RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 D6R8Y8 96 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 RNF223E7ERA6 249 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 K7EMT4 169 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 OR10J6PQ8NGY7 276 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 PRELID3AQ96N28 172 aa9.62□□□□□ -0.87
VPS16-202ENST00000380445 UBR5O95071 2799 aaPredicted RBP9.61□□□□□ -0.87
VPS16-202ENST00000380445 OR4C46A6NHA9 309 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 PLA2G2AP14555 144 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 PSMB8P28062 276 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 RPL11P62913 178 aaKnown RBP9.61□□□□□ -0.87
VPS16-202ENST00000380445 AP1S3Q96PC3 154 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 MAP1LC3CQ9BXW4 147 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 DEFB113Q30KQ7 82 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 MRPL51Q4U2R6 128 aaKnown RBP9.61□□□□□ -0.87
VPS16-202ENST00000380445 NEGR1Q7Z3B1 354 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 ZNF575Q86XF7 245 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 SIGMAR1Q99720 223 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 RHPN1-AS1Q9BWJ2 59 aa9.61□□□□□ -0.87
VPS16-202ENST00000380445 CKS2P33552 79 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 CKS1BP61024 79 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 SPATA12Q7Z6I5 190 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 GPHB5Q86YW7 130 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 OR10AG1Q8NH19 301 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 SOCS3O14543 225 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 IGHV4-31P0DP07 118 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 LCNL1Q6ZST4 164 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 MAPK1IP1LQ8NDC0 245 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 VPREB3Q9UKI3 123 aa9.6□□□□□ -0.87
VPS16-202ENST00000380445 IGKV3D-20A0A0C4DH25 116 aa9.59□□□□□ -0.87
VPS16-202ENST00000380445 hDV102S1A0JD36 115 aa9.59□□□□□ -0.87
VPS16-202ENST00000380445 C20orf173Q96LM9 149 aa9.59□□□□□ -0.87
VPS16-202ENST00000380445 UFC1Q9Y3C8 167 aa9.59□□□□□ -0.87
VPS16-202ENST00000380445 J3QKU1 62 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 FSHBP01225 129 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 TM4SF20Q53R12 229 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 Q6YL49 198 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 PSMG3-AS1Q96PY0 264 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
VPS16-202ENST00000380445 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
VPS16-202ENST00000380445 TRBV7-9A0A0J9YWB2 115 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 SMIM17P0DL12 118 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 ID1P41134 155 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 SIGLEC8Q9NYZ4 499 aa9.58□□□□□ -0.88
VPS16-202ENST00000380445 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 K7EP34 96 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 CACNG7P62955 275 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 LOC389332A0A1B0GUA5 103 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 KRTAP10-9P60411 292 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 FOXE3Q13461 319 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 MSRB1Q9NZV6 116 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 VPS13CQ709C8 3753 aa9.57□□□□□ -0.88
VPS16-202ENST00000380445 ELANEP08246 267 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 SCRT2Q9NQ03 307 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 TIMM8BQ9Y5J9 83 aaPredicted RBP9.56□□□□□ -0.88
VPS16-202ENST00000380445 C9orf118A6NHY6 69 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 SEC11AP67812 179 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 OR8A1Q8NGG7 326 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 OR2K2Q8NGT1 345 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 RNF185Q96GF1 192 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 MAP1LC3AQ9H492 121 aa9.56□□□□□ -0.88
VPS16-202ENST00000380445 TENM4Q6N022 2769 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 IGHV4-4A0A075B6R2 117 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 H3BUT2 72 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 SNAI2O43623 268 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 RPL24P83731 157 aaKnown RBP9.55□□□□□ -0.88
VPS16-202ENST00000380445 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 LRRK2Q5S007 2527 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 NPYP01303 97 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 SPANXN1Q5VSR9 72 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 ZFAND2AQ8N6M9 145 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 ANKRD17O75179 2603 aaKnown RBP9.55□□□□□ -0.88
VPS16-202ENST00000380445 CELSR1Q9NYQ6 3014 aa9.55□□□□□ -0.88
VPS16-202ENST00000380445 HSD52Q0P140 79 aa9.54□□□□□ -0.88
VPS16-202ENST00000380445 Q96MF0 132 aa9.54□□□□□ -0.88
VPS16-202ENST00000380445 JMJD8Q96S16 334 aa9.54□□□□□ -0.88
VPS16-202ENST00000380445 IGKV3-7A0A075B6H7 116 aa9.54□□□□□ -0.88
VPS16-202ENST00000380445 H3BRM9 83 aa9.54□□□□□ -0.88
VPS16-202ENST00000380445 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
VPS16-202ENST00000380445 ZNF479Q96JC4 524 aa9.54□□□□□ -0.88
VPS16-202ENST00000380445 CRYBG3Q68DQ2 2970 aa9.54□□□□□ -0.88
VPS16-202ENST00000380445 SMKR1H3BMG3 65 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 HBDP02042 147 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 LINC01545Q5VT33 79 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 APRG1Q8IVJ8 170 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 FAM19A4Q96LR4 140 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 NAA38Q9BRA0 125 aaKnown RBP9.53□□□□□ -0.88
VPS16-202ENST00000380445 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
VPS16-202ENST00000380445 FASNP49327 2511 aaKnown RBP9.53□□□□□ -0.88
VPS16-202ENST00000380445 H0Y8G0 127 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 HOXA3O43365 443 aaPredicted RBP9.53□□□□□ -0.88
VPS16-202ENST00000380445 NCR2O95944 276 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 LGALS1P09382 135 aaKnown RBP9.53□□□□□ -0.88
VPS16-202ENST00000380445 PRR9Q5T870 116 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 TEX29Q8N6K0 151 aa9.53□□□□□ -0.88
VPS16-202ENST00000380445 UBE2E2Q96LR5 201 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms