RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 C12orf74Q32Q52 190 aa12.61□□□□□ -0.39
CD9-202ENST00000382515 Q6ZQT7 251 aa12.61□□□□□ -0.39
CD9-202ENST00000382515 ZC2HC1AQ96GY0 325 aa12.61□□□□□ -0.39
CD9-202ENST00000382515 NOP10Q9NPE3 64 aaKnown RBP12.61□□□□□ -0.39
CD9-202ENST00000382515 DNAH7Q8WXX0 4024 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 TRAV10A0A0B4J240 114 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 C9JCJ5 164 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 CRIP1P50238 77 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 TOR2AQ5JU69 321 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 PHLDA1Q8WV24 401 aaPredicted RBP12.6□□□□□ -0.39
CD9-202ENST00000382515 C18orf15Q96N68 181 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 GSN-AS1Q9NRJ2 163 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 NAGKQ9UJ70 344 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 CELA1Q9UNI1 258 aa12.6□□□□□ -0.39
CD9-202ENST00000382515 KLK5Q9Y337 293 aaPredicted RBP12.6□□□□□ -0.39
CD9-202ENST00000382515 CEMP1Q6PRD7 247 aaPredicted RBP12.59□□□□□ -0.39
CD9-202ENST00000382515 LINC00612Q8N6U2 182 aa12.59□□□□□ -0.39
CD9-202ENST00000382515 NDUFAF3Q9BU61 184 aa12.59□□□□□ -0.39
CD9-202ENST00000382515 DERL1Q9BUN8 251 aa12.59□□□□□ -0.39
CD9-202ENST00000382515 GNRH2O43555 120 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 SPINK4O60575 86 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 ORM1P02763 201 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 TCTAP57738 103 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 CLLU1Q5K131 121 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 DNLZQ5SXM8 178 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 CASC10Q5T4H9 136 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 FAM210BQ96KR6 192 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 LY96Q9Y6Y9 160 aa12.58□□□□□ -0.4
CD9-202ENST00000382515 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 IGHV3-16A0A0C4DH30 117 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 SH2D1AO60880 128 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 TYMSP04818 313 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 FAM74A3Q4VXF1 159 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 Q6ZTC4 211 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 RASL10AQ92737 203 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 PTH2Q96A98 100 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 DAZAP1Q96EP5 407 aaKnown RBP12.57□□□□□ -0.4
CD9-202ENST00000382515 PARLQ9H300 379 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 MDFICQ9P1T7 246 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 C11orf21Q9P2W6 132 aa12.57□□□□□ -0.4
CD9-202ENST00000382515 RAB19A4D1S5 217 aa12.56□□□□□ -0.4
CD9-202ENST00000382515 B4DEV8 164 aa12.56□□□□□ -0.4
CD9-202ENST00000382515 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
CD9-202ENST00000382515 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
CD9-202ENST00000382515 CXCL1P09341 107 aa12.56□□□□□ -0.4
CD9-202ENST00000382515 DEFB130BP0DP73 79 aa12.56□□□□□ -0.4
CD9-202ENST00000382515 DEFB130AP0DP74 79 aa12.56□□□□□ -0.4
CD9-202ENST00000382515 PIK3CD-AS1Q5SR53 167 aa12.56□□□□□ -0.4
CD9-202ENST00000382515 DEFB131BA0A096LNP1 70 aa12.55□□□□□ -0.4
CD9-202ENST00000382515 M0R2P5 195 aa12.55□□□□□ -0.4
CD9-202ENST00000382515 ATP5G1P05496 136 aa12.55□□□□□ -0.4
CD9-202ENST00000382515 SRP19P09132 144 aaKnown RBP12.55□□□□□ -0.4
CD9-202ENST00000382515 S100A4P26447 101 aaKnown RBP12.55□□□□□ -0.4
CD9-202ENST00000382515 IFITM2Q01629 132 aa12.55□□□□□ -0.4
CD9-202ENST00000382515 NHLRC2Q8NBF2 726 aa12.55□□□□□ -0.4
CD9-202ENST00000382515 PCNPQ8WW12 178 aaKnown RBP12.55□□□□□ -0.4
CD9-202ENST00000382515 TRBV20OR9-2A0A075B6H5 130 aa12.54□□□□□ -0.4
CD9-202ENST00000382515 MGST1P10620 155 aaKnown RBP12.54□□□□□ -0.4
CD9-202ENST00000382515 ASIPP42127 132 aa12.54□□□□□ -0.4
CD9-202ENST00000382515 IL36BQ9NZH7 164 aa12.54□□□□□ -0.4
CD9-202ENST00000382515 TRGV2A0A075B6R0 118 aa12.53□□□□□ -0.4
CD9-202ENST00000382515 TRGV1A0A0A0MS02 117 aa12.53□□□□□ -0.4
CD9-202ENST00000382515 XKRY2A2RUG3 117 aa12.53□□□□□ -0.4
CD9-202ENST00000382515 CIDEAO60543 219 aa12.53□□□□□ -0.4
CD9-202ENST00000382515 RPS20P60866 119 aaKnown RBP12.53□□□□□ -0.4
CD9-202ENST00000382515 ZFAND6Q6FIF0 208 aa12.53□□□□□ -0.4
CD9-202ENST00000382515 OCC1Q8TAD7 63 aa12.53□□□□□ -0.4
CD9-202ENST00000382515 SMIM7Q9BQ49 75 aa12.53□□□□□ -0.4
CD9-202ENST00000382515 GAGE12BA1L429 117 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 ZNF727A8MUV8 499 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 GAGE7O76087 117 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 SLAQ13239 276 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 OR5I1Q13606 314 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 PRR27Q6MZM9 219 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 Q6ZTI0 123 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 C9orf85Q96MD7 179 aa12.52□□□□□ -0.41
CD9-202ENST00000382515 C19orf71A6NCJ1 209 aa12.51□□□□□ -0.41
CD9-202ENST00000382515 MED14OSP0DP75 135 aa12.51□□□□□ -0.41
CD9-202ENST00000382515 RNASE3P12724 160 aaKnown RBP12.51□□□□□ -0.41
CD9-202ENST00000382515 CEBPGP53567 150 aa12.51□□□□□ -0.41
CD9-202ENST00000382515 M0R036 132 aa12.5□□□□□ -0.41
CD9-202ENST00000382515 P01737 135 aa12.5□□□□□ -0.41
CD9-202ENST00000382515 TMEM241Q24JQ0 296 aa12.49□□□□□ -0.41
CD9-202ENST00000382515 ZNF876PQ49A33 203 aa12.49□□□□□ -0.41
CD9-202ENST00000382515 SOHLH1Q5JUK2 328 aa12.49□□□□□ -0.41
CD9-202ENST00000382515 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
CD9-202ENST00000382515 ARMS2P0C7Q2 107 aa12.48□□□□□ -0.41
CD9-202ENST00000382515 FAM231DQ6ZW35 169 aa12.48□□□□□ -0.41
CD9-202ENST00000382515 ZNF575Q86XF7 245 aa12.48□□□□□ -0.41
CD9-202ENST00000382515 SYT8Q8NBV8 401 aa12.48□□□□□ -0.41
CD9-202ENST00000382515 SSBP4Q9BWG4 385 aaPredicted RBP12.48□□□□□ -0.41
CD9-202ENST00000382515 PGPEP1LA6NFU8 196 aa12.47□□□□□ -0.41
CD9-202ENST00000382515 IGLL5B9A064 214 aa12.47□□□□□ -0.41
CD9-202ENST00000382515 F5H768 121 aa12.47□□□□□ -0.41
CD9-202ENST00000382515 H3BNG1 76 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms