RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 Q8N1X5 172 aa12.39□□□□□ -0.43
PDLIM7-205ENST00000393551 ARL6IP6Q8N6S5 226 aa12.39□□□□□ -0.43
PDLIM7-205ENST00000393551 OR10G9Q8NGN4 311 aa12.39□□□□□ -0.43
PDLIM7-205ENST00000393551 OR10G7Q8NGN6 311 aa12.39□□□□□ -0.43
PDLIM7-205ENST00000393551 CMTM2Q8TAZ6 248 aa12.39□□□□□ -0.43
PDLIM7-205ENST00000393551 ARL14EPLP0DKL9 152 aa12.38□□□□□ -0.43
PDLIM7-205ENST00000393551 GYPEP15421 78 aa12.38□□□□□ -0.43
PDLIM7-205ENST00000393551 SGK494Q96LW2 274 aa12.38□□□□□ -0.43
PDLIM7-205ENST00000393551 TRAV4A0A0B4J268 109 aa12.37□□□□□ -0.43
PDLIM7-205ENST00000393551 LOC100131303A0A0U1RQF7 123 aa12.37□□□□□ -0.43
PDLIM7-205ENST00000393551 M0R2P5 195 aa12.37□□□□□ -0.43
PDLIM7-205ENST00000393551 SRIP30626 198 aa12.37□□□□□ -0.43
PDLIM7-205ENST00000393551 FAM74A1Q5RGS3 127 aa12.37□□□□□ -0.43
PDLIM7-205ENST00000393551 TREM1Q9NP99 234 aa12.37□□□□□ -0.43
PDLIM7-205ENST00000393551 C11orf21Q9P2W6 132 aa12.37□□□□□ -0.43
PDLIM7-205ENST00000393551 TRAV21A0A0B4J279 112 aa12.36□□□□□ -0.43
PDLIM7-205ENST00000393551 STAG3L2P0CL84 134 aa12.36□□□□□ -0.43
PDLIM7-205ENST00000393551 STAG3L3P0CL85 134 aa12.36□□□□□ -0.43
PDLIM7-205ENST00000393551 ZNF80P51504 273 aaPredicted RBP12.36□□□□□ -0.43
PDLIM7-205ENST00000393551 Q5BKY6 102 aa12.36□□□□□ -0.43
PDLIM7-205ENST00000393551 OR2G3Q8NGZ4 309 aa12.36□□□□□ -0.43
PDLIM7-205ENST00000393551 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
PDLIM7-205ENST00000393551 C1QBP02746 253 aa12.35□□□□□ -0.43
PDLIM7-205ENST00000393551 DNAH10OSP0CZ25 163 aa12.35□□□□□ -0.43
PDLIM7-205ENST00000393551 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-205ENST00000393551 HSD17B11Q8NBQ5 300 aa12.35□□□□□ -0.43
PDLIM7-205ENST00000393551 OR4C5Q8NGB2 326 aa12.35□□□□□ -0.43
PDLIM7-205ENST00000393551 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
PDLIM7-205ENST00000393551 SCRT2Q9NQ03 307 aa12.35□□□□□ -0.43
PDLIM7-205ENST00000393551 LY96Q9Y6Y9 160 aa12.35□□□□□ -0.43
PDLIM7-205ENST00000393551 IGLV2-11P01706 119 aa12.34□□□□□ -0.43
PDLIM7-205ENST00000393551 ORM1P02763 201 aa12.34□□□□□ -0.43
PDLIM7-205ENST00000393551 TCRAP04437 139 aa12.34□□□□□ -0.43
PDLIM7-205ENST00000393551 ATP6V0CP27449 155 aa12.34□□□□□ -0.43
PDLIM7-205ENST00000393551 AQP10Q96PS8 301 aa12.34□□□□□ -0.43
PDLIM7-205ENST00000393551 GCHFRP30047 84 aa12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 ZFP69Q49AA0 526 aa12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 OR2T35Q8NGX2 323 aa12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 PCNPQ8WW12 178 aaKnown RBP12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 PSMG3Q9BT73 122 aaPredicted RBP12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 SH3BGRL3Q9H299 93 aa12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 SDF2L1Q9HCN8 221 aa12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 PGPEP1Q9NXJ5 209 aa12.33□□□□□ -0.44
PDLIM7-205ENST00000393551 A0A087WTM6 91 aa12.32□□□□□ -0.44
PDLIM7-205ENST00000393551 C9JCJ5 164 aa12.32□□□□□ -0.44
PDLIM7-205ENST00000393551 GATA1P15976 413 aaPredicted RBP12.32□□□□□ -0.44
PDLIM7-205ENST00000393551 TMEM75Q8N9X5 138 aa12.32□□□□□ -0.44
PDLIM7-205ENST00000393551 C5orf17Q8NAS9 161 aa12.32□□□□□ -0.44
PDLIM7-205ENST00000393551 KCNS1Q96KK3 526 aa12.32□□□□□ -0.44
PDLIM7-205ENST00000393551 DNAH8Q96JB1 4490 aa12.31□□□□□ -0.44
PDLIM7-205ENST00000393551 GGTLC3B5MD39 225 aa12.31□□□□□ -0.44
PDLIM7-205ENST00000393551 ERVFC1-1P60608 527 aa12.31□□□□□ -0.44
PDLIM7-205ENST00000393551 NFE4Q86UQ8 179 aa12.31□□□□□ -0.44
PDLIM7-205ENST00000393551 TXNDC17Q9BRA2 123 aa12.31□□□□□ -0.44
PDLIM7-205ENST00000393551 MSRB1Q9NZV6 116 aa12.31□□□□□ -0.44
PDLIM7-205ENST00000393551 TRAV9-2A0A087WT02 112 aa12.3□□□□□ -0.44
PDLIM7-205ENST00000393551 SUMO1P63165 101 aaKnown RBP12.3□□□□□ -0.44
PDLIM7-205ENST00000393551 CFAP126Q5VTH2 177 aa12.3□□□□□ -0.44
PDLIM7-205ENST00000393551 SLC25A29Q8N8R3 303 aa12.3□□□□□ -0.44
PDLIM7-205ENST00000393551 PSG8Q9UQ74 426 aa12.3□□□□□ -0.44
PDLIM7-205ENST00000393551 VPS13BQ7Z7G8 4022 aa12.3□□□□□ -0.44
PDLIM7-205ENST00000393551 SERTM2A0A1B0GWG4 89 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 HMSDA8MTL9 139 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 K7EP13 123 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 GCGP01275 180 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 EVI2AP22794 236 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 XGP55808 180 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 SERF2P84101 59 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 ZNF876PQ49A33 203 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
PDLIM7-205ENST00000393551 RNF222A6NCQ9 220 aa12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 RS1O15537 224 aa12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 CRYGDP07320 174 aa12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 RNASE3P12724 160 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 TIRAPP58753 221 aa12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 KRTAP10-1P60331 282 aa12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 FLI1Q01543 452 aaPredicted RBP12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 CDPF1Q6NVV7 123 aa12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 NDFIP1Q9BT67 221 aa12.28□□□□□ -0.44
PDLIM7-205ENST00000393551 HERC1Q15751 4861 aa12.27□□□□□ -0.44
PDLIM7-205ENST00000393551 PGPEP1LA6NFU8 196 aa12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 FBLL1A6NHQ2 334 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 TAAR5O14804 337 aa12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 PFN1P07737 140 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 ZNF726P1Q15940 193 aa12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 PRNTQ86SH4 94 aa12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 NHLRC2Q8NBF2 726 aa12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 LINC00479Q96M42 142 aa12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 TNFSF18Q9UNG2 199 aa12.27□□□□□ -0.45
PDLIM7-205ENST00000393551 IGHV3-73A0A0B4J1V6 119 aa12.26□□□□□ -0.45
PDLIM7-205ENST00000393551 EREGO14944 169 aa12.26□□□□□ -0.45
PDLIM7-205ENST00000393551 CXorf1O96002 111 aa12.26□□□□□ -0.45
PDLIM7-205ENST00000393551 MBP02144 154 aa12.26□□□□□ -0.45
PDLIM7-205ENST00000393551 ZNF506Q5JVG8 444 aa12.26□□□□□ -0.45
PDLIM7-205ENST00000393551 RPL7L1Q6DKI1 246 aaKnown RBP12.26□□□□□ -0.45
PDLIM7-205ENST00000393551 CYB561D1Q8N8Q1 229 aa12.26□□□□□ -0.45
PDLIM7-205ENST00000393551 ACTR3CQ9C0K3 210 aaPredicted RBP12.26□□□□□ -0.45
PDLIM7-205ENST00000393551 TMEM167BQ9NRX6 74 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms