RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 LENEPQ9Y5L5 61 aa13.44□□□□□ -0.26
SNCB-202ENST00000393693 FAT2Q9NYQ8 4349 aa13.44□□□□□ -0.26
SNCB-202ENST00000393693 DNAH17Q9UFH2 4485 aa13.44□□□□□ -0.26
SNCB-202ENST00000393693 DNAH2Q9P225 4427 aa13.44□□□□□ -0.26
SNCB-202ENST00000393693 Q6ZTC4 211 aa13.43□□□□□ -0.26
SNCB-202ENST00000393693 TRPT1Q86TN4 253 aaKnown RBP13.43□□□□□ -0.26
SNCB-202ENST00000393693 AGPAT4-IT1Q9H0P7 198 aa13.43□□□□□ -0.26
SNCB-202ENST00000393693 X6R8D5 127 aa13.43□□□□□ -0.26
SNCB-202ENST00000393693 ZNF705GA8MUZ8 300 aaPredicted RBP13.42□□□□□ -0.26
SNCB-202ENST00000393693 NPIPB6E9PJ23 425 aa13.42□□□□□ -0.26
SNCB-202ENST00000393693 ERCC8Q13216 396 aa13.42□□□□□ -0.26
SNCB-202ENST00000393693 SMUG1Q53HV7 270 aa13.42□□□□□ -0.26
SNCB-202ENST00000393693 EBLN2Q6P2I7 272 aa13.42□□□□□ -0.26
SNCB-202ENST00000393693 COX8CQ7Z4L0 72 aa13.42□□□□□ -0.26
SNCB-202ENST00000393693 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.42□□□□□ -0.26
SNCB-202ENST00000393693 OR8A1Q8NGG7 326 aa13.42□□□□□ -0.26
SNCB-202ENST00000393693 BTF3L4Q96K17 158 aa13.42□□□□□ -0.26
SNCB-202ENST00000393693 IGHV4-4A0A075B6R2 117 aa13.41□□□□□ -0.26
SNCB-202ENST00000393693 P01737 135 aa13.41□□□□□ -0.26
SNCB-202ENST00000393693 ZNF688P0C7X2 276 aa13.41□□□□□ -0.26
SNCB-202ENST00000393693 HIST1H1AQ02539 215 aaPredicted RBP13.41□□□□□ -0.26
SNCB-202ENST00000393693 PSMG4Q5JS54 123 aa13.41□□□□□ -0.26
SNCB-202ENST00000393693 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
SNCB-202ENST00000393693 OR4B1Q8NGF8 309 aa13.41□□□□□ -0.26
SNCB-202ENST00000393693 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
SNCB-202ENST00000393693 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
SNCB-202ENST00000393693 RYR1P21817 5038 aa13.4□□□□□ -0.26
SNCB-202ENST00000393693 TRAV10A0A0B4J240 114 aa13.4□□□□□ -0.26
SNCB-202ENST00000393693 DUSP14O95147 198 aaKnown RBP13.4□□□□□ -0.26
SNCB-202ENST00000393693 PRB4P10163 310 aaPredicted RBP13.4□□□□□ -0.26
SNCB-202ENST00000393693 MIFP14174 115 aa13.4□□□□□ -0.26
SNCB-202ENST00000393693 Q8TAT8 98 aa13.4□□□□□ -0.26
SNCB-202ENST00000393693 ZC2HC1AQ96GY0 325 aa13.4□□□□□ -0.26
SNCB-202ENST00000393693 IL36BQ9NZH7 164 aa13.4□□□□□ -0.26
SNCB-202ENST00000393693 V9GYV3 84 aa13.4□□□□□ -0.26
SNCB-202ENST00000393693 AGRNO00468 2067 aa13.4□□□□□ -0.27
SNCB-202ENST00000393693 TRBV7-9A0A0J9YWB2 115 aa13.39□□□□□ -0.27
SNCB-202ENST00000393693 RPL19P84098 196 aaKnown RBP13.39□□□□□ -0.27
SNCB-202ENST00000393693 ACTL10Q5JWF8 245 aa13.39□□□□□ -0.27
SNCB-202ENST00000393693 MORN3Q6PF18 240 aaPredicted RBP13.39□□□□□ -0.27
SNCB-202ENST00000393693 C8orf49Q96NF6 230 aa13.39□□□□□ -0.27
SNCB-202ENST00000393693 CELA1Q9UNI1 258 aa13.39□□□□□ -0.27
SNCB-202ENST00000393693 URGCP-MRPS24S4R325 110 aa13.39□□□□□ -0.27
SNCB-202ENST00000393693 TRAV9-1A0A075B6T8 112 aa13.38□□□□□ -0.27
SNCB-202ENST00000393693 C19orf71A6NCJ1 209 aa13.38□□□□□ -0.27
SNCB-202ENST00000393693 ELOBQ15370 118 aa13.38□□□□□ -0.27
SNCB-202ENST00000393693 CT83Q5H943 113 aa13.38□□□□□ -0.27
SNCB-202ENST00000393693 FAM162BQ5T6X4 162 aa13.38□□□□□ -0.27
SNCB-202ENST00000393693 FOXI2Q6ZQN5 318 aa13.38□□□□□ -0.27
SNCB-202ENST00000393693 CSNK1G2-AS1Q8NCQ2 148 aa13.38□□□□□ -0.27
SNCB-202ENST00000393693 RPP21Q9H633 154 aaKnown RBP13.38□□□□□ -0.27
SNCB-202ENST00000393693 DYNC1H1Q14204 4646 aaKnown RBP13.37□□□□□ -0.27
SNCB-202ENST00000393693 A0A1B0GVY2 172 aa13.37□□□□□ -0.27
SNCB-202ENST00000393693 COLCA2A8K830 154 aa13.37□□□□□ -0.27
SNCB-202ENST00000393693 A8MWL6 223 aa13.37□□□□□ -0.27
SNCB-202ENST00000393693 PFN1P07737 140 aaKnown RBP13.37□□□□□ -0.27
SNCB-202ENST00000393693 FABP5P3A8MUU1 101 aa13.36□□□□□ -0.27
SNCB-202ENST00000393693 ZNF705DP0CH99 300 aaPredicted RBP13.36□□□□□ -0.27
SNCB-202ENST00000393693 ZNF705BP0CI00 300 aaPredicted RBP13.36□□□□□ -0.27
SNCB-202ENST00000393693 C12orf74Q32Q52 190 aa13.36□□□□□ -0.27
SNCB-202ENST00000393693 TRBV24-1A0A075B6N3 115 aa13.35□□□□□ -0.27
SNCB-202ENST00000393693 A0A0J9YX75 114 aa13.35□□□□□ -0.27
SNCB-202ENST00000393693 XKRY2A2RUG3 117 aa13.35□□□□□ -0.27
SNCB-202ENST00000393693 F6UB75 175 aa13.35□□□□□ -0.27
SNCB-202ENST00000393693 LEPP41159 167 aa13.35□□□□□ -0.27
SNCB-202ENST00000393693 RPS20P60866 119 aaKnown RBP13.35□□□□□ -0.27
SNCB-202ENST00000393693 LINC00336Q6ZUF6 198 aa13.35□□□□□ -0.27
SNCB-202ENST00000393693 YPEL4Q96NS1 127 aa13.35□□□□□ -0.27
SNCB-202ENST00000393693 ODF3Q96PU9 254 aa13.35□□□□□ -0.27
SNCB-202ENST00000393693 SAV1Q9H4B6 383 aaPredicted RBP13.35□□□□□ -0.27
SNCB-202ENST00000393693 PKHD1P08F94 4074 aa13.34□□□□□ -0.27
SNCB-202ENST00000393693 DEFB131BA0A096LNP1 70 aa13.34□□□□□ -0.27
SNCB-202ENST00000393693 A0A1W2PPQ1 181 aa13.34□□□□□ -0.27
SNCB-202ENST00000393693 SH2D1AO60880 128 aa13.34□□□□□ -0.27
SNCB-202ENST00000393693 OR2D3Q8NGH3 330 aa13.34□□□□□ -0.27
SNCB-202ENST00000393693 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
SNCB-202ENST00000393693 FAM210BQ96KR6 192 aa13.34□□□□□ -0.27
SNCB-202ENST00000393693 DNAH11Q96DT5 4516 aa13.34□□□□□ -0.27
SNCB-202ENST00000393693 SMIM27A0A1W2PRY6 76 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 TMEM189A5PLL7 270 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 FAM231BA6NCW3 169 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 M0R2N4 97 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 GPX1P07203 203 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 TSPOP30536 169 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 CRIP1P50238 77 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 FAM3BP58499 235 aaPredicted RBP13.33□□□□□ -0.28
SNCB-202ENST00000393693 PYGO2Q9BRQ0 406 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 GFRA4Q9GZZ7 299 aa13.33□□□□□ -0.28
SNCB-202ENST00000393693 TGIF2-C20orf24A0A0A6YYL0 155 aa13.32□□□□□ -0.28
SNCB-202ENST00000393693 CRISP2P16562 243 aa13.32□□□□□ -0.28
SNCB-202ENST00000393693 RAB5AP20339 215 aa13.32□□□□□ -0.28
SNCB-202ENST00000393693 DEFB1P60022 68 aa13.32□□□□□ -0.28
SNCB-202ENST00000393693 FAM19A4Q96LR4 140 aa13.32□□□□□ -0.28
SNCB-202ENST00000393693 NAT8BQ9UHF3 227 aa13.32□□□□□ -0.28
SNCB-202ENST00000393693 TRAV21A0A0B4J279 112 aa13.31□□□□□ -0.28
SNCB-202ENST00000393693 RTL8CO15255 209 aa13.31□□□□□ -0.28
SNCB-202ENST00000393693 AMBPP02760 352 aa13.31□□□□□ -0.28
SNCB-202ENST00000393693 CXCL1P09341 107 aa13.31□□□□□ -0.28
SNCB-202ENST00000393693 POM121L12Q8N7R1 296 aa13.31□□□□□ -0.28
SNCB-202ENST00000393693 XCL2Q9UBD3 114 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms