RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 IGLV2-8P01709 118 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 TRGV3P03979 118 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 SRD5A1P18405 259 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 TPPP2P59282 170 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 PGLYRP4Q96LB8 373 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 NUPR1O60356 82 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 TRBV12-3P01733 135 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 CTSGP08311 255 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 MRPL53Q96EL3 112 aaKnown RBP8.39□□□□□ -1.07
NEDD9-201ENST00000379433 APOHP02749 345 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-201ENST00000379433 TCRAP04437 139 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
NEDD9-201ENST00000379433 NIPBLQ6KC79 2804 aaeCLIP8.38□□□□□ -1.07
NEDD9-201ENST00000379433 HIGD1CA8MV81 97 aa8.38□□□□□ -1.07
NEDD9-201ENST00000379433 MT-ATP8P03928 68 aa8.38□□□□□ -1.07
NEDD9-201ENST00000379433 MALP21145 153 aa8.38□□□□□ -1.07
NEDD9-201ENST00000379433 MPV17L2Q567V2 206 aa8.38□□□□□ -1.07
NEDD9-201ENST00000379433 TTC32Q5I0X7 151 aa8.38□□□□□ -1.07
NEDD9-201ENST00000379433 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
NEDD9-201ENST00000379433 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
NEDD9-201ENST00000379433 KLK15Q9H2R5 256 aa8.38□□□□□ -1.07
NEDD9-201ENST00000379433 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
NEDD9-201ENST00000379433 DEFB1P60022 68 aa8.38□□□□□ -1.07
NEDD9-201ENST00000379433 FAM231BA6NCW3 169 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 C9JCJ5 164 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 NUDT3O95989 172 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 IGHV4-59P01825 116 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 FOXA3P55318 350 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-201ENST00000379433 OR2K2Q8NGT1 345 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 P01737 135 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 TTC9CQ8N5M4 171 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 DEFB125Q8N687 156 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 Q8N6K4 173 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 IGF2BP2-AS1Q96M15 143 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 SHANK2-AS3Q9BTD1 123 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 ZNF331Q9NQX6 463 aaPredicted RBP8.37□□□□□ -1.07
NEDD9-201ENST00000379433 UNC79Q9P2D8 2635 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 PAX8Q06710 450 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 FAM106AQ4KMX7 169 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 C5orf56Q8N8D9 126 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 AAMDCQ9H7C9 122 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 RABAC1Q9UI14 185 aa8.37□□□□□ -1.07
NEDD9-201ENST00000379433 TRAV41A0A0B4J266 112 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 CRISP2P16562 243 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 SAMD10Q9BYL1 202 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 C2CD3Q4AC94 2353 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 B4DSR2 109 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 KRTDAPP60985 99 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 LINC01620Q4KN68 170 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 ARL2-SNX15V9GYD0 113 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 TRBV19A0A075B6N1 114 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 RHODO00212 210 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 SRIP30626 198 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 ERCC8Q13216 396 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 LINC00336Q6ZUF6 198 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 C11orf44Q8N8P7 122 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 TMEM75Q8N9X5 138 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 MOB4Q9Y3A3 225 aa8.36□□□□□ -1.07
NEDD9-201ENST00000379433 OOSP1A8MZH6 123 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 DEFB112Q30KQ8 113 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 LYRM7Q5U5X0 104 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 PVRIGQ6DKI7 326 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 UFSP1Q6NVU6 142 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 FAM19A2Q8N3H0 131 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 K7EP34 96 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 NUP35Q8NFH5 326 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 OR5A1Q8NGJ0 315 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 CCDC140Q96MF4 163 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 PRADC1Q9BSG0 188 aa8.35□□□□□ -1.07
NEDD9-201ENST00000379433 DIRC3C9JPN6 131 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 H3BRN7 92 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 CSN3P07498 182 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
NEDD9-201ENST00000379433 PYGO2Q9BRQ0 406 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 BMPR1BO00238 502 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 CD5LO43866 347 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 ZNF253O75346 499 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 SERF1AO75920 110 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 EVI2AP22794 236 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 CSN1S1P47710 185 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 ZNF414Q96IQ9 312 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 Q96MF0 132 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 VGLL1Q99990 258 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 SPCS1Q9Y6A9 102 aa8.34□□□□□ -1.07
NEDD9-201ENST00000379433 XGP55808 180 aa8.33□□□□□ -1.08
NEDD9-201ENST00000379433 UNQ9165/PRO28630Q6UXU0 137 aa8.33□□□□□ -1.08
NEDD9-201ENST00000379433 TMEM86BQ8N661 226 aa8.33□□□□□ -1.08
NEDD9-201ENST00000379433 OTORQ9NRC9 128 aa8.33□□□□□ -1.08
NEDD9-201ENST00000379433 OSTCQ9NRP0 149 aa8.33□□□□□ -1.08
NEDD9-201ENST00000379433 EBI3Q14213 229 aa8.33□□□□□ -1.08
NEDD9-201ENST00000379433 AGRNO00468 2067 aa8.33□□□□□ -1.08
NEDD9-201ENST00000379433 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 VWC2LB2RUY7 222 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 PRAC2D3DTV9 90 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 SPRY2O43597 315 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 PMCHL1Q16048 86 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 Q86TA4 180 aa8.32□□□□□ -1.08
NEDD9-201ENST00000379433 EEF1AKMT3Q96AZ1 226 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms