RNA–Protein interactions for RNA: ENST00000394684.8

SGMS2-202, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 6,149 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-202ENST00000394684 ETDBQ3ZM63 59 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 Q6ZS49 121 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 LOC285556D6RIA3 1793 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 MED12Q93074 2177 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 IGHV2-5P01817 119 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 HERV-K104P63124 156 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 SMAD5-AS1Q9Y6J3 95 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 PARP14Q460N5 1801 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 LOC105371267A0A1B0GV96 52 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 K7EQD1 137 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 HLA-DMBP28068 263 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 DIAPH2-AS1Q14236 149 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 Q6ZR03 302 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 ZC2HC1AQ96GY0 325 aa6.92□□□□□ -1.3
SGMS2-202ENST00000394684 CEND1Q8N111 149 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 IL17DQ8TAD2 202 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 TMEM14CQ9P0S9 112 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 PTPRFP10586 1907 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 NDUFA1O15239 70 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 SPANXDQ9BXN6 97 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 PLCE1Q9P212 2302 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 GAGE12HA6NDE8 117 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 NCR3O14931 201 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 RNF183Q96D59 192 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 SCN10AQ9Y5Y9 1956 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 GOLGB1Q14789 3259 aaKnown RBP6.91□□□□□ -1.3
SGMS2-202ENST00000394684 C9orf118A6NHY6 69 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 WT1-ASQ06250 92 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 FOXE3Q13461 319 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 Q8NFD4 153 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 TET1Q8NFU7 2136 aa6.91□□□□□ -1.3
SGMS2-202ENST00000394684 RIF1Q5UIP0 2472 aaKnown RBP6.9□□□□□ -1.3
SGMS2-202ENST00000394684 PROP1O75360 226 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 Q0VG73 95 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 DEFB135Q30KP9 77 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 LINC00311Q8N616 119 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 PKDREJQ9NTG1 2253 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 SPRY2O43597 315 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 WIPF3A6NGB9 483 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 LTAP01374 205 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 PATJQ8NI35 1801 aa6.9□□□□□ -1.3
SGMS2-202ENST00000394684 F8W1H4 67 aa6.9□□□□□ -1.31
SGMS2-202ENST00000394684 GTSF1Q8WW33 167 aa6.9□□□□□ -1.31
SGMS2-202ENST00000394684 OPRPNQ99935 248 aaPredicted RBP6.9□□□□□ -1.31
SGMS2-202ENST00000394684 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.9□□□□□ -1.31
SGMS2-202ENST00000394684 IGHV4-30-2A0A087WSY4 118 aa6.9□□□□□ -1.31
SGMS2-202ENST00000394684 ETV2O00321 342 aaPredicted RBP6.9□□□□□ -1.31
SGMS2-202ENST00000394684 LGALS9BQ3B8N2 356 aa6.9□□□□□ -1.31
SGMS2-202ENST00000394684 LGALS9CQ6DKI2 356 aa6.9□□□□□ -1.31
SGMS2-202ENST00000394684 NTN5Q8WTR8 489 aaPredicted RBP6.9□□□□□ -1.31
SGMS2-202ENST00000394684 RBBP6Q7Z6E9 1792 aaKnown RBP6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGKV1-6A0A0C4DH72 117 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGLC2P0DOY2 106 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGLC3P0DOY3 106 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGHV4-38-2P0DP08 117 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 QRFPP83859 136 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 K7ERJ3 54 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 ZNF493Q6ZR52 646 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 ZNF664Q8N3J9 261 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 HHLA3Q9XRX5 114 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGHV4-61A0A0C4DH41 118 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGLC1P0CG04 106 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 ASPHD1Q5U4P2 390 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 CASC2Q6XLA1 102 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 FOXL2NBQ6ZUU3 175 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 SVIPQ8NHG7 77 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGFBPL1Q8WX77 278 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 GRNP28799 593 aaKnown RBP6.89□□□□□ -1.31
SGMS2-202ENST00000394684 PDCD11Q14690 1871 aaKnown RBP6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
SGMS2-202ENST00000394684 ZFP36P26651 326 aaKnown RBP6.89□□□□□ -1.31
SGMS2-202ENST00000394684 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 K7EM74 188 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 BRCA1P38398 1863 aaKnown RBP6.88□□□□□ -1.31
SGMS2-202ENST00000394684 H3BMG7 143 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 DAZ2Q13117 558 aaKnown RBP6.88□□□□□ -1.31
SGMS2-202ENST00000394684 ZFP2Q6ZN57 461 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 DAZ4Q86SG3 579 aaKnown RBP6.88□□□□□ -1.31
SGMS2-202ENST00000394684 C17orf77Q96MU5 243 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 DAZ3Q9NR90 486 aaKnown RBP6.88□□□□□ -1.31
SGMS2-202ENST00000394684 NRGNQ92686 78 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 PYY3Q5JQD4 70 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 CFC1BP0CG36 223 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 CFC1P0CG37 223 aa6.88□□□□□ -1.31
SGMS2-202ENST00000394684 ZNF491Q8N8L2 437 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 AGPAT4-IT1Q9H0P7 198 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 DKK2Q9UBU2 259 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 KLF2Q9Y5W3 355 aaPredicted RBP6.87□□□□□ -1.31
SGMS2-202ENST00000394684 COX8AP10176 69 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 PRR20EP86478 221 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 PRR20CP86479 221 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 PRR20DP86480 221 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 PRR20BP86481 221 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 PRR20AP86496 221 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 NCOR1P1Q9H4R4 102 aa6.87□□□□□ -1.31
SGMS2-202ENST00000394684 TP53BP1Q12888 1972 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms