RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-208	ENST00000395727	PQLC2	Q6ZP29	291 aa		4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727		Q6ZTI0	123 aa		4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727	OR2G3	Q8NGZ4	309 aa		4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727	BLNK	Q8WV28	456 aa		4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727		Q9H3A6	140 aa		4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727	MBD2	Q9UBB5	411 aa		4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727	MRPS16	Q9Y3D3	137 aa	Known RBP	4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727	LINC00588	Q9Y4M8	146 aa		4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727	KLF12	Q9Y4X4	402 aa		4.24	□□□□□ -1.73
PTPN20-208	ENST00000395727	TRAV26-1	A0A087WT03	109 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	SERTM2	A0A1B0GWG4	89 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	RHOD	O00212	210 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	IGKV2D-40	P01614	121 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	OR10J4	P0C629	311 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	PRB4	P10163	310 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	ZNF415	Q09FC8	603 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	ERCC8	Q13216	396 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	SLA	Q13239	276 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	FAM74A1	Q5RGS3	127 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	FAM122C	Q6P4D5	195 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	SSX7	Q7RTT5	188 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	IQCF2	Q8IXL9	164 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	C6orf223	Q8N319	242 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	SUN5	Q8TC36	379 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	SCGB1C1	Q8TD33	95 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	VSIG2	Q96IQ7	327 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	ST6GAL2	Q96JF0	529 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	AQP10	Q96PS8	301 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	SPX	Q9BT56	116 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	PSMG3	Q9BT73	122 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	OTOR	Q9NRC9	128 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	GSN-AS1	Q9NRJ2	163 aa		4.23	□□□□□ -1.73
PTPN20-208	ENST00000395727	TRGV2	A0A075B6R0	118 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727		J3KRW8	73 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727		K7EP13	123 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	RNASE4	P34096	147 aa	Known RBP	4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	RAN	P62826	216 aa	Known RBP	4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	SERF2	P84101	59 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	OR5I1	Q13606	314 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727		Q9H8V8	135 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	WFDC1	Q9HC57	220 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	PRO0255	Q9UI72	69 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	ALG5	Q9Y673	324 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	DNAH10	Q8IVF4	4471 aa		4.22	□□□□□ -1.73
PTPN20-208	ENST00000395727	DNAH6	Q9C0G6	4158 aa		4.21	□□□□□ -1.73
PTPN20-208	ENST00000395727		A0A096LPF7	62 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	TRGV1	A0A0A0MS02	117 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727		A0A1W2PPV4	95 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	FBLL1	A6NHQ2	334 aa	Known RBP	4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	MB	P02144	154 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	GIP	P09681	153 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	STAG3L2	P0CL84	134 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	STAG3L3	P0CL85	134 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	ESRG	Q1W209	222 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727		Q8N9P0	234 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	OR10G4	Q8NGN3	311 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727		Q8TAT8	98 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	RASL10A	Q92737	203 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	KRTAP1-5	Q9BYS1	174 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	ICOS	Q9Y6W8	199 aa		4.21	□□□□□ -1.74
PTPN20-208	ENST00000395727	TRAV21	A0A0B4J279	112 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	PGP	A6NDG6	321 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	CIDEA	O60543	219 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	CDK2AP2	O75956	126 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	ORM1	P02763	201 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	CDC34	P49427	236 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	CRYBA4	P53673	196 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	RAB2A	P61019	212 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	MRPL23	Q16540	153 aa	Known RBP	4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	FAM159A	Q6UWV7	190 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	C5orf17	Q8NAS9	161 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	OR10G9	Q8NGN4	311 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	OR10G7	Q8NGN6	311 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	CMTM2	Q8TAZ6	248 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	PTH2	Q96A98	100 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	KCNS1	Q96KK3	526 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	SMIM3	Q9BZL3	60 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	MED28	Q9H204	178 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	TNFSF18	Q9UNG2	199 aa		4.2	□□□□□ -1.74
PTPN20-208	ENST00000395727	TRAV4	A0A0B4J268	109 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	IGLV5-39	A0A0G2JS06	123 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727		A0A0J9YY99	117 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727		A0A1W2PRE2	83 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	RNF222	A6NCQ9	220 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	SIVA1	O15304	175 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	TCRA	P04437	139 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	IGKV2-30	P06310	120 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	ARL14EPL	P0DKL9	152 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	ATP6V0C	P27449	155 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727		Q6ZQT7	251 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727		Q6ZRN7	208 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	NDFIP1	Q9BT67	221 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	TMEM167B	Q9NRX6	74 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	MRPL16	Q9NX20	251 aa	Known RBP	4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	HHLA3	Q9XRX5	114 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	FAT2	Q9NYQ8	4349 aa		4.19	□□□□□ -1.74
PTPN20-208	ENST00000395727	DNAH2	Q9P225	4427 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms