RNA–Protein interactions for RNA: ENST00000395305.7

HLA-DMA-203, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-203ENST00000395305 IGHV3-53P01767 116 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 SEC11BP0C7V7 166 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 ZNF80P51504 273 aaPredicted RBP9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 FGF8P55075 233 aaPredicted RBP9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 UBE2G2P60604 165 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 FHL2Q14192 279 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 SMUG1Q53HV7 270 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 PRNTQ86SH4 94 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 C8orf49Q96NF6 230 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 SDF2L1Q9HCN8 221 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 HHLA3Q9XRX5 114 aa9.7□□□□□ -0.86
HLA-DMA-203ENST00000395305 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 MAP1LC3B2A6NCE7 125 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 UMAD1C9J7I0 102 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 M0R2P5 195 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 GCGP01275 180 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 TYMSP04818 313 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 SOHLH1Q5JUK2 328 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 C1orf134Q5TEV5 83 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 STOML3Q8TAV4 291 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 HIST1H2BAQ96A08 127 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 LINC00479Q96M42 142 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 MAP1LC3BQ9GZQ8 125 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 Q9H8V8 135 aa9.69□□□□□ -0.86
HLA-DMA-203ENST00000395305 TRAV34A0A0B4J273 112 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 KANTRA0A1W2PQU2 76 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 FHITP49789 147 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 PPT1P50897 306 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 CRYBA4P53673 196 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 ZFP69Q49AA0 526 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 MBD3L1Q8WWY6 194 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 C11orf21Q9P2W6 132 aa9.68□□□□□ -0.86
HLA-DMA-203ENST00000395305 TRGV4A0A0C4DH28 118 aa9.67□□□□□ -0.86
HLA-DMA-203ENST00000395305 PRSS29PA6NIE9 313 aa9.67□□□□□ -0.86
HLA-DMA-203ENST00000395305 PEX7O00628 323 aa9.67□□□□□ -0.86
HLA-DMA-203ENST00000395305 BCL2L11O43521 198 aa9.67□□□□□ -0.86
HLA-DMA-203ENST00000395305 EIF5AP63241 154 aaKnown RBP9.67□□□□□ -0.86
HLA-DMA-203ENST00000395305 ZNF471Q9BX82 626 aaPredicted RBP9.67□□□□□ -0.86
HLA-DMA-203ENST00000395305 MRPS16Q9Y3D3 137 aaKnown RBP9.67□□□□□ -0.86
HLA-DMA-203ENST00000395305 ICOSQ9Y6W8 199 aa9.67□□□□□ -0.86
HLA-DMA-203ENST00000395305 HECTD4Q9Y4D8 3996 aa9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 TRAV4A0A0B4J268 109 aa9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 FABP5P3A8MUU1 101 aa9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 MRPL23Q16540 153 aaKnown RBP9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 DPPA3Q6W0C5 159 aa9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 TMUB2Q71RG4 321 aa9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 ZNF479Q96JC4 524 aa9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 TCEAL7Q9BRU2 100 aa9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 ARL2-SNX15V9GYD0 113 aa9.66□□□□□ -0.86
HLA-DMA-203ENST00000395305 FAT2Q9NYQ8 4349 aa9.65□□□□□ -0.86
HLA-DMA-203ENST00000395305 A0A1B0GVY2 172 aa9.65□□□□□ -0.86
HLA-DMA-203ENST00000395305 SFTA3P0C7M3 94 aa9.65□□□□□ -0.86
HLA-DMA-203ENST00000395305 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.86
HLA-DMA-203ENST00000395305 SFT2D1Q8WV19 159 aa9.65□□□□□ -0.86
HLA-DMA-203ENST00000395305 PTH2Q96A98 100 aa9.65□□□□□ -0.86
HLA-DMA-203ENST00000395305 ZFP30Q9Y2G7 519 aa9.65□□□□□ -0.86
HLA-DMA-203ENST00000395305 PFDN1O60925 122 aa9.64□□□□□ -0.87
HLA-DMA-203ENST00000395305 LGALSLQ3ZCW2 172 aaPredicted RBP9.64□□□□□ -0.87
HLA-DMA-203ENST00000395305 ZNF876PQ49A33 203 aa9.64□□□□□ -0.87
HLA-DMA-203ENST00000395305 CST9LP1Q5W188 147 aa9.64□□□□□ -0.87
HLA-DMA-203ENST00000395305 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
HLA-DMA-203ENST00000395305 FAM213BQ8TBF2 198 aa9.64□□□□□ -0.87
HLA-DMA-203ENST00000395305 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 CIDEAO60543 219 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 PAGE4O60829 102 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 ORM1P02763 201 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 TPT1P13693 172 aaKnown RBP9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 TTC32Q5I0X7 151 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 LYPD5Q6UWN5 251 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 Q6ZNX1 250 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 FMC1Q96HJ9 113 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
HLA-DMA-203ENST00000395305 A0A1W2PPQ1 181 aa9.62□□□□□ -0.87
HLA-DMA-203ENST00000395305 C9JCJ5 164 aa9.62□□□□□ -0.87
HLA-DMA-203ENST00000395305 H2AFB1P0C5Y9 115 aa9.62□□□□□ -0.87
HLA-DMA-203ENST00000395305 RNASE3P12724 160 aaKnown RBP9.62□□□□□ -0.87
HLA-DMA-203ENST00000395305 UBE2G1P62253 170 aa9.62□□□□□ -0.87
HLA-DMA-203ENST00000395305 Q86TA4 180 aa9.62□□□□□ -0.87
HLA-DMA-203ENST00000395305 TCTE3Q8IZS6 198 aa9.62□□□□□ -0.87
HLA-DMA-203ENST00000395305 PKD1P98161 4303 aa9.61□□□□□ -0.87
HLA-DMA-203ENST00000395305 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
HLA-DMA-203ENST00000395305 K7EQD1 137 aa9.61□□□□□ -0.87
HLA-DMA-203ENST00000395305 RS1O15537 224 aa9.61□□□□□ -0.87
HLA-DMA-203ENST00000395305 S100A9P06702 114 aaKnown RBP9.61□□□□□ -0.87
HLA-DMA-203ENST00000395305 GYPEP15421 78 aa9.61□□□□□ -0.87
HLA-DMA-203ENST00000395305 CRIP1P50238 77 aa9.61□□□□□ -0.87
HLA-DMA-203ENST00000395305 PCNPQ8WW12 178 aaKnown RBP9.61□□□□□ -0.87
HLA-DMA-203ENST00000395305 PGPEP1LA6NFU8 196 aa9.6□□□□□ -0.87
HLA-DMA-203ENST00000395305 SIVA1O15304 175 aa9.6□□□□□ -0.87
HLA-DMA-203ENST00000395305 LTAP01374 205 aa9.6□□□□□ -0.87
HLA-DMA-203ENST00000395305 GATA1P15976 413 aaPredicted RBP9.6□□□□□ -0.87
HLA-DMA-203ENST00000395305 BTF3P20290 206 aaKnown RBP9.6□□□□□ -0.87
HLA-DMA-203ENST00000395305 S100A4P26447 101 aaKnown RBP9.6□□□□□ -0.87
HLA-DMA-203ENST00000395305 SRIP30626 198 aa9.6□□□□□ -0.87
HLA-DMA-203ENST00000395305 RAB5CP51148 216 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms