RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PRSS3P2Q8NHM4 247 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 ZNF702PQ9H963 129 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 AP5S1Q9NUS5 200 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 HSPB8Q9UJY1 196 aa7.94□□□□□ -1.14
POLR2J3-201ENST00000379340 TRAV21A0A0B4J279 112 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 IGKV3D-20A0A0C4DH25 116 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 LGALS9O00182 355 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 SNAI2O43623 268 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 RPL11P62913 178 aaKnown RBP7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 MRPL51Q4U2R6 128 aaKnown RBP7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 TM4SF20Q53R12 229 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 LCNL1Q6ZST4 164 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 SMIM15Q7Z3B0 74 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 ZNF575Q86XF7 245 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 APRG1Q8IVJ8 170 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 AMN1Q8IY45 258 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 TMEM86BQ8N661 226 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 KLHDC1Q8N7A1 406 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 UBE2E2Q96LR5 201 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 MIEN1Q9BRT3 115 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 IGHV4-4A0A075B6R2 117 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 HOXA3O43365 443 aaPredicted RBP7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 MED14OSP0DP75 135 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 CKS2P33552 79 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 PRR31Q5SQ13 230 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 PET117Q6UWS5 81 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 Q8N2B8 174 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 OR8A1Q8NGG7 326 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 OR10AG1Q8NH19 301 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 FAM19A4Q96LR4 140 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 PAM16Q9Y3D7 125 aa7.93□□□□□ -1.14
POLR2J3-201ENST00000379340 M0QZ24 198 aa7.92□□□□□ -1.14
POLR2J3-201ENST00000379340 CSN3P07498 182 aa7.92□□□□□ -1.14
POLR2J3-201ENST00000379340 SPATA45Q537H7 98 aa7.92□□□□□ -1.14
POLR2J3-201ENST00000379340 ZFAND2AQ8N6M9 145 aa7.92□□□□□ -1.14
POLR2J3-201ENST00000379340 TMEM158Q8WZ71 300 aa7.92□□□□□ -1.14
POLR2J3-201ENST00000379340 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
POLR2J3-201ENST00000379340 C11orf21Q9P2W6 132 aa7.92□□□□□ -1.14
POLR2J3-201ENST00000379340 ANK2Q01484 3957 aa7.91□□□□□ -1.14
POLR2J3-201ENST00000379340 SYS1-DBNDD2H3BUS1 97 aa7.91□□□□□ -1.14
POLR2J3-201ENST00000379340 RPLP1P05386 114 aaKnown RBP7.91□□□□□ -1.14
POLR2J3-201ENST00000379340 KRTAP24-1Q3LI83 254 aa7.91□□□□□ -1.14
POLR2J3-201ENST00000379340 RNF185Q96GF1 192 aa7.91□□□□□ -1.14
POLR2J3-201ENST00000379340 C2orf88Q9BSF0 95 aa7.91□□□□□ -1.14
POLR2J3-201ENST00000379340 SIGLEC8Q9NYZ4 499 aa7.91□□□□□ -1.14
POLR2J3-201ENST00000379340 TRAV9-2A0A087WT02 112 aa7.9□□□□□ -1.14
POLR2J3-201ENST00000379340 TCF21O43680 179 aa7.9□□□□□ -1.14
POLR2J3-201ENST00000379340 TDRG1Q3Y452 100 aa7.9□□□□□ -1.14
POLR2J3-201ENST00000379340 DCANP1Q8TF63 244 aa7.9□□□□□ -1.14
POLR2J3-201ENST00000379340 ODF3Q96PU9 254 aa7.9□□□□□ -1.14
POLR2J3-201ENST00000379340 MAP1LC3AQ9H492 121 aa7.9□□□□□ -1.14
POLR2J3-201ENST00000379340 UQCR10Q9UDW1 63 aa7.9□□□□□ -1.14
POLR2J3-201ENST00000379340 MUC21A0A0G2JKD1 596 aa7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 MUC21A0A140T8X8 626 aa7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 LINC01546A6NGU7 62 aa7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 M0R143 59 aa7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 IFI27P40305 119 aaPredicted RBP7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 MUC21Q5SSG8 566 aa7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 PRR9Q5T870 116 aa7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 C10orf99Q6UWK7 81 aa7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 ZNF705AQ6ZN79 300 aaPredicted RBP7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 SPATA12Q7Z6I5 190 aa7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
POLR2J3-201ENST00000379340 OR4C46A6NHA9 309 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 NPYP01303 97 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 ASIPP42127 132 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 SNRPD3P62318 126 aaKnown RBP7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 SPANXN1Q5VSR9 72 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 MSRB1Q9NZV6 116 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 ZMAT5Q9UDW3 170 aaKnown RBP7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 IGHV4OR15-8A0A075B7B6 117 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 A0A087WW49 117 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 PRSS47A8MTI9 375 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 KLLNB2CW77 178 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 HBDP02042 147 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 IGLC3P0DOY3 106 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 LEPP41159 167 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 SSTP61278 116 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 DEFB125Q8N687 156 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 ZNF747Q9BV97 191 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 MS4A6AQ9H2W1 248 aa7.88□□□□□ -1.15
POLR2J3-201ENST00000379340 IGKV3-7A0A075B6H7 116 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 LOC389332A0A1B0GUA5 103 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 H3BVH4 76 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 K7EQG2 157 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 TNFRSF6BO95407 300 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 HOXD3P31249 432 aaPredicted RBP7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 WFDC12Q8WWY7 111 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 MRAP2Q96G30 205 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 ST20Q9HBF5 79 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 YAE1D1Q9NRH1 226 aa7.87□□□□□ -1.15
POLR2J3-201ENST00000379340 HSBP1L1C9JCN9 74 aa7.86□□□□□ -1.15
POLR2J3-201ENST00000379340 SMKR1H3BMG3 65 aa7.86□□□□□ -1.15
POLR2J3-201ENST00000379340 DUSP14O95147 198 aaKnown RBP7.86□□□□□ -1.15
POLR2J3-201ENST00000379340 NCR2O95944 276 aa7.86□□□□□ -1.15
POLR2J3-201ENST00000379340 S100A4P26447 101 aaKnown RBP7.86□□□□□ -1.15
POLR2J3-201ENST00000379340 RNASE4P34096 147 aaKnown RBP7.86□□□□□ -1.15
POLR2J3-201ENST00000379340 SYNJ2BPP57105 145 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms