RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 OR10G9Q8NGN4 311 aa9.61□□□□□ -0.87
SHOX-202ENST00000381575 OR10G7Q8NGN6 311 aa9.61□□□□□ -0.87
SHOX-202ENST00000381575 TMED6Q8WW62 240 aa9.61□□□□□ -0.87
SHOX-202ENST00000381575 LY96Q9Y6Y9 160 aa9.61□□□□□ -0.87
SHOX-202ENST00000381575 TRAV21A0A0B4J279 112 aa9.6□□□□□ -0.87
SHOX-202ENST00000381575 M0R2P5 195 aa9.6□□□□□ -0.87
SHOX-202ENST00000381575 ERVFC1-1P60608 527 aa9.6□□□□□ -0.87
SHOX-202ENST00000381575 TDRG1Q3Y452 100 aa9.6□□□□□ -0.87
SHOX-202ENST00000381575 IQCF2Q8IXL9 164 aa9.6□□□□□ -0.87
SHOX-202ENST00000381575 C9JCJ5 164 aa9.59□□□□□ -0.87
SHOX-202ENST00000381575 CDC34P49427 236 aaPredicted RBP9.59□□□□□ -0.87
SHOX-202ENST00000381575 ZNF80P51504 273 aaPredicted RBP9.59□□□□□ -0.87
SHOX-202ENST00000381575 TMEM75Q8N9X5 138 aa9.59□□□□□ -0.87
SHOX-202ENST00000381575 NHLRC2Q8NBF2 726 aa9.59□□□□□ -0.87
SHOX-202ENST00000381575 SDF2L1Q9HCN8 221 aa9.59□□□□□ -0.87
SHOX-202ENST00000381575 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
SHOX-202ENST00000381575 ORM1P02763 201 aa9.58□□□□□ -0.88
SHOX-202ENST00000381575 ASB13Q8WXK3 278 aa9.58□□□□□ -0.88
SHOX-202ENST00000381575 SH3BGRL3Q9H299 93 aa9.58□□□□□ -0.88
SHOX-202ENST00000381575 MSRB1Q9NZV6 116 aa9.58□□□□□ -0.88
SHOX-202ENST00000381575 A0A087WTM6 91 aa9.57□□□□□ -0.88
SHOX-202ENST00000381575 IGHV3-73A0A0B4J1V6 119 aa9.57□□□□□ -0.88
SHOX-202ENST00000381575 EREGO14944 169 aa9.57□□□□□ -0.88
SHOX-202ENST00000381575 EVI2AP22794 236 aa9.57□□□□□ -0.88
SHOX-202ENST00000381575 GCHFRP30047 84 aa9.57□□□□□ -0.88
SHOX-202ENST00000381575 DPPA3Q6W0C5 159 aa9.57□□□□□ -0.88
SHOX-202ENST00000381575 RAB24Q969Q5 203 aa9.57□□□□□ -0.88
SHOX-202ENST00000381575 TXNDC17Q9BRA2 123 aa9.57□□□□□ -0.88
SHOX-202ENST00000381575 VPS13BQ7Z7G8 4022 aa9.56□□□□□ -0.88
SHOX-202ENST00000381575 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
SHOX-202ENST00000381575 CRYGDP07320 174 aa9.56□□□□□ -0.88
SHOX-202ENST00000381575 STAG3L2P0CL84 134 aa9.56□□□□□ -0.88
SHOX-202ENST00000381575 STAG3L3P0CL85 134 aa9.56□□□□□ -0.88
SHOX-202ENST00000381575 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
SHOX-202ENST00000381575 ATP6V0CP27449 155 aa9.56□□□□□ -0.88
SHOX-202ENST00000381575 Q5BKY6 102 aa9.56□□□□□ -0.88
SHOX-202ENST00000381575 NFE4Q86UQ8 179 aa9.56□□□□□ -0.88
SHOX-202ENST00000381575 GGTLC3B5MD39 225 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 GCGP01275 180 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 TCRAP04437 139 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 PPT1P50897 306 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 KRTAP10-1P60331 282 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 ZNF876PQ49A33 203 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 PRNTQ86SH4 94 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 C5orf17Q8NAS9 161 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 KCNS1Q96KK3 526 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 NDFIP1Q9BT67 221 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 PSG8Q9UQ74 426 aa9.55□□□□□ -0.88
SHOX-202ENST00000381575 FLG2Q5D862 2391 aaPredicted RBP9.55□□□□□ -0.88
SHOX-202ENST00000381575 DMBT1Q9UGM3 2413 aaPredicted RBP9.55□□□□□ -0.88
SHOX-202ENST00000381575 FBLL1A6NHQ2 334 aaKnown RBP9.54□□□□□ -0.88
SHOX-202ENST00000381575 IGLV2-11P01706 119 aa9.54□□□□□ -0.88
SHOX-202ENST00000381575 SUMO1P63165 101 aaKnown RBP9.54□□□□□ -0.88
SHOX-202ENST00000381575 ARL6IP6Q8N6S5 226 aa9.54□□□□□ -0.88
SHOX-202ENST00000381575 SLC25A29Q8N8R3 303 aa9.54□□□□□ -0.88
SHOX-202ENST00000381575 OR2G3Q8NGZ4 309 aa9.54□□□□□ -0.88
SHOX-202ENST00000381575 AQP10Q96PS8 301 aa9.54□□□□□ -0.88
SHOX-202ENST00000381575 MED28Q9H204 178 aa9.54□□□□□ -0.88
SHOX-202ENST00000381575 SRRM2Q9UQ35 2752 aaKnown RBP9.54□□□□□ -0.88
SHOX-202ENST00000381575 HERC1Q15751 4861 aa9.53□□□□□ -0.88
SHOX-202ENST00000381575 TRAV34A0A0B4J273 112 aa9.53□□□□□ -0.88
SHOX-202ENST00000381575 XGP55808 180 aa9.53□□□□□ -0.88
SHOX-202ENST00000381575 HAMPP81172 84 aa9.53□□□□□ -0.88
SHOX-202ENST00000381575 CFAP126Q5VTH2 177 aa9.53□□□□□ -0.88
SHOX-202ENST00000381575 PSMG3Q9BT73 122 aaPredicted RBP9.53□□□□□ -0.88
SHOX-202ENST00000381575 PGPEP1LA6NFU8 196 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 RS1O15537 224 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 FLI1Q01543 452 aaPredicted RBP9.52□□□□□ -0.88
SHOX-202ENST00000381575 ZNF506Q5JVG8 444 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 CDPF1Q6NVV7 123 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 SUN5Q8TC36 379 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 LINC00479Q96M42 142 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 C9orf85Q96MD7 179 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 Q9HAA7 133 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 EPDR1Q9UM22 224 aa9.52□□□□□ -0.88
SHOX-202ENST00000381575 IGHV3-38A0A0C4DH36 116 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 SERTM2A0A1B0GWG4 89 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 EPM2AB3EWF7 344 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 K7EQM0 130 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 IGHV3-30P01768 117 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 IGHV3-33P01772 117 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
SHOX-202ENST00000381575 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 IGHV3-30-5P0DP03 117 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 RNASE3P12724 160 aaKnown RBP9.51□□□□□ -0.89
SHOX-202ENST00000381575 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 OR10J3Q5JRS4 329 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 RPL7L1Q6DKI1 246 aaKnown RBP9.51□□□□□ -0.89
SHOX-202ENST00000381575 CYB561D1Q8N8Q1 229 aa9.51□□□□□ -0.89
SHOX-202ENST00000381575 FXYD6-FXYD2A0A087WZ82 144 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 RNF222A6NCQ9 220 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 TAAR5O14804 337 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 CXorf1O96002 111 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 UBE2G2P60604 165 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 ZNF726P1Q15940 193 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 ZFP69Q49AA0 526 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 Q6ZSN1 163 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 Q8N3U1 123 aa9.5□□□□□ -0.89
SHOX-202ENST00000381575 C10orf126Q8N4M7 172 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms