RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 C15orf65H3BRN8 121 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 C8orf31Q8N9H6 132 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 B5MCH6 92 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 TCTEX1D4Q5JR98 221 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 XCL2Q9UBD3 114 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 ZNF503-AS2A6NEH8 195 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 RSPO1Q2MKA7 263 aaPredicted RBP11.06□□□□□ -0.64
SNPH-201ENST00000381867 NDUFA4O00483 81 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 TMEM258P61165 79 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 ASPHD1Q5U4P2 390 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 ZNRF2Q8NHG8 242 aa11.06□□□□□ -0.64
SNPH-201ENST00000381867 LINC01619G3V211 115 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 IGLC1P0CG04 106 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 KRTAP27-1Q3LI81 207 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 SS18L2Q9UHA2 77 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 Q8NFD4 153 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 SHISA9B4DS77 424 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 K7EMI3 77 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 NXPH4O95158 308 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 LOXP28300 417 aaPredicted RBP11.05□□□□□ -0.64
SNPH-201ENST00000381867 Q6ZSR3 168 aa11.05□□□□□ -0.64
SNPH-201ENST00000381867 TRAV12-1A0A0B4J245 112 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 IGHV3-38A0A0C4DH36 116 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 HOXD3P31249 432 aaPredicted RBP11.04□□□□□ -0.64
SNPH-201ENST00000381867 FBXL19-AS1Q494R0 122 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 PCP2Q8IVA1 136 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 NKAPP1Q8N9T2 125 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 TRAV25A0A0B4J276 109 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 DAZAP2Q15038 168 aaPredicted RBP11.04□□□□□ -0.64
SNPH-201ENST00000381867 ZNF493Q6ZR52 646 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 MUC22E2RYF6 1773 aaPredicted RBP11.04□□□□□ -0.64
SNPH-201ENST00000381867 HEATR5AQ86XA9 2040 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 G3V318 75 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 ACYP1P07311 99 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 FAM120AOSQ5T036 256 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 TINCRA0A1B0GVN0 87 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 HEATR1Q9H583 2144 aaKnown RBP11.04□□□□□ -0.64
SNPH-201ENST00000381867 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
SNPH-201ENST00000381867 C10orf142B7Z368 130 aa11.03□□□□□ -0.64
SNPH-201ENST00000381867 TEX48A0A1B0GUV7 120 aa11.03□□□□□ -0.64
SNPH-201ENST00000381867 RBM3P98179 157 aaKnown RBP11.03□□□□□ -0.64
SNPH-201ENST00000381867 POU2AF1Q16633 256 aa11.03□□□□□ -0.64
SNPH-201ENST00000381867 CFHR3Q02985 330 aa11.03□□□□□ -0.64
SNPH-201ENST00000381867 DIDO1Q9BTC0 2240 aaKnown RBP11.03□□□□□ -0.64
SNPH-201ENST00000381867 IGLL5B9A064 214 aa11.02□□□□□ -0.64
SNPH-201ENST00000381867 ZNF134P52741 427 aa11.02□□□□□ -0.64
SNPH-201ENST00000381867 PHF3Q92576 2039 aaKnown RBP11.02□□□□□ -0.64
SNPH-201ENST00000381867 ZNF407Q9C0G0 2248 aa11.02□□□□□ -0.64
SNPH-201ENST00000381867 TRAV12-2A0A075B6T6 113 aa11.02□□□□□ -0.65
SNPH-201ENST00000381867 DUX4L9Q6RFH8 374 aaPredicted RBP11.02□□□□□ -0.65
SNPH-201ENST00000381867 FER1L5A0AVI2 2057 aa11.02□□□□□ -0.65
SNPH-201ENST00000381867 F5H768 121 aa11.02□□□□□ -0.65
SNPH-201ENST00000381867 RHOHQ15669 191 aa11.02□□□□□ -0.65
SNPH-201ENST00000381867 DAD1P61803 113 aa11.01□□□□□ -0.65
SNPH-201ENST00000381867 MUC6Q6W4X9 2439 aa11.01□□□□□ -0.65
SNPH-201ENST00000381867 DENND4AQ7Z401 1863 aa11.01□□□□□ -0.65
SNPH-201ENST00000381867 TMEM131Q92545 1883 aa11.01□□□□□ -0.65
SNPH-201ENST00000381867 TTC28Q96AY4 2481 aa11.01□□□□□ -0.65
SNPH-201ENST00000381867 BAALC-AS2P0C853 105 aa11.01□□□□□ -0.65
SNPH-201ENST00000381867 LINC01545Q5VT33 79 aa11□□□□□ -0.65
SNPH-201ENST00000381867 SH2D6Q7Z4S9 175 aa11□□□□□ -0.65
SNPH-201ENST00000381867 PRORYQ9H606 182 aa11□□□□□ -0.65
SNPH-201ENST00000381867 ZNF491Q8N8L2 437 aa11□□□□□ -0.65
SNPH-201ENST00000381867 ROS1P08922 2347 aa10.99□□□□□ -0.65
SNPH-201ENST00000381867 CFHR4Q92496 578 aa10.99□□□□□ -0.65
SNPH-201ENST00000381867 EGR2P11161 476 aaPredicted RBP10.99□□□□□ -0.65
SNPH-201ENST00000381867 FOXI2Q6ZQN5 318 aa10.99□□□□□ -0.65
SNPH-201ENST00000381867 ORMDL1Q9P0S3 153 aa10.98□□□□□ -0.65
SNPH-201ENST00000381867 RS1O15537 224 aa10.98□□□□□ -0.65
SNPH-201ENST00000381867 NUPR1O60356 82 aa10.98□□□□□ -0.65
SNPH-201ENST00000381867 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
SNPH-201ENST00000381867 RBAKDNA6NC62 111 aa10.98□□□□□ -0.65
SNPH-201ENST00000381867 ADORA2A-AS1P86434 159 aa10.98□□□□□ -0.65
SNPH-201ENST00000381867 MRPL53Q96EL3 112 aaKnown RBP10.98□□□□□ -0.65
SNPH-201ENST00000381867 IGHV7-4-1A0A0J9YVY3 117 aa10.97□□□□□ -0.65
SNPH-201ENST00000381867 PRSS47A8MTI9 375 aa10.97□□□□□ -0.65
SNPH-201ENST00000381867 DYNAPQ8N1N2 210 aa10.97□□□□□ -0.65
SNPH-201ENST00000381867 C17orf77Q96MU5 243 aa10.97□□□□□ -0.65
SNPH-201ENST00000381867 RNASE8Q8TDE3 154 aaKnown RBP10.97□□□□□ -0.65
SNPH-201ENST00000381867 NBASA2RRP1 2371 aa10.97□□□□□ -0.65
SNPH-201ENST00000381867 APOC4P55056 127 aa10.97□□□□□ -0.65
SNPH-201ENST00000381867 ANKRD39Q53RE8 183 aa10.97□□□□□ -0.65
SNPH-201ENST00000381867 SPTAN1Q13813 2472 aaKnown RBP10.97□□□□□ -0.65
SNPH-201ENST00000381867 CRYGCP07315 174 aa10.97□□□□□ -0.65
SNPH-201ENST00000381867 SMIM20Q8N5G0 67 aa10.96□□□□□ -0.65
SNPH-201ENST00000381867 Q9H8V8 135 aa10.96□□□□□ -0.65
SNPH-201ENST00000381867 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.65
SNPH-201ENST00000381867 USF3Q68DE3 2245 aa10.96□□□□□ -0.65
SNPH-201ENST00000381867 ABCA1O95477 2261 aa10.96□□□□□ -0.65
SNPH-201ENST00000381867 H3BUA1 57 aa10.96□□□□□ -0.66
SNPH-201ENST00000381867 DIAPH2-AS1Q14236 149 aa10.96□□□□□ -0.66
SNPH-201ENST00000381867 DEFB113Q30KQ7 82 aa10.96□□□□□ -0.66
SNPH-201ENST00000381867 CADP27708 2225 aa10.96□□□□□ -0.66
SNPH-201ENST00000381867 HERV-K104P63124 156 aa10.96□□□□□ -0.66
SNPH-201ENST00000381867 TDRG1Q3Y452 100 aa10.95□□□□□ -0.66
SNPH-201ENST00000381867 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
SNPH-201ENST00000381867 PTPRSQ13332 1948 aa10.95□□□□□ -0.66
SNPH-201ENST00000381867 ADAMTS9Q9P2N4 1935 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms