RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 IGF2BP2-AS1Q96M15 143 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 ESM1Q9NQ30 184 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 SMAD5-AS1Q9Y6J3 95 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 SMIM9A6NGZ8 99 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 C9JCJ5 164 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 BUB3O43684 328 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 IGLV2-8P01709 118 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 IGHG4P01861 327 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 TCRAP04437 139 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 FABP4P15090 132 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 RPL7P18124 248 aaKnown RBP4.46□□□□□ -1.7
CASC3-202ENST00000394114 PSMB8P28062 276 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 FOXI1Q12951 378 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 BAGE2Q86Y30 109 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 USMG5Q96IX5 58 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 YPEL4Q96NS1 127 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 METTL26Q96S19 204 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 TUBA4BQ9H853 241 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 OTORQ9NRC9 128 aa4.46□□□□□ -1.7
CASC3-202ENST00000394114 A0A0G2JLM5 398 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 ZNF705FA8MVS1 300 aaPredicted RBP4.45□□□□□ -1.7
CASC3-202ENST00000394114 H3BUA1 57 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 CA1P00915 261 aaPredicted RBP4.45□□□□□ -1.7
CASC3-202ENST00000394114 PRNTQ86SH4 94 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 RNF182Q8N6D2 247 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 OR10G8Q8NGN5 311 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 NAA38Q9BRA0 125 aaKnown RBP4.45□□□□□ -1.7
CASC3-202ENST00000394114 GAGE7O76087 117 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 TYMSP04818 313 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 GAGE12FP0CL80 117 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 GAGE12GP0CL81 117 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 GAGE12IP0CL82 117 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 SLC35B1P78383 322 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 GAGE4Q13068 117 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 DEFB136Q30KP8 78 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 C18orf65Q6ZTR6 163 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 Q6ZVH6 145 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 MTURNQ8N3F0 131 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 MAPKAPK5-AS1Q8N8E1 139 aa4.45□□□□□ -1.7
CASC3-202ENST00000394114 NOTCH3Q9UM47 2321 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 IGKV2-40A0A087WW87 121 aaPredicted RBP4.44□□□□□ -1.7
CASC3-202ENST00000394114 SPINK4O60575 86 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 IGKV2D-40P01614 121 aaPredicted RBP4.44□□□□□ -1.7
CASC3-202ENST00000394114 FOXE3Q13461 319 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 TMEM242Q9NWH2 141 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 COL6A5A8TX70 2615 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 STAB1Q9NY15 2570 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 LY6G6DO95868 133 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 PFN1P07737 140 aaKnown RBP4.44□□□□□ -1.7
CASC3-202ENST00000394114 TMEM183BQ1AE95 376 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 IBA57Q5T440 356 aaKnown RBP4.44□□□□□ -1.7
CASC3-202ENST00000394114 C12orf54Q6X4T0 127 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 MRAP2Q96G30 205 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 DUX3Q96PT4 197 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 SIGMAR1Q99720 223 aa4.44□□□□□ -1.7
CASC3-202ENST00000394114 NDUFA4O00483 81 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 IGLV2-11P01706 119 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 TRGC2P03986 189 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 RPEL1Q2QD12 228 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 GFI1BQ5VTD9 330 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
CASC3-202ENST00000394114 Q86TA4 180 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 SYT8Q8NBV8 401 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 Q8TAT8 98 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 V9GYV3 84 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 AGRNO00468 2067 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 IGHV4OR15-8A0A075B7B6 117 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 A0A087WW49 117 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 PRAC2D3DTV9 90 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 GCGP01275 180 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 FRMD6-AS1P0C7T7 363 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 ESDP10768 282 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 DEFB1P60022 68 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 GAGE5Q13069 117 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 GAGE6Q13070 117 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 PDE6HQ13956 83 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 TEX29Q8N6K0 151 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 TMEM190Q8WZ59 177 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 FMC1Q96HJ9 113 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 GPR82Q96P67 336 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 VGLL1Q99990 258 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 ZNF331Q9NQX6 463 aaPredicted RBP4.43□□□□□ -1.7
CASC3-202ENST00000394114 KLF12Q9Y4X4 402 aa4.43□□□□□ -1.7
CASC3-202ENST00000394114 LTAP01374 205 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 GZMBP10144 247 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 CD99P14209 185 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 CSN1S1P47710 185 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 SYNJ2BPP57105 145 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 PSG9Q00887 426 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 VAMP3Q15836 100 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 TCTEX1D4Q5JR98 221 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 TCF24Q7RTU0 167 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 MRPL52Q86TS9 123 aaKnown RBP4.42□□□□□ -1.7
CASC3-202ENST00000394114 ZNF738Q8NE65 137 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 BAALCQ8WXS3 180 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 C8orf49Q96NF6 230 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 RHPN1-AS1Q9BWJ2 59 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 ZNF580Q9UK33 172 aa4.42□□□□□ -1.7
CASC3-202ENST00000394114 LY96Q9Y6Y9 160 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms