RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 OTUD6BQ8N6M0 293 aa-2.68□□□□□ -2.84
RNU6-239P-201ENST00000390990 SLC22A13Q9Y226 551 aa-2.68□□□□□ -2.84
RNU6-239P-201ENST00000390990 SPCS1Q9Y6A9 102 aa-2.68□□□□□ -2.84
RNU6-239P-201ENST00000390990 RNF213Q63HN8 5207 aa-2.68□□□□□ -2.84
RNU6-239P-201ENST00000390990 A0A087WUJ7 227 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 FXYD6-FXYD2A0A087WZ82 144 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 RBAKDNA6NC62 111 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 CALB1P05937 261 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 IFT20Q8IY31 132 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 PTH2Q96A98 100 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 PARVBQ9HBI1 364 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 BATF3Q9NR55 127 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 VPS29Q9UBQ0 182 aa-2.69□□□□□ -2.84
RNU6-239P-201ENST00000390990 TRBV7-1A0A0A6YYK4 115 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 TRBV10-1A0A0K0K1A3 114 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 LOC107984640A0A0U1RRK4 108 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 YKT6O15498 198 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 IFNA7P01567 189 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 FADDQ13158 208 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 ITGB3BPQ13352 177 aaPredicted RBP-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 CCSMST1Q4G0I0 132 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 AKIRIN2Q53H80 203 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 FKBP1CQ5VVH2 108 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 UNQ5815/PRO19632Q6UWF5 114 aa-2.7□□□□□ -2.84
RNU6-239P-201ENST00000390990 PIK3C2AO00443 1686 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 TRBV10-3A0A0K0K1G6 114 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 TMEM189A5PLL7 270 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 CLDN24A6NM45 220 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 TNFP01375 233 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 SERPINA6P08185 405 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 SPRR1BP22528 89 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 CLDN22Q8N7P3 220 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 CLEC2BQ92478 149 aa-2.71□□□□□ -2.84
RNU6-239P-201ENST00000390990 RTL9Q8NET4 1388 aa-2.72□□□□□ -2.84
RNU6-239P-201ENST00000390990 DEXIO95424 95 aa-2.72□□□□□ -2.84
RNU6-239P-201ENST00000390990 MT-ND6P03923 174 aa-2.72□□□□□ -2.84
RNU6-239P-201ENST00000390990 NDUFA6P56556 154 aa-2.72□□□□□ -2.84
RNU6-239P-201ENST00000390990 MRPS36P82909 103 aaKnown RBP-2.72□□□□□ -2.84
RNU6-239P-201ENST00000390990 TRIM4Q9C037 500 aa-2.72□□□□□ -2.84
RNU6-239P-201ENST00000390990 PLXNB2O15031 1838 aa-2.72□□□□□ -2.85
RNU6-239P-201ENST00000390990 AKAP9Q99996 3911 aa-2.73□□□□□ -2.85
RNU6-239P-201ENST00000390990 DNAH9Q9NYC9 4486 aa-2.73□□□□□ -2.85
RNU6-239P-201ENST00000390990 TRGV1A0A0A0MS02 117 aa-2.73□□□□□ -2.85
RNU6-239P-201ENST00000390990 IFITM5A6NNB3 132 aa-2.73□□□□□ -2.85
RNU6-239P-201ENST00000390990 HBBP68871 147 aa-2.73□□□□□ -2.85
RNU6-239P-201ENST00000390990 TAF9BQ9HBM6 251 aa-2.73□□□□□ -2.85
RNU6-239P-201ENST00000390990 MPC1Q9Y5U8 109 aa-2.73□□□□□ -2.85
RNU6-239P-201ENST00000390990 LRP5O75197 1615 aa-2.73□□□□□ -2.85
RNU6-239P-201ENST00000390990 PRRC2CQ9Y520 2896 aaKnown RBP-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 SIPA1L3O60292 1781 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 NIPBLQ6KC79 2804 aaeCLIP-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 OR2H2O95918 312 aa-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 APOC1P02654 83 aa-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 SKP1P63208 163 aa-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 CHMP4BQ9H444 224 aaKnown RBP-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 PRELID3BQ9Y3B1 194 aa-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 ARAP1Q96P48 1450 aa-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 TEP1Q99973 2627 aaKnown RBP-2.74□□□□□ -2.85
RNU6-239P-201ENST00000390990 BCE1O60756 84 aa-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 EDF1O60869 148 aaKnown RBP-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 TRGC2P03986 189 aa-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 TFF1P04155 84 aa-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 DCDP81605 110 aaKnown RBP-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 SLC48A1Q6P1K1 146 aa-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 PHF5AQ7RTV0 110 aaKnown RBP-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 TRAPPC5Q8IUR0 188 aa-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 GUCA1BQ9UMX6 200 aa-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 TANC2Q9HCD6 1990 aa-2.75□□□□□ -2.85
RNU6-239P-201ENST00000390990 ERICH2A1L162 156 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 C5orf58C9J3I9 102 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 APOC4-APOC2K7ER74 178 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 PIN1P1O15428 100 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 MFSD11O43934 449 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 BANF1O75531 89 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 IFNA16P05015 189 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 RPL35P42766 123 aaKnown RBP-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 HADHBP55084 474 aaKnown RBP-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 FAM9CQ8IZT9 166 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 DIRC1Q969H9 104 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 TP53AIP1Q9HCN2 124 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 USE1Q9NZ43 259 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 CUBNO60494 3623 aa-2.76□□□□□ -2.85
RNU6-239P-201ENST00000390990 CASZ1Q86V15 1759 aa-2.77□□□□□ -2.85
RNU6-239P-201ENST00000390990 CCL3L1P16619 93 aa-2.77□□□□□ -2.85
RNU6-239P-201ENST00000390990 HIST1H3AP68431 136 aa-2.77□□□□□ -2.85
RNU6-239P-201ENST00000390990 C4orf33Q8N1A6 199 aa-2.77□□□□□ -2.85
RNU6-239P-201ENST00000390990 OR2H1Q9GZK4 316 aa-2.77□□□□□ -2.85
RNU6-239P-201ENST00000390990 FXYD6Q9H0Q3 95 aa-2.77□□□□□ -2.85
RNU6-239P-201ENST00000390990 CD109Q6YHK3 1445 aa-2.77□□□□□ -2.85
RNU6-239P-201ENST00000390990 A0A1B0GW64 132 aa-2.78□□□□□ -2.85
RNU6-239P-201ENST00000390990 I3L2K1 104 aa-2.78□□□□□ -2.85
RNU6-239P-201ENST00000390990 TPM1P09493 284 aa-2.78□□□□□ -2.85
RNU6-239P-201ENST00000390990 GTF2A1P52655 376 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-239P-201ENST00000390990 GPX7Q96SL4 187 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-239P-201ENST00000390990 FKBP11Q9NYL4 201 aa-2.78□□□□□ -2.85
RNU6-239P-201ENST00000390990 LAMA3Q16787 3333 aa-2.78□□□□□ -2.85
RNU6-239P-201ENST00000390990 PLECQ15149 4684 aaKnown RBP-2.78□□□□□ -2.85
RNU6-239P-201ENST00000390990 TCRBV3S1A0A5B6 114 aa-2.79□□□□□ -2.86
RNU6-239P-201ENST00000390990 TMEM210A6NLX4 147 aa-2.79□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms