RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 PDPNQ86YL7 162 aa5.59□□□□□ -1.51
GPCPD1-201ENST00000379019 OR10AG1Q8NH19 301 aa5.59□□□□□ -1.51
GPCPD1-201ENST00000379019 CFHR4Q92496 578 aa5.59□□□□□ -1.51
GPCPD1-201ENST00000379019 SIGLEC9Q9Y336 463 aa5.59□□□□□ -1.51
GPCPD1-201ENST00000379019 HIST1H1AQ02539 215 aaPredicted RBP5.59□□□□□ -1.52
GPCPD1-201ENST00000379019 C9orf47Q6ZRZ4 202 aa5.59□□□□□ -1.52
GPCPD1-201ENST00000379019 ZMAT4Q9H898 229 aa5.59□□□□□ -1.52
GPCPD1-201ENST00000379019 U3KQK5 164 aa5.59□□□□□ -1.52
GPCPD1-201ENST00000379019 TMEM89A2RUT3 159 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 GAGE10A6NGK3 116 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 SH2D1AO60880 128 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 RNASE1P07998 156 aaKnown RBP5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 MINOS1Q5TGZ0 78 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 TNFRSF14Q92956 283 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 JPT2Q9H910 190 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 MINOS1-NBL1R4GNA1 71 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 C8orf31Q8N9H6 132 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 AJUBAQ96IF1 538 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 CR1P17927 2039 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 TSHBP01222 138 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 APOA2P02652 100 aa5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
GPCPD1-201ENST00000379019 NOTCH1P46531 2555 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 SERTM2A0A1B0GWG4 89 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 MT-ATP8P03928 68 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 SIRPDQ9H106 197 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 NHP2Q9NX24 153 aaKnown RBP5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 PSG8Q9UQ74 426 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 IGHV7-4-1A0A0J9YVY3 117 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 CRYGDP07320 174 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 PRTN3P24158 256 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 UBE2E1P51965 193 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 IL17RELQ6ZVW7 336 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 C14orf178Q8N769 122 aaPredicted RBP5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 KLHDC1Q8N7A1 406 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 XGP55808 180 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 NRACQ8N912 160 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 OR1L4Q8NGR5 311 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 TRAV26-1A0A087WT03 109 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 IGHV1-8P0DP01 117 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 FAM104BQ5XKR9 115 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 RPL39LQ96EH5 51 aaKnown RBP5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 LINC00527Q9UJ94 153 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 LINC00312Q9Y6C7 94 aa5.57□□□□□ -1.52
GPCPD1-201ENST00000379019 IGHV1-69DA0A0B4J2H0 117 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 A0A1B0GUT8 65 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 IGHV1-69P01742 117 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 GCSHP23434 173 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 CITED2Q99967 270 aaPredicted RBP5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 IL4P05112 153 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 NHLRC4P0CG21 123 aaPredicted RBP5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 CHCHD1Q96BP2 118 aaKnown RBP5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 KLK15Q9H2R5 256 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 SPCS1Q9Y6A9 102 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 IGLC6P0CF74 106 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 COX7A1P24310 79 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 ZNF493Q6ZR52 646 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 GPHB5Q86YW7 130 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 OPRPNQ99935 248 aaPredicted RBP5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 J3KRW8 73 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 LINC01559Q495D7 138 aa5.56□□□□□ -1.52
GPCPD1-201ENST00000379019 IGHV1-3A0A0C4DH29 117 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 RASL11AQ6T310 242 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 ATP5L2Q7Z4Y8 100 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 FAM104AQ969W3 186 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 C20orf173Q96LM9 149 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 C16orf95Q9H693 158 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 TEP1Q99973 2627 aaKnown RBP5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 TRBV12-3P01733 135 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 GATD1Q8NB37 220 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 OR4C13Q8NGP0 309 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 MAP1LC3CQ9BXW4 147 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 F6UB75 175 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 Q6YL49 198 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 TRAV8-2A0A0B4J237 113 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 LY6LH3BQJ8 138 aa5.55□□□□□ -1.52
GPCPD1-201ENST00000379019 H3BRM9 83 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 SCGB2A1O75556 95 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 OR5AL1P0C617 328 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 SRSF9Q13242 221 aaKnown RBP eCLIP5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 TIMM23O14925 209 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 PPP1R27Q86WC6 154 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 OR11H6Q8NGC7 330 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 CACNG8Q8WXS5 425 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 IFI27L1Q96BM0 104 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 MRPL32Q9BYC8 188 aaKnown RBP5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 DNAH10Q8IVF4 4471 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 HLA-DRB4P13762 266 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 RPL24P83731 157 aaKnown RBP5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 SAMD5Q5TGI4 173 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 RASL10AQ92737 203 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 PRELID3AQ96N28 172 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 PRR25Q96S07 402 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 SIGMAR1Q99720 223 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 HLA-DRB4X5D2U9 266 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 FLNAP21333 2647 aaKnown RBP5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 TRBV7-3A0A075B6L6 115 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 IGLL5B9A064 214 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 H3BRN7 92 aa5.54□□□□□ -1.52
GPCPD1-201ENST00000379019 CTSGP08311 255 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms