RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DGAT2L7PQ6IED9 249 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 RNF5Q99942 180 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 PRDM13Q9H4Q3 707 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 LINC00574Q9H8X3 128 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 NDUFS8O00217 210 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 ZNF324O75467 553 aaPredicted RBP6.22□□□□□ -1.41
CKAP2-203ENST00000378037 LEPP41159 167 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 MRGPRG-AS1Q2M3A8 158 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 Q6ZWC4 215 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 ZNF664Q8N3J9 261 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 C18orf32Q8TCD1 76 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 FOXC2Q99958 501 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 CITED2Q99967 270 aaPredicted RBP6.22□□□□□ -1.41
CKAP2-203ENST00000378037 VPREB3Q9UKI3 123 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 GOLT1BQ9Y3E0 138 aa6.22□□□□□ -1.41
CKAP2-203ENST00000378037 TRBV7-1A0A0A6YYK4 115 aa6.21□□□□□ -1.41
CKAP2-203ENST00000378037 OOSP1A8MZH6 123 aa6.21□□□□□ -1.41
CKAP2-203ENST00000378037 ASIPP42127 132 aa6.21□□□□□ -1.41
CKAP2-203ENST00000378037 MRPL27Q9P0M9 148 aaKnown RBP6.21□□□□□ -1.41
CKAP2-203ENST00000378037 LINC00614P0C842 121 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 IGHV4-31P0DP07 118 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 VAMP3Q15836 100 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 NPBQ8NG41 125 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 VWFP04275 2813 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 VWC2LB2RUY7 222 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 IGLV2-8P01709 118 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 CRYGBP07316 175 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 YPEL3P61236 119 aaPredicted RBP6.21□□□□□ -1.42
CKAP2-203ENST00000378037 LOXL1Q08397 574 aaPredicted RBP6.21□□□□□ -1.42
CKAP2-203ENST00000378037 ORMDL3Q8N138 153 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 TENM1Q9UKZ4 2725 aa6.21□□□□□ -1.42
CKAP2-203ENST00000378037 PRB2P02812 416 aaPredicted RBP6.2□□□□□ -1.42
CKAP2-203ENST00000378037 MT-ND6P03923 174 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 ZC2HC1BQ5TFG8 222 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 TP53TG3Q9ULZ0 132 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 M0QZK8 103 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 NPYP01303 97 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 STHQ8IWL8 128 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 OR1N2Q8NGR9 330 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 TRGV2A0A075B6R0 118 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 TRGV1A0A0A0MS02 117 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 NPC2P61916 151 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 ZNF876PQ49A33 203 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 C20orf173Q96LM9 149 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 ZNF48Q96MX3 618 aaPredicted RBP6.2□□□□□ -1.42
CKAP2-203ENST00000378037 ZFP30Q9Y2G7 519 aa6.2□□□□□ -1.42
CKAP2-203ENST00000378037 CD28P10747 220 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 SCGB1D4Q6XE38 83 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 MS4A6AQ9H2W1 248 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 MAP1LC3AQ9H492 121 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 SMAD5-AS1Q9Y6J3 95 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 CIDEAO60543 219 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 CRYGCP07315 174 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 CRIP1P50238 77 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 DLX4Q92988 240 aaPredicted RBP6.19□□□□□ -1.42
CKAP2-203ENST00000378037 RPL39LQ96EH5 51 aaKnown RBP6.19□□□□□ -1.42
CKAP2-203ENST00000378037 RNF114Q9Y508 228 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 TMEM170BQ5T4T1 132 aa6.19□□□□□ -1.42
CKAP2-203ENST00000378037 DNAJC9-AS1A6NH13 148 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 IGLC2P0DOY2 106 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 GTSCR1Q86UQ5 136 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 IGF2BP2-AS1Q96M15 143 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 SLC50A1Q9BRV3 221 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 TMEM70Q9BUB7 260 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 C11orf68Q9H3H3 251 aaKnown RBP6.18□□□□□ -1.42
CKAP2-203ENST00000378037 TMEM242Q9NWH2 141 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 GCSHP23434 173 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 MRAPQ8TCY5 172 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 C11orf52Q96A22 123 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 RAX2Q96IS3 184 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 GNB1LQ9BYB4 327 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 MRPL16Q9NX20 251 aaKnown RBP6.18□□□□□ -1.42
CKAP2-203ENST00000378037 F8W735 103 aaPredicted RBP6.18□□□□□ -1.42
CKAP2-203ENST00000378037 P0DMU3 169 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 RRN3P1Q2M238 152 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
CKAP2-203ENST00000378037 A0A087X0K7 114 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 IGHV7-4-1A0A0J9YVY3 117 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 PRSS2P07478 247 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 PKIAP61925 76 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 CD300EQ496F6 205 aaPredicted RBP6.17□□□□□ -1.42
CKAP2-203ENST00000378037 MRPL51Q4U2R6 128 aaKnown RBP6.17□□□□□ -1.42
CKAP2-203ENST00000378037 C8orf31Q8N9H6 132 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 MYOZ3Q8TDC0 251 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 TMEM158Q8WZ71 300 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 CLUHP3Q96NS8 147 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 MDFICQ9P1T7 246 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 TRAV21A0A0B4J279 112 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 LTAP01374 205 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 DSCR9P59020 149 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 SMPXQ9UHP9 88 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 A6NDX4 124 aa6.17□□□□□ -1.42
CKAP2-203ENST00000378037 TCF21O43680 179 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms