RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 TREM1Q9NP99 234 aa12.25□□□□□ -0.45
CXCL12-204ENST00000395793 C11orf21Q9P2W6 132 aa12.25□□□□□ -0.45
CXCL12-204ENST00000395793 TRAV21A0A0B4J279 112 aa12.24□□□□□ -0.45
CXCL12-204ENST00000395793 M0R2P5 195 aa12.24□□□□□ -0.45
CXCL12-204ENST00000395793 STAG3L2P0CL84 134 aa12.24□□□□□ -0.45
CXCL12-204ENST00000395793 STAG3L3P0CL85 134 aa12.24□□□□□ -0.45
CXCL12-204ENST00000395793 SRIP30626 198 aa12.24□□□□□ -0.45
CXCL12-204ENST00000395793 ZNF80P51504 273 aaPredicted RBP12.24□□□□□ -0.45
CXCL12-204ENST00000395793 Q5BKY6 102 aa12.24□□□□□ -0.45
CXCL12-204ENST00000395793 ATP6V0CP27449 155 aa12.23□□□□□ -0.45
CXCL12-204ENST00000395793 Q8N1X5 172 aa12.23□□□□□ -0.45
CXCL12-204ENST00000395793 SUN5Q8TC36 379 aa12.23□□□□□ -0.45
CXCL12-204ENST00000395793 AQP10Q96PS8 301 aa12.23□□□□□ -0.45
CXCL12-204ENST00000395793 SH3BGRL3Q9H299 93 aa12.23□□□□□ -0.45
CXCL12-204ENST00000395793 DNAH10OSP0CZ25 163 aa12.22□□□□□ -0.45
CXCL12-204ENST00000395793 GCHFRP30047 84 aa12.22□□□□□ -0.45
CXCL12-204ENST00000395793 OR4C5Q8NGB2 326 aa12.22□□□□□ -0.45
CXCL12-204ENST00000395793 PCNPQ8WW12 178 aaKnown RBP12.22□□□□□ -0.45
CXCL12-204ENST00000395793 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
CXCL12-204ENST00000395793 PSMG3Q9BT73 122 aaPredicted RBP12.22□□□□□ -0.45
CXCL12-204ENST00000395793 SDF2L1Q9HCN8 221 aa12.22□□□□□ -0.45
CXCL12-204ENST00000395793 GGTLC3B5MD39 225 aa12.21□□□□□ -0.45
CXCL12-204ENST00000395793 IGLV2-11P01706 119 aa12.21□□□□□ -0.45
CXCL12-204ENST00000395793 ORM1P02763 201 aa12.21□□□□□ -0.45
CXCL12-204ENST00000395793 TCRAP04437 139 aa12.21□□□□□ -0.45
CXCL12-204ENST00000395793 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.45
CXCL12-204ENST00000395793 LY96Q9Y6Y9 160 aa12.21□□□□□ -0.45
CXCL12-204ENST00000395793 GATA1P15976 413 aaPredicted RBP12.2□□□□□ -0.46
CXCL12-204ENST00000395793 DPPA3Q6W0C5 159 aa12.2□□□□□ -0.46
CXCL12-204ENST00000395793 TMEM75Q8N9X5 138 aa12.2□□□□□ -0.46
CXCL12-204ENST00000395793 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
CXCL12-204ENST00000395793 C9JCJ5 164 aa12.19□□□□□ -0.46
CXCL12-204ENST00000395793 PTTG1O95997 202 aa12.19□□□□□ -0.46
CXCL12-204ENST00000395793 ERVFC1-1P60608 527 aa12.19□□□□□ -0.46
CXCL12-204ENST00000395793 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
CXCL12-204ENST00000395793 MED28Q9H204 178 aa12.19□□□□□ -0.46
CXCL12-204ENST00000395793 SCRT2Q9NQ03 307 aa12.19□□□□□ -0.46
CXCL12-204ENST00000395793 PSG8Q9UQ74 426 aa12.19□□□□□ -0.46
CXCL12-204ENST00000395793 A0A087WTM6 91 aa12.18□□□□□ -0.46
CXCL12-204ENST00000395793 SERTM2A0A1B0GWG4 89 aa12.18□□□□□ -0.46
CXCL12-204ENST00000395793 SUMO1P63165 101 aaKnown RBP12.18□□□□□ -0.46
CXCL12-204ENST00000395793 TXNDC17Q9BRA2 123 aa12.18□□□□□ -0.46
CXCL12-204ENST00000395793 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
CXCL12-204ENST00000395793 BATF3Q9NR55 127 aa12.18□□□□□ -0.46
CXCL12-204ENST00000395793 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
CXCL12-204ENST00000395793 RNF222A6NCQ9 220 aa12.17□□□□□ -0.46
CXCL12-204ENST00000395793 GCGP01275 180 aa12.17□□□□□ -0.46
CXCL12-204ENST00000395793 FLI1Q01543 452 aaPredicted RBP12.17□□□□□ -0.46
CXCL12-204ENST00000395793 NFE4Q86UQ8 179 aa12.17□□□□□ -0.46
CXCL12-204ENST00000395793 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
CXCL12-204ENST00000395793 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
CXCL12-204ENST00000395793 TRAV9-2A0A087WT02 112 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 RS1O15537 224 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 SERF2P84101 59 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 ZNF726P1Q15940 193 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 CFAP126Q5VTH2 177 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 RPL7L1Q6DKI1 246 aaKnown RBP12.16□□□□□ -0.46
CXCL12-204ENST00000395793 PRNTQ86SH4 94 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 SLC25A29Q8N8R3 303 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 PGPEP1Q9NXJ5 209 aa12.16□□□□□ -0.46
CXCL12-204ENST00000395793 FBLL1A6NHQ2 334 aaKnown RBP12.15□□□□□ -0.46
CXCL12-204ENST00000395793 CXorf1O96002 111 aa12.15□□□□□ -0.46
CXCL12-204ENST00000395793 MBP02144 154 aa12.15□□□□□ -0.46
CXCL12-204ENST00000395793 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
CXCL12-204ENST00000395793 GIPP09681 153 aaPredicted RBP12.15□□□□□ -0.46
CXCL12-204ENST00000395793 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
CXCL12-204ENST00000395793 EVI2AP22794 236 aa12.15□□□□□ -0.46
CXCL12-204ENST00000395793 CYB561D1Q8N8Q1 229 aa12.15□□□□□ -0.46
CXCL12-204ENST00000395793 NHLRC2Q8NBF2 726 aa12.15□□□□□ -0.46
CXCL12-204ENST00000395793 TMEM167BQ9NRX6 74 aa12.15□□□□□ -0.46
CXCL12-204ENST00000395793 TNFSF18Q9UNG2 199 aa12.15□□□□□ -0.46
CXCL12-204ENST00000395793 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
CXCL12-204ENST00000395793 PGPEP1LA6NFU8 196 aa12.14□□□□□ -0.47
CXCL12-204ENST00000395793 TAAR5O14804 337 aa12.14□□□□□ -0.47
CXCL12-204ENST00000395793 CRYGDP07320 174 aa12.14□□□□□ -0.47
CXCL12-204ENST00000395793 TIRAPP58753 221 aa12.14□□□□□ -0.47
CXCL12-204ENST00000395793 ZNF506Q5JVG8 444 aa12.14□□□□□ -0.47
CXCL12-204ENST00000395793 LINC00479Q96M42 142 aa12.14□□□□□ -0.47
CXCL12-204ENST00000395793 ACTR3CQ9C0K3 210 aaPredicted RBP12.14□□□□□ -0.47
CXCL12-204ENST00000395793 TRAV34A0A0B4J273 112 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 G3V3Q6 166 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 K7EP13 123 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 K7EQM0 130 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 EREGO14944 169 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 XGP55808 180 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 KRTAP10-1P60331 282 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 SMUG1Q53HV7 270 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 CDPF1Q6NVV7 123 aa12.13□□□□□ -0.47
CXCL12-204ENST00000395793 FXYD6-FXYD2A0A087WZ82 144 aa12.12□□□□□ -0.47
CXCL12-204ENST00000395793 PPT1P50897 306 aa12.12□□□□□ -0.47
CXCL12-204ENST00000395793 SH2D6Q7Z4S9 175 aa12.12□□□□□ -0.47
CXCL12-204ENST00000395793 IGKV3D-20A0A0C4DH25 116 aa12.11□□□□□ -0.47
CXCL12-204ENST00000395793 IGHV3-38A0A0C4DH36 116 aa12.11□□□□□ -0.47
CXCL12-204ENST00000395793 TRBV6-4A0A1B0GX49 114 aa12.11□□□□□ -0.47
CXCL12-204ENST00000395793 A0A1W2PRE2 83 aa12.11□□□□□ -0.47
CXCL12-204ENST00000395793 RHOHQ15669 191 aa12.11□□□□□ -0.47
CXCL12-204ENST00000395793 Q6ZSN1 163 aa12.11□□□□□ -0.47
CXCL12-204ENST00000395793 PTH2Q96A98 100 aa12.11□□□□□ -0.47
CXCL12-204ENST00000395793 UBE2G2P60604 165 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms