ENST00000396526 ATOH7Q8N100 152 aa12.15□□□□□ -0.46
SNX6-202ENST00000396526 RNF185Q96GF1 192 aa12.15□□□□□ -0.46
SNX6-202ENST00000396526 FAM19A4Q96LR4 140 aa12.15□□□□□ -0.46
SNX6-202ENST00000396526 FOXC2Q99958 501 aa12.15□□□□□ -0.46
SNX6-202ENST00000396526 M0R381 172 aa12.15□□□□□ -0.47
SNX6-202ENST00000396526 H0Y8G0 127 aa12.14□□□□□ -0.47
SNX6-202ENST00000396526 HIST2H2BCQ6DN03 193 aa12.14□□□□□ -0.47
SNX6-202ENST00000396526 OR1N2Q8NGR9 330 aa12.14□□□□□ -0.47
SNX6-202ENST00000396526 C4orf3Q8WVX3 66 aa12.14□□□□□ -0.47
SNX6-202ENST00000396526 OR11H1Q8NG94 326 aa12.14□□□□□ -0.47
SNX6-202ENST00000396526 ZNF747Q9BV97 191 aa12.14□□□□□ -0.47
SNX6-202ENST00000396526 EDN2P20800 178 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 MRPL52Q86TS9 123 aaKnown RBP12.13□□□□□ -0.47
SNX6-202ENST00000396526 MRAP2Q96G30 205 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 TLN2Q9Y4G6 2542 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 FBN2P35556 2912 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 KLLNB2CW77 178 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 OR2K2Q8NGT1 345 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 CD5LO43866 347 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 SMIM17P0DL12 118 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 DYNLRB2Q8TF09 96 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 WFDC12Q8WWY7 111 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 CSMD1Q96PZ7 3565 aa12.13□□□□□ -0.47
SNX6-202ENST00000396526 A0A0J9YX75 114 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 KLHL30-AS1Q8NEE0 82 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 C7orf71A4D174 169 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 LINC00173Q6ZV60 143 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 AP1S3Q96PC3 154 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 PPP1R17O96001 155 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 SPATA12Q7Z6I5 190 aa12.12□□□□□ -0.47
SNX6-202ENST00000396526 HNRNPA3P51991 378 aaKnown RBP12.11□□□□□ -0.47
SNX6-202ENST00000396526 SLURP1P55000 103 aa12.11□□□□□ -0.47
SNX6-202ENST00000396526 Q6ZN92 141 aa12.11□□□□□ -0.47
SNX6-202ENST00000396526 FOXI2Q6ZQN5 318 aa12.11□□□□□ -0.47
SNX6-202ENST00000396526 Q6ZSV7 163 aa12.11□□□□□ -0.47
SNX6-202ENST00000396526 IGLC3P0DOY3 106 aa12.11□□□□□ -0.47
SNX6-202ENST00000396526 SVEP1Q4LDE5 3571 aa12.11□□□□□ -0.47
SNX6-202ENST00000396526 CELSR2Q9HCU4 2923 aa12.11□□□□□ -0.47
SNX6-202ENST00000396526 Q6ZQT7 251 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 Q8N8P6 123 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 OR9G4Q8NGQ1 327 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 ST20Q9HBF5 79 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 MYO9AB2RTY4 2548 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 TRAV12-3A0A0B4J271 114 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 CDKN1BP46527 198 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 DEFB136Q30KP8 78 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 IGKV3-20P01619 116 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 CD7P09564 240 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 C2orf88Q9BSF0 95 aa12.1□□□□□ -0.47
SNX6-202ENST00000396526 GNRH2O43555 120 aa12.09□□□□□ -0.47
SNX6-202ENST00000396526 ZNF418Q8TF45 676 aaPredicted RBP12.09□□□□□ -0.47
SNX6-202ENST00000396526 IFI27L1Q96BM0 104 aa12.09□□□□□ -0.47
SNX6-202ENST00000396526 TRAV2A0A0B4J234 112 aa12.09□□□□□ -0.47
SNX6-202ENST00000396526 FCER1GP30273 86 aa12.09□□□□□ -0.47
SNX6-202ENST00000396526 LINC01545Q5VT33 79 aa12.09□□□□□ -0.47
SNX6-202ENST00000396526 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.47
SNX6-202ENST00000396526 CELSR1Q9NYQ6 3014 aa12.08□□□□□ -0.48
SNX6-202ENST00000396526 SYT8Q8NBV8 401 aa12.08□□□□□ -0.48
SNX6-202ENST00000396526 MGPP08493 103 aa12.07□□□□□ -0.48
SNX6-202ENST00000396526 IGLL1P15814 213 aa12.07□□□□□ -0.48
SNX6-202ENST00000396526 KIR3DS1Q14943 382 aa12.07□□□□□ -0.48
SNX6-202ENST00000396526 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
SNX6-202ENST00000396526 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
SNX6-202ENST00000396526 ZANQ9Y493 2812 aa12.07□□□□□ -0.48
SNX6-202ENST00000396526 GATA1P15976 413 aaPredicted RBP12.06□□□□□ -0.48
SNX6-202ENST00000396526 LGALS9BQ3B8N2 356 aa12.06□□□□□ -0.48
SNX6-202ENST00000396526 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
SNX6-202ENST00000396526 C18orf65Q6ZTR6 163 aa12.06□□□□□ -0.48
SNX6-202ENST00000396526 GOLT1BQ9Y3E0 138 aa12.06□□□□□ -0.48
SNX6-202ENST00000396526 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms