RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 DTX2Q86UW9 622 aa16.87■□□□□ 0.29
CLDND1-202ENST00000394180 ZNF575Q86XF7 245 aa16.87■□□□□ 0.29
CLDND1-202ENST00000394180 ZNRD1Q9P1U0 126 aa16.87■□□□□ 0.29
CLDND1-202ENST00000394180 FLNCQ14315 2725 aa16.86■□□□□ 0.29
CLDND1-202ENST00000394180 COX6B1P14854 86 aa16.86■□□□□ 0.29
CLDND1-202ENST00000394180 C10orf126Q8N4M7 172 aa16.86■□□□□ 0.29
CLDND1-202ENST00000394180 DSCAMO60469 2012 aa16.86■□□□□ 0.29
CLDND1-202ENST00000394180 M0R3E3 92 aa16.85■□□□□ 0.29
CLDND1-202ENST00000394180 BRI3O95415 125 aa16.85■□□□□ 0.29
CLDND1-202ENST00000394180 SRSF9Q13242 221 aaKnown RBP eCLIP16.85■□□□□ 0.29
CLDND1-202ENST00000394180 HIF1ANQ9NWT6 349 aa16.85■□□□□ 0.29
CLDND1-202ENST00000394180 ZNF462Q96JM2 2506 aa16.85■□□□□ 0.29
CLDND1-202ENST00000394180 RPL13AP40429 203 aaKnown RBP16.85■□□□□ 0.29
CLDND1-202ENST00000394180 SPRNQ5BIV9 151 aa16.85■□□□□ 0.29
CLDND1-202ENST00000394180 DUX4L9Q6RFH8 374 aaPredicted RBP16.85■□□□□ 0.29
CLDND1-202ENST00000394180 ZNF491Q8N8L2 437 aa16.85■□□□□ 0.29
CLDND1-202ENST00000394180 NRACQ8N912 160 aa16.85■□□□□ 0.29
CLDND1-202ENST00000394180 NEXN-AS1Q8NBZ9 246 aa16.85■□□□□ 0.29
CLDND1-202ENST00000394180 SPTBN1Q01082 2364 aaKnown RBP16.84■□□□□ 0.29
CLDND1-202ENST00000394180 IGLV3-9A0A075B6K5 115 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 SLC25A20O43772 301 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 HLA-DMBP28068 263 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 GRNP28799 593 aaKnown RBP16.84■□□□□ 0.29
CLDND1-202ENST00000394180 ORMDL2Q53FV1 153 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 RNF125Q96EQ8 232 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 CCL13Q99616 98 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 CHD6Q8TD26 2715 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 ZNF815PA8K554 130 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 M0R1B8 84 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 C3orf36Q3SXR2 165 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 TPSG1Q9NRR2 321 aa16.84■□□□□ 0.29
CLDND1-202ENST00000394180 GLRXP35754 106 aa16.83■□□□□ 0.28
CLDND1-202ENST00000394180 PRADC1Q9BSG0 188 aa16.83■□□□□ 0.28
CLDND1-202ENST00000394180 MSRB1Q9NZV6 116 aa16.83■□□□□ 0.28
CLDND1-202ENST00000394180 TRAV4A0A0B4J268 109 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 TEX22C9J3V5 150 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 GAS8-AS1O95177 125 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 KIR2DL4Q99706 377 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 ASCL2Q99929 193 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 TRAV8-2A0A0B4J237 113 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 PAPPA-AS1Q5QFB9 102 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 SCGB1D4Q6XE38 83 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 FAM216BQ8N7L0 139 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 TOMM6Q96B49 74 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 RAB1BQ9H0U4 201 aa16.82■□□□□ 0.28
CLDND1-202ENST00000394180 P0DMU3 169 aa16.81■□□□□ 0.28
CLDND1-202ENST00000394180 FAM231AP0DMU4 169 aa16.81■□□□□ 0.28
CLDND1-202ENST00000394180 FAM231CP0DMU5 169 aa16.81■□□□□ 0.28
CLDND1-202ENST00000394180 MSMPQ1L6U9 139 aa16.81■□□□□ 0.28
CLDND1-202ENST00000394180 KMT2BQ9UMN6 2715 aaPredicted RBP16.81■□□□□ 0.28
CLDND1-202ENST00000394180 IGHV4-4A0A075B6R2 117 aa16.81■□□□□ 0.28
CLDND1-202ENST00000394180 FAM201AQ5SY85 155 aa16.81■□□□□ 0.28
CLDND1-202ENST00000394180 YAE1D1Q9NRH1 226 aa16.81■□□□□ 0.28
CLDND1-202ENST00000394180 SIGLEC9Q9Y336 463 aa16.8■□□□□ 0.28
CLDND1-202ENST00000394180 MYO18BQ8IUG5 2567 aa16.8■□□□□ 0.28
CLDND1-202ENST00000394180 ZNF80P51504 273 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-202ENST00000394180 PRO1854Q9UHT4 67 aa16.8■□□□□ 0.28
CLDND1-202ENST00000394180 NAV3Q8IVL0 2385 aa16.79■□□□□ 0.28
CLDND1-202ENST00000394180 SPRY3O43610 288 aa16.79■□□□□ 0.28
CLDND1-202ENST00000394180 ZNF843Q8N446 348 aa16.79■□□□□ 0.28
CLDND1-202ENST00000394180 ROS1P08922 2347 aa16.79■□□□□ 0.28
CLDND1-202ENST00000394180 ORM1P02763 201 aa16.78■□□□□ 0.28
CLDND1-202ENST00000394180 RASL10AQ92737 203 aa16.78■□□□□ 0.28
CLDND1-202ENST00000394180 LRBAP50851 2863 aa16.78■□□□□ 0.28
CLDND1-202ENST00000394180 IGHV3-21A0A0B4J1V1 117 aa16.78■□□□□ 0.28
CLDND1-202ENST00000394180 LINC01548A6NM66 108 aa16.78■□□□□ 0.28
CLDND1-202ENST00000394180 H3BVH4 76 aa16.78■□□□□ 0.28
CLDND1-202ENST00000394180 RPL7P18124 248 aaKnown RBP16.78■□□□□ 0.28
CLDND1-202ENST00000394180 FAM159AQ6UWV7 190 aa16.78■□□□□ 0.28
CLDND1-202ENST00000394180 GATA1P15976 413 aaPredicted RBP16.77■□□□□ 0.28
CLDND1-202ENST00000394180 ERCC8Q13216 396 aa16.77■□□□□ 0.28
CLDND1-202ENST00000394180 SCGB3A1Q96QR1 104 aa16.77■□□□□ 0.28
CLDND1-202ENST00000394180 SMIM2Q9BVW6 85 aa16.77■□□□□ 0.28
CLDND1-202ENST00000394180 PLCE1Q9P212 2302 aa16.77■□□□□ 0.28
CLDND1-202ENST00000394180 ANKHD1Q8IWZ3 2542 aaKnown RBP16.77■□□□□ 0.28
CLDND1-202ENST00000394180 ICE1Q9Y2F5 2266 aa16.77■□□□□ 0.27
CLDND1-202ENST00000394180 A0A0J9YY99 117 aa16.77■□□□□ 0.27
CLDND1-202ENST00000394180 CFC1BP0CG36 223 aa16.77■□□□□ 0.27
CLDND1-202ENST00000394180 CFC1P0CG37 223 aa16.77■□□□□ 0.27
CLDND1-202ENST00000394180 TNFAIP6P98066 277 aaPredicted RBP16.77■□□□□ 0.27
CLDND1-202ENST00000394180 LINC01560Q8TB33 94 aa16.77■□□□□ 0.27
CLDND1-202ENST00000394180 RAI1Q7Z5J4 1906 aaPredicted RBP16.76■□□□□ 0.27
CLDND1-202ENST00000394180 HERVK_113P61574 105 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 MEIG1Q5JSS6 88 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 RNF5Q99942 180 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 SPANXCQ9NY87 97 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 VPREB3Q9UKI3 123 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 FAM240AA0A1B0GVK7 77 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 RBAKDNA6NC62 111 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 K7EIM0 57 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 IGHV3-30P01768 117 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 IGHV3-30-5P0DP03 117 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 PRTN3P24158 256 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 TMEM200BQ69YZ2 307 aa16.76■□□□□ 0.27
CLDND1-202ENST00000394180 RNASE6Q93091 150 aaKnown RBP16.76■□□□□ 0.27
CLDND1-202ENST00000394180 IGKV2-40A0A087WW87 121 aaPredicted RBP16.75■□□□□ 0.27
CLDND1-202ENST00000394180 IGKV2D-40P01614 121 aaPredicted RBP16.75■□□□□ 0.27
CLDND1-202ENST00000394180 FBXL19-AS1Q494R0 122 aa16.75■□□□□ 0.27
CLDND1-202ENST00000394180 Q8N1Y9 231 aa16.75■□□□□ 0.27
CLDND1-202ENST00000394180 SLC50A1Q9BRV3 221 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms