RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TFF1P04155 84 aa9.27□□□□□ -0.93
NPHP4-202ENST00000378161 FAM216BQ8N7L0 139 aa9.27□□□□□ -0.93
NPHP4-202ENST00000378161 PLEKHB2Q96CS7 222 aa9.27□□□□□ -0.93
NPHP4-202ENST00000378161 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
NPHP4-202ENST00000378161 PPP1R17O96001 155 aa9.27□□□□□ -0.93
NPHP4-202ENST00000378161 ODF3Q96PU9 254 aa9.27□□□□□ -0.93
NPHP4-202ENST00000378161 SAA1P0DJI8 122 aaPredicted RBP9.26□□□□□ -0.93
NPHP4-202ENST00000378161 CRYGAP11844 174 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 TRAV12-2A0A075B6T6 113 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 LINC00205P59089 165 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 RPL18AQ02543 176 aaKnown RBP9.26□□□□□ -0.93
NPHP4-202ENST00000378161 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 SLC25A15Q9Y619 301 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 C9orf106Q8NAJ2 232 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 KIF26AQ9ULI4 1882 aaPredicted RBP9.26□□□□□ -0.93
NPHP4-202ENST00000378161 SH2D1AO60880 128 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 GATA4P43694 442 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 PRSS22Q9GZN4 317 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 LAMA3Q16787 3333 aa9.26□□□□□ -0.93
NPHP4-202ENST00000378161 RHOHQ15669 191 aa9.25□□□□□ -0.93
NPHP4-202ENST00000378161 FXYD5Q96DB9 178 aa9.25□□□□□ -0.93
NPHP4-202ENST00000378161 SPRR3Q9UBC9 169 aa9.25□□□□□ -0.93
NPHP4-202ENST00000378161 ABCA1O95477 2261 aa9.25□□□□□ -0.93
NPHP4-202ENST00000378161 CXCL5P42830 114 aa9.25□□□□□ -0.93
NPHP4-202ENST00000378161 MLANAQ16655 118 aa9.25□□□□□ -0.93
NPHP4-202ENST00000378161 PKDREJQ9NTG1 2253 aa9.25□□□□□ -0.93
NPHP4-202ENST00000378161 C20orf197Q8N268 126 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 DOCK10Q96BY6 2186 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 EXPH5Q8NEV8 1989 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 MUC6Q6W4X9 2439 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 RANBP2P49792 3224 aaKnown RBP9.24□□□□□ -0.93
NPHP4-202ENST00000378161 KIAA1549LQ6ZVL6 1849 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 IGHV3-64A0A075B6Q5 118 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 C19orf71A6NCJ1 209 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 P0DMU3 169 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 CADP27708 2225 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 INS-IGF2F8WCM5 200 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 PIP4P1Q86T03 277 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 SERP1Q9Y6X1 66 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 EEF1AKMT3Q96AZ1 226 aa9.24□□□□□ -0.93
NPHP4-202ENST00000378161 RPUSD1Q9UJJ7 312 aaKnown RBP9.23□□□□□ -0.93
NPHP4-202ENST00000378161 HHLA3Q9XRX5 114 aa9.23□□□□□ -0.93
NPHP4-202ENST00000378161 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
NPHP4-202ENST00000378161 CD177Q8N6Q3 437 aa9.23□□□□□ -0.93
NPHP4-202ENST00000378161 DOPEY2Q9Y3R5 2298 aa9.22□□□□□ -0.93
NPHP4-202ENST00000378161 IGHV1-18A0A0C4DH31 117 aa9.22□□□□□ -0.93
NPHP4-202ENST00000378161 NSUN5P1Q3KNT7 163 aa9.22□□□□□ -0.93
NPHP4-202ENST00000378161 C2orf66Q6UXQ4 117 aa9.22□□□□□ -0.93
NPHP4-202ENST00000378161 UBE2D1P51668 147 aa9.22□□□□□ -0.93
NPHP4-202ENST00000378161 TRBV19A0A075B6N1 114 aa9.22□□□□□ -0.93
NPHP4-202ENST00000378161 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
NPHP4-202ENST00000378161 TRAV12-1A0A0B4J245 112 aa9.21□□□□□ -0.93
NPHP4-202ENST00000378161 CCL21O00585 134 aa9.21□□□□□ -0.93
NPHP4-202ENST00000378161 MYCNOSP40205 109 aa9.21□□□□□ -0.93
NPHP4-202ENST00000378161 C9orf85Q96MD7 179 aa9.21□□□□□ -0.93
NPHP4-202ENST00000378161 C5orf42Q9H799 3197 aa9.21□□□□□ -0.93
NPHP4-202ENST00000378161 HTTP42858 3142 aa9.21□□□□□ -0.93
NPHP4-202ENST00000378161 PMAIP1Q13794 54 aa9.21□□□□□ -0.93
NPHP4-202ENST00000378161 GHRHP01286 108 aa9.21□□□□□ -0.94
NPHP4-202ENST00000378161 PRB4P10163 310 aaPredicted RBP9.21□□□□□ -0.94
NPHP4-202ENST00000378161 LINC00322Q6ZN03 302 aaPredicted RBP9.21□□□□□ -0.94
NPHP4-202ENST00000378161 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.94
NPHP4-202ENST00000378161 KMT2EQ8IZD2 1858 aa9.21□□□□□ -0.94
NPHP4-202ENST00000378161 CCL3L1P16619 93 aa9.21□□□□□ -0.94
NPHP4-202ENST00000378161 DAD1P61803 113 aa9.21□□□□□ -0.94
NPHP4-202ENST00000378161 FAM27E3Q08E93 113 aa9.21□□□□□ -0.94
NPHP4-202ENST00000378161 SPRNQ5BIV9 151 aa9.21□□□□□ -0.94
NPHP4-202ENST00000378161 FAM167A-AS1Q96KT0 104 aa9.21□□□□□ -0.94
NPHP4-202ENST00000378161 PCNX2A6NKB5 2137 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 K7EM74 188 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 DKK1O94907 266 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 IGHV3-33P01772 117 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 BAALC-AS2P0C853 105 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 FAM53AQ6NSI3 398 aaPredicted RBP9.2□□□□□ -0.94
NPHP4-202ENST00000378161 TMEM75Q8N9X5 138 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 MDS2Q8NDY4 140 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 SHANK2-AS3Q9BTD1 123 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 LY6G6EA0A0G2JKS1 128 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 U3KQA8 63 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 C17orf100A8MU93 164 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 M0R381 172 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
NPHP4-202ENST00000378161 MUSTN1Q8IVN3 82 aa9.2□□□□□ -0.94
NPHP4-202ENST00000378161 SOCS3O14543 225 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 CRIP2P52943 208 aaPredicted RBP9.19□□□□□ -0.94
NPHP4-202ENST00000378161 SLC25A29Q8N8R3 303 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 CEMP1Q6PRD7 247 aaPredicted RBP9.19□□□□□ -0.94
NPHP4-202ENST00000378161 SDIM1Q6ZPB5 146 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 MPLKIPQ8TAP9 179 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 NUP210LQ5VU65 1888 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 TIMM17BO60830 172 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 Q6ZPA2 131 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 ABCA4P78363 2273 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 NCKAP5O14513 1909 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 CRYGDP07320 174 aa9.19□□□□□ -0.94
NPHP4-202ENST00000378161 CLEC2BQ92478 149 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms