RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RNASE4P34096 147 aaKnown RBP11.34□□□□□ -0.59
GPC3-202ENST00000394299 KIR2DL5AQ8N109 375 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 PRSS3P2Q8NHM4 247 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 VAMP8Q9BV40 100 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 SNHG12Q9BXW3 62 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 ANK3Q12955 4377 aaKnown RBP11.34□□□□□ -0.59
GPC3-202ENST00000394299 NPYP01303 97 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 LGALS1P09382 135 aaKnown RBP11.34□□□□□ -0.59
GPC3-202ENST00000394299 EVI2AP22794 236 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 HOXD3P31249 432 aaPredicted RBP11.34□□□□□ -0.59
GPC3-202ENST00000394299 UFC1Q9Y3C8 167 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 TMEM89A2RUT3 159 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 ELANEP08246 267 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 ZNF688P0C7X2 276 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 RAB4AP20338 218 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 CKS2P33552 79 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 MYOZ3Q8TDC0 251 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 MS4A6AQ9H2W1 248 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 SIGLEC8Q9NYZ4 499 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 U3KQK5 164 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 H3BVH4 76 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 LEPROTL1O95214 131 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 SLURP1P55000 103 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 C21orf62-AS1Q17RA5 79 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 ORMDL3Q8N138 153 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 CNFNQ9BYD5 112 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 TMEM191AQ9H0A3 160 aa11.33□□□□□ -0.6
GPC3-202ENST00000394299 H0Y8G0 127 aa11.32□□□□□ -0.6
GPC3-202ENST00000394299 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
GPC3-202ENST00000394299 KLHDC1Q8N7A1 406 aa11.32□□□□□ -0.6
GPC3-202ENST00000394299 UBE2E2Q96LR5 201 aa11.32□□□□□ -0.6
GPC3-202ENST00000394299 SETD2Q9BYW2 2564 aaPredicted RBP11.32□□□□□ -0.6
GPC3-202ENST00000394299 IGKV3-20P01619 116 aa11.32□□□□□ -0.6
GPC3-202ENST00000394299 AP5S1Q9NUS5 200 aa11.32□□□□□ -0.6
GPC3-202ENST00000394299 AGRNO00468 2067 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 UNC79Q9P2D8 2635 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 MTORP42345 2549 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 GNRH2O43555 120 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 ADAMTSL5Q6ZMM2 481 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 FA2HQ7L5A8 372 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 ANXA2RQ3ZCQ2 193 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 SPATA45Q537H7 98 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
GPC3-202ENST00000394299 TRAV26-2A0A0B4J265 109 aa11.3□□□□□ -0.6
GPC3-202ENST00000394299 KHDC1LQ5JSQ8 128 aa11.3□□□□□ -0.6
GPC3-202ENST00000394299 ZNF705AQ6ZN79 300 aaPredicted RBP11.3□□□□□ -0.6
GPC3-202ENST00000394299 C11orf44Q8N8P7 122 aa11.3□□□□□ -0.6
GPC3-202ENST00000394299 PMCHL2Q9BQD1 86 aa11.3□□□□□ -0.6
GPC3-202ENST00000394299 TMEM70Q9BUB7 260 aa11.3□□□□□ -0.6
GPC3-202ENST00000394299 LENEPQ9Y5L5 61 aa11.3□□□□□ -0.6
GPC3-202ENST00000394299 GCN1Q92616 2671 aaKnown RBP11.3□□□□□ -0.6
GPC3-202ENST00000394299 A0A096LNJ9 63 aa11.3□□□□□ -0.6
GPC3-202ENST00000394299 ZNF25P17030 456 aaPredicted RBP11.3□□□□□ -0.6
GPC3-202ENST00000394299 ESM1Q9NQ30 184 aa11.3□□□□□ -0.6
GPC3-202ENST00000394299 FASNP49327 2511 aaKnown RBP11.29□□□□□ -0.6
GPC3-202ENST00000394299 SPANXN1Q5VSR9 72 aa11.29□□□□□ -0.6
GPC3-202ENST00000394299 Q8N2B8 174 aa11.29□□□□□ -0.6
GPC3-202ENST00000394299 C20orf144Q9BQM9 153 aa11.29□□□□□ -0.6
GPC3-202ENST00000394299 HECTD1Q9ULT8 2610 aa11.29□□□□□ -0.6
GPC3-202ENST00000394299 TRAV21A0A0B4J279 112 aa11.28□□□□□ -0.6
GPC3-202ENST00000394299 SYS1-DBNDD2H3BUS1 97 aa11.28□□□□□ -0.6
GPC3-202ENST00000394299 ID1P41134 155 aa11.28□□□□□ -0.6
GPC3-202ENST00000394299 KRTAP1-1Q07627 177 aa11.28□□□□□ -0.6
GPC3-202ENST00000394299 RNF152Q8N8N0 203 aa11.28□□□□□ -0.6
GPC3-202ENST00000394299 OR5AL1P0C617 328 aa11.28□□□□□ -0.6
GPC3-202ENST00000394299 Q6ZSV7 163 aa11.28□□□□□ -0.6
GPC3-202ENST00000394299 OR11H1Q8NG94 326 aa11.28□□□□□ -0.6
GPC3-202ENST00000394299 DNAJC9-AS1A6NH13 148 aa11.27□□□□□ -0.6
GPC3-202ENST00000394299 M0R381 172 aa11.27□□□□□ -0.6
GPC3-202ENST00000394299 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.6
GPC3-202ENST00000394299 TRAV12-2A0A075B6T6 113 aa11.27□□□□□ -0.61
GPC3-202ENST00000394299 SNAI2O43623 268 aa11.27□□□□□ -0.61
GPC3-202ENST00000394299 K7EQG2 157 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 M0R143 59 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 S100A4P26447 101 aaKnown RBP11.26□□□□□ -0.61
GPC3-202ENST00000394299 MIEN1Q9BRT3 115 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 YAE1D1Q9NRH1 226 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 TRAV12-3A0A0B4J271 114 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 LGALS9O00182 355 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 TCF21O43680 179 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 TNFRSF6BO95407 300 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
GPC3-202ENST00000394299 OR4C46A6NHA9 309 aa11.25□□□□□ -0.61
GPC3-202ENST00000394299 NPSP0C0P6 89 aa11.25□□□□□ -0.61
GPC3-202ENST00000394299 ZNF747Q9BV97 191 aa11.25□□□□□ -0.61
GPC3-202ENST00000394299 TP73-AS1Q9UF72 201 aa11.25□□□□□ -0.61
GPC3-202ENST00000394299 NOTCH2Q04721 2471 aa11.25□□□□□ -0.61
GPC3-202ENST00000394299 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
GPC3-202ENST00000394299 IGLL1P15814 213 aa11.25□□□□□ -0.61
GPC3-202ENST00000394299 APRG1Q8IVJ8 170 aa11.25□□□□□ -0.61
GPC3-202ENST00000394299 CBY1Q9Y3M2 126 aa11.25□□□□□ -0.61
GPC3-202ENST00000394299 NIPBLQ6KC79 2804 aaeCLIP11.24□□□□□ -0.61
GPC3-202ENST00000394299 hDV102S1A0JD36 115 aa11.24□□□□□ -0.61
GPC3-202ENST00000394299 KLLNB2CW77 178 aa11.24□□□□□ -0.61
GPC3-202ENST00000394299 DLEU1O43261 78 aa11.24□□□□□ -0.61
GPC3-202ENST00000394299 RNASE3P12724 160 aaKnown RBP11.24□□□□□ -0.61
GPC3-202ENST00000394299 PCP4P48539 62 aa11.24□□□□□ -0.61
GPC3-202ENST00000394299 DLX4Q92988 240 aaPredicted RBP11.24□□□□□ -0.61
GPC3-202ENST00000394299 SMR3AQ99954 134 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms