RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 IGHV4-4A0A075B6R2 117 aa19.29■□□□□ 0.68
SMARCD3-203ENST00000392811 MAP1LC3AQ9H492 121 aa19.29■□□□□ 0.68
SMARCD3-203ENST00000392811 FXYD7P58549 80 aa19.29■□□□□ 0.68
SMARCD3-203ENST00000392811 SPANXN1Q5VSR9 72 aa19.29■□□□□ 0.68
SMARCD3-203ENST00000392811 WFDC3Q8IUB2 231 aa19.29■□□□□ 0.68
SMARCD3-203ENST00000392811 MYOZ3Q8TDC0 251 aa19.29■□□□□ 0.68
SMARCD3-203ENST00000392811 LAMTOR2Q9Y2Q5 125 aa19.29■□□□□ 0.68
SMARCD3-203ENST00000392811 TNFRSF6BO95407 300 aa19.28■□□□□ 0.68
SMARCD3-203ENST00000392811 ELANEP08246 267 aa19.28■□□□□ 0.68
SMARCD3-203ENST00000392811 RNASE4P34096 147 aaKnown RBP19.28■□□□□ 0.68
SMARCD3-203ENST00000392811 CACNG7P62955 275 aa19.28■□□□□ 0.68
SMARCD3-203ENST00000392811 LINC01545Q5VT33 79 aa19.28■□□□□ 0.68
SMARCD3-203ENST00000392811 LGALS1P09382 135 aaKnown RBP19.27■□□□□ 0.68
SMARCD3-203ENST00000392811 GATA1P15976 413 aaPredicted RBP19.27■□□□□ 0.68
SMARCD3-203ENST00000392811 ID1P41134 155 aa19.27■□□□□ 0.68
SMARCD3-203ENST00000392811 KIR3DS1Q14943 382 aa19.27■□□□□ 0.68
SMARCD3-203ENST00000392811 APRG1Q8IVJ8 170 aa19.27■□□□□ 0.68
SMARCD3-203ENST00000392811 hDV102S1A0JD36 115 aa19.27■□□□□ 0.67
SMARCD3-203ENST00000392811 HNRNPA3P51991 378 aaKnown RBP19.27■□□□□ 0.67
SMARCD3-203ENST00000392811 SMIM15Q7Z3B0 74 aa19.27■□□□□ 0.67
SMARCD3-203ENST00000392811 PMCHL2Q9BQD1 86 aa19.27■□□□□ 0.67
SMARCD3-203ENST00000392811 TRBV7-9A0A0J9YWB2 115 aa19.26■□□□□ 0.67
SMARCD3-203ENST00000392811 HBDP02042 147 aa19.26■□□□□ 0.67
SMARCD3-203ENST00000392811 NUTF2P61970 127 aaKnown RBP19.26■□□□□ 0.67
SMARCD3-203ENST00000392811 SAMD13Q5VXD3 122 aa19.25■□□□□ 0.67
SMARCD3-203ENST00000392811 IGHV4OR15-8A0A075B7B6 117 aa19.25■□□□□ 0.67
SMARCD3-203ENST00000392811 A0A087WW49 117 aa19.25■□□□□ 0.67
SMARCD3-203ENST00000392811 ANXA2RQ3ZCQ2 193 aa19.25■□□□□ 0.67
SMARCD3-203ENST00000392811 MS4A6AQ9H2W1 248 aa19.25■□□□□ 0.67
SMARCD3-203ENST00000392811 MXRA5Q9NR99 2828 aa19.24■□□□□ 0.67
SMARCD3-203ENST00000392811 SYNJ2BPP57105 145 aa19.24■□□□□ 0.67
SMARCD3-203ENST00000392811 ST20Q9HBF5 79 aa19.24■□□□□ 0.67
SMARCD3-203ENST00000392811 TSPOP30536 169 aa19.24■□□□□ 0.67
SMARCD3-203ENST00000392811 UBE2E2Q96LR5 201 aa19.24■□□□□ 0.67
SMARCD3-203ENST00000392811 DUX5Q96PT3 197 aa19.24■□□□□ 0.67
SMARCD3-203ENST00000392811 CREBBPQ92793 2442 aa19.23■□□□□ 0.67
SMARCD3-203ENST00000392811 LINC01546A6NGU7 62 aa19.23■□□□□ 0.67
SMARCD3-203ENST00000392811 TFPI2P48307 235 aa19.23■□□□□ 0.67
SMARCD3-203ENST00000392811 BATFQ16520 125 aa19.23■□□□□ 0.67
SMARCD3-203ENST00000392811 ZMAT5Q9UDW3 170 aaKnown RBP19.23■□□□□ 0.67
SMARCD3-203ENST00000392811 DOPEY2Q9Y3R5 2298 aa19.22■□□□□ 0.67
SMARCD3-203ENST00000392811 ASIPP42127 132 aa19.22■□□□□ 0.67
SMARCD3-203ENST00000392811 RNF152Q8N8N0 203 aa19.22■□□□□ 0.67
SMARCD3-203ENST00000392811 OR2K2Q8NGT1 345 aa19.22■□□□□ 0.67
SMARCD3-203ENST00000392811 NXT2Q9NPJ8 142 aaKnown RBP19.22■□□□□ 0.67
SMARCD3-203ENST00000392811 TEX15Q9BXT5 2789 aa19.21■□□□□ 0.67
SMARCD3-203ENST00000392811 TRAV26-2A0A0B4J265 109 aa19.21■□□□□ 0.67
SMARCD3-203ENST00000392811 SPRY2O43597 315 aa19.21■□□□□ 0.67
SMARCD3-203ENST00000392811 S100A4P26447 101 aaKnown RBP19.21■□□□□ 0.67
SMARCD3-203ENST00000392811 APCP25054 2843 aa19.21■□□□□ 0.67
SMARCD3-203ENST00000392811 HSBP1L1C9JCN9 74 aa19.2■□□□□ 0.66
SMARCD3-203ENST00000392811 LGALS9O00182 355 aa19.2■□□□□ 0.66
SMARCD3-203ENST00000392811 HOXD3P31249 432 aaPredicted RBP19.2■□□□□ 0.66
SMARCD3-203ENST00000392811 KLLNB2CW77 178 aa19.2■□□□□ 0.66
SMARCD3-203ENST00000392811 LINC00469Q8N7U9 141 aa19.2■□□□□ 0.66
SMARCD3-203ENST00000392811 NRACQ8N912 160 aa19.2■□□□□ 0.66
SMARCD3-203ENST00000392811 M0R381 172 aa19.19■□□□□ 0.66
SMARCD3-203ENST00000392811 GNRH2O43555 120 aa19.19■□□□□ 0.66
SMARCD3-203ENST00000392811 ZNF688P0C7X2 276 aa19.19■□□□□ 0.66
SMARCD3-203ENST00000392811 Q8N2B8 174 aa19.19■□□□□ 0.66
SMARCD3-203ENST00000392811 PSMG4Q5JS54 123 aa19.18■□□□□ 0.66
SMARCD3-203ENST00000392811 MRPS16Q9Y3D3 137 aaKnown RBP19.18■□□□□ 0.66
SMARCD3-203ENST00000392811 MED14OSP0DP75 135 aa19.18■□□□□ 0.66
SMARCD3-203ENST00000392811 SCRT2Q9NQ03 307 aa19.18■□□□□ 0.66
SMARCD3-203ENST00000392811 K7EQG2 157 aa19.17■□□□□ 0.66
SMARCD3-203ENST00000392811 LEPP41159 167 aa19.17■□□□□ 0.66
SMARCD3-203ENST00000392811 Q8N8P6 123 aa19.17■□□□□ 0.66
SMARCD3-203ENST00000392811 WFDC12Q8WWY7 111 aa19.17■□□□□ 0.66
SMARCD3-203ENST00000392811 IFI27L1Q96BM0 104 aa19.17■□□□□ 0.66
SMARCD3-203ENST00000392811 TP73-AS1Q9UF72 201 aa19.17■□□□□ 0.66
SMARCD3-203ENST00000392811 PHLDA3Q9Y5J5 127 aa19.17■□□□□ 0.66
SMARCD3-203ENST00000392811 IGLV2-18A0A075B6J9 118 aa19.17■□□□□ 0.66
SMARCD3-203ENST00000392811 FCER1GP30273 86 aa19.16■□□□□ 0.66
SMARCD3-203ENST00000392811 WFDC11Q8NEX6 87 aa19.16■□□□□ 0.66
SMARCD3-203ENST00000392811 RNASE3P12724 160 aaKnown RBP19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 SNRPD3P62318 126 aaKnown RBP19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 LGALS9BQ3B8N2 356 aa19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 LGALS9CQ6DKI2 356 aa19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 HIST2H2BCQ6DN03 193 aa19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 C18orf65Q6ZTR6 163 aa19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 PRSS47A8MTI9 375 aa19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 MRAP2Q96G30 205 aa19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 GOLT1BQ9Y3E0 138 aa19.15■□□□□ 0.66
SMARCD3-203ENST00000392811 DEFB125Q8N687 156 aa19.14■□□□□ 0.65
SMARCD3-203ENST00000392811 A0A0J9YX75 114 aa19.13■□□□□ 0.65
SMARCD3-203ENST00000392811 DEFB136Q30KP8 78 aa19.13■□□□□ 0.65
SMARCD3-203ENST00000392811 C18orf15Q96N68 181 aa19.13■□□□□ 0.65
SMARCD3-203ENST00000392811 TCAPO15273 167 aa19.12■□□□□ 0.65
SMARCD3-203ENST00000392811 C14orf178Q8N769 122 aaPredicted RBP19.12■□□□□ 0.65
SMARCD3-203ENST00000392811 DPH3P1Q9H4G8 78 aa19.12■□□□□ 0.65
SMARCD3-203ENST00000392811 TRAV12-3A0A0B4J271 114 aa19.11■□□□□ 0.65
SMARCD3-203ENST00000392811 SLURP1P55000 103 aa19.11■□□□□ 0.65
SMARCD3-203ENST00000392811 COL5A1-AS1Q5SY13 56 aa19.11■□□□□ 0.65
SMARCD3-203ENST00000392811 SLC25A34Q6PIV7 304 aa19.11■□□□□ 0.65
SMARCD3-203ENST00000392811 FAM159AQ6UWV7 190 aa19.11■□□□□ 0.65
SMARCD3-203ENST00000392811 ADAMTSL5Q6ZMM2 481 aa19.11■□□□□ 0.65
SMARCD3-203ENST00000392811 TMEM158Q8WZ71 300 aa19.11■□□□□ 0.65
SMARCD3-203ENST00000392811 ODF3Q96PU9 254 aa19.11■□□□□ 0.65
SMARCD3-203ENST00000392811 STPG4Q8N801 248 aa19.1■□□□□ 0.65
SMARCD3-203ENST00000392811 C7orf71A4D174 169 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms