RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 DCANP1Q8TF63 244 aa17.45■□□□□ 0.38
VPS16-201ENST00000380443 RNF185Q96GF1 192 aa17.45■□□□□ 0.38
VPS16-201ENST00000380443 SYS1-DBNDD2H3BUS1 97 aa17.44■□□□□ 0.38
VPS16-201ENST00000380443 C10orf99Q6UWK7 81 aa17.44■□□□□ 0.38
VPS16-201ENST00000380443 SIGLEC8Q9NYZ4 499 aa17.44■□□□□ 0.38
VPS16-201ENST00000380443 MUC21A0A0G2JKD1 596 aa17.44■□□□□ 0.38
VPS16-201ENST00000380443 MUC21A0A140T8X8 626 aa17.44■□□□□ 0.38
VPS16-201ENST00000380443 SSTP61278 116 aa17.44■□□□□ 0.38
VPS16-201ENST00000380443 SPATA45Q537H7 98 aa17.44■□□□□ 0.38
VPS16-201ENST00000380443 MUC21Q5SSG8 566 aa17.44■□□□□ 0.38
VPS16-201ENST00000380443 TCF21O43680 179 aa17.43■□□□□ 0.38
VPS16-201ENST00000380443 TRAV9-2A0A087WT02 112 aa17.42■□□□□ 0.38
VPS16-201ENST00000380443 IFI27P40305 119 aaPredicted RBP17.42■□□□□ 0.38
VPS16-201ENST00000380443 ODF3Q96PU9 254 aa17.42■□□□□ 0.38
VPS16-201ENST00000380443 MSRB1Q9NZV6 116 aa17.42■□□□□ 0.38
VPS16-201ENST00000380443 SVEP1Q4LDE5 3571 aa17.42■□□□□ 0.38
VPS16-201ENST00000380443 PRR9Q5T870 116 aa17.42■□□□□ 0.38
VPS16-201ENST00000380443 MAP1LC3AQ9H492 121 aa17.42■□□□□ 0.38
VPS16-201ENST00000380443 ZNF469Q96JG9 3925 aaPredicted RBP17.42■□□□□ 0.38
VPS16-201ENST00000380443 SPATA12Q7Z6I5 190 aa17.41■□□□□ 0.38
VPS16-201ENST00000380443 C2orf88Q9BSF0 95 aa17.41■□□□□ 0.38
VPS16-201ENST00000380443 LINC01546A6NGU7 62 aa17.4■□□□□ 0.38
VPS16-201ENST00000380443 MS4A6AQ9H2W1 248 aa17.4■□□□□ 0.38
VPS16-201ENST00000380443 HIVEP1P15822 2718 aa17.4■□□□□ 0.38
VPS16-201ENST00000380443 SNRPD3P62318 126 aaKnown RBP17.4■□□□□ 0.38
VPS16-201ENST00000380443 SPANXN1Q5VSR9 72 aa17.4■□□□□ 0.38
VPS16-201ENST00000380443 ZNF705AQ6ZN79 300 aaPredicted RBP17.4■□□□□ 0.38
VPS16-201ENST00000380443 UQCR10Q9UDW1 63 aa17.4■□□□□ 0.38
VPS16-201ENST00000380443 IGKV3-7A0A075B6H7 116 aa17.39■□□□□ 0.37
VPS16-201ENST00000380443 M0R143 59 aa17.39■□□□□ 0.37
VPS16-201ENST00000380443 NXT2Q9NPJ8 142 aaKnown RBP17.39■□□□□ 0.37
VPS16-201ENST00000380443 FLNAP21333 2647 aaKnown RBP17.39■□□□□ 0.37
VPS16-201ENST00000380443 IGHV4OR15-8A0A075B7B6 117 aa17.38■□□□□ 0.37
VPS16-201ENST00000380443 A0A087WW49 117 aa17.38■□□□□ 0.37
VPS16-201ENST00000380443 NPYP01303 97 aa17.38■□□□□ 0.37
VPS16-201ENST00000380443 ASIPP42127 132 aa17.38■□□□□ 0.37
VPS16-201ENST00000380443 ZNF747Q9BV97 191 aa17.38■□□□□ 0.37
VPS16-201ENST00000380443 LOC389332A0A1B0GUA5 103 aa17.37■□□□□ 0.37
VPS16-201ENST00000380443 KLLNB2CW77 178 aa17.37■□□□□ 0.37
VPS16-201ENST00000380443 HOXD3P31249 432 aaPredicted RBP17.37■□□□□ 0.37
VPS16-201ENST00000380443 DEFB125Q8N687 156 aa17.37■□□□□ 0.37
VPS16-201ENST00000380443 PRSS47A8MTI9 375 aa17.37■□□□□ 0.37
VPS16-201ENST00000380443 K7EQG2 157 aa17.37■□□□□ 0.37
VPS16-201ENST00000380443 RNASE4P34096 147 aaKnown RBP17.37■□□□□ 0.37
VPS16-201ENST00000380443 LEPP41159 167 aa17.37■□□□□ 0.37
VPS16-201ENST00000380443 SYNJ2BPP57105 145 aa17.37■□□□□ 0.37
VPS16-201ENST00000380443 OR4C46A6NHA9 309 aa17.36■□□□□ 0.37
VPS16-201ENST00000380443 IGLC3P0DOY3 106 aa17.36■□□□□ 0.37
VPS16-201ENST00000380443 LINC00173Q6ZV60 143 aa17.36■□□□□ 0.37
VPS16-201ENST00000380443 F6UB75 175 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 TNFRSF6BO95407 300 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 HBDP02042 147 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 SRD5A1P18405 259 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 S100A4P26447 101 aaKnown RBP17.35■□□□□ 0.37
VPS16-201ENST00000380443 SMKR1H3BMG3 65 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 H3BVH4 76 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 EDN2P20800 178 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 WFDC12Q8WWY7 111 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 MRAP2Q96G30 205 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 SCRT2Q9NQ03 307 aa17.35■□□□□ 0.37
VPS16-201ENST00000380443 F8P00451 2351 aa17.34■□□□□ 0.37
VPS16-201ENST00000380443 ANXA2RQ3ZCQ2 193 aa17.34■□□□□ 0.37
VPS16-201ENST00000380443 LINC01545Q5VT33 79 aa17.34■□□□□ 0.37
VPS16-201ENST00000380443 WFDC3Q8IUB2 231 aa17.34■□□□□ 0.37
VPS16-201ENST00000380443 NCR2O95944 276 aa17.33■□□□□ 0.37
VPS16-201ENST00000380443 C4orf3Q8WVX3 66 aa17.33■□□□□ 0.37
VPS16-201ENST00000380443 ST20Q9HBF5 79 aa17.33■□□□□ 0.37
VPS16-201ENST00000380443 DUSP14O95147 198 aaKnown RBP17.33■□□□□ 0.36
VPS16-201ENST00000380443 EVI2AP22794 236 aa17.33■□□□□ 0.36
VPS16-201ENST00000380443 DEFB1P60022 68 aa17.33■□□□□ 0.36
VPS16-201ENST00000380443 A0A096LNJ9 63 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 TRAV2A0A0B4J234 112 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 LINC01619G3V211 115 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 J3KRW8 73 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 Q6ZQT7 251 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 ATOH7Q8N100 152 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 OR2K2Q8NGT1 345 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 PEMTQ9UBM1 199 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 PHLDA3Q9Y5J5 127 aa17.32■□□□□ 0.36
VPS16-201ENST00000380443 A0A0J9YX75 114 aa17.31■□□□□ 0.36
VPS16-201ENST00000380443 HSBP1L1C9JCN9 74 aa17.31■□□□□ 0.36
VPS16-201ENST00000380443 TSPOP30536 169 aa17.31■□□□□ 0.36
VPS16-201ENST00000380443 Q8N8P6 123 aa17.31■□□□□ 0.36
VPS16-201ENST00000380443 PSMG4Q5JS54 123 aa17.31■□□□□ 0.36
VPS16-201ENST00000380443 SMR3AQ99954 134 aa17.31■□□□□ 0.36
VPS16-201ENST00000380443 SNHG12Q9BXW3 62 aa17.31■□□□□ 0.36
VPS16-201ENST00000380443 FAM159AQ6UWV7 190 aa17.3■□□□□ 0.36
VPS16-201ENST00000380443 ZNF688P0C7X2 276 aa17.29■□□□□ 0.36
VPS16-201ENST00000380443 IGLL1P15814 213 aa17.29■□□□□ 0.36
VPS16-201ENST00000380443 DPH3P1Q9H4G8 78 aa17.29■□□□□ 0.36
VPS16-201ENST00000380443 ACANP16112 2415 aa17.29■□□□□ 0.36
VPS16-201ENST00000380443 NXPH4O95158 308 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 LY6G6DO95868 133 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 FCER1GP30273 86 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 TCTEX1D4Q5JR98 221 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 FOXI2Q6ZQN5 318 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 DPF1Q92782 380 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 ZFHX3Q15911 3703 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 C7orf71A4D174 169 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 CD5LO43866 347 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms