RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 NAGKQ9UJ70 344 aa9.42□□□□□ -0.9
CKAP2-202ENST00000378034 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 DEFB131BA0A096LNP1 70 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 DEFB130BP0DP73 79 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 DEFB130AP0DP74 79 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 RPL35P42766 123 aaKnown RBP9.41□□□□□ -0.9
CKAP2-202ENST00000378034 TCTAP57738 103 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 LGALS9BQ3B8N2 356 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 BAGE2Q86Y30 109 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 ZC2HC1AQ96GY0 325 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 SPXQ9BT56 116 aa9.41□□□□□ -0.9
CKAP2-202ENST00000378034 LINC00862A6NCI5 91 aa9.4□□□□□ -0.9
CKAP2-202ENST00000378034 SPINK4O60575 86 aa9.4□□□□□ -0.9
CKAP2-202ENST00000378034 NDUFS6O75380 124 aaKnown RBP9.4□□□□□ -0.9
CKAP2-202ENST00000378034 ZNF506Q5JVG8 444 aa9.4□□□□□ -0.9
CKAP2-202ENST00000378034 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
CKAP2-202ENST00000378034 MLST8Q9BVC4 326 aa9.4□□□□□ -0.9
CKAP2-202ENST00000378034 TYMSP04818 313 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 ZNF674Q2M3X9 581 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 SMIM12Q96EX1 92 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 FAM210BQ96KR6 192 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 C18orf15Q96N68 181 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 IGHV3-16A0A0C4DH30 117 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 GNRH2O43555 120 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 ATP5G1P05496 136 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 CLLU1Q5K131 121 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 MDFICQ9P1T7 246 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 C11orf21Q9P2W6 132 aa9.39□□□□□ -0.91
CKAP2-202ENST00000378034 TMEM250H0YL14 139 aa9.38□□□□□ -0.91
CKAP2-202ENST00000378034 CRIP1P50238 77 aa9.38□□□□□ -0.91
CKAP2-202ENST00000378034 DERL1Q9BUN8 251 aa9.38□□□□□ -0.91
CKAP2-202ENST00000378034 TRGV1A0A0A0MS02 117 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 GAGE12BA1L429 117 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 SH2D1AO60880 128 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 GAGE7O76087 117 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 GAGE12FP0CL80 117 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 GAGE12GP0CL81 117 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 GAGE12IP0CL82 117 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 Q6ZTI0 123 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 ORM1P02763 201 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 GNG4P50150 75 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 CENPWQ5EE01 88 aa9.37□□□□□ -0.91
CKAP2-202ENST00000378034 EIF5A2Q9GZV4 153 aaKnown RBP9.37□□□□□ -0.91
CKAP2-202ENST00000378034 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
CKAP2-202ENST00000378034 IGLL5B9A064 214 aa9.36□□□□□ -0.91
CKAP2-202ENST00000378034 TOR2AQ5JU69 321 aa9.36□□□□□ -0.91
CKAP2-202ENST00000378034 NHLRC2Q8NBF2 726 aa9.36□□□□□ -0.91
CKAP2-202ENST00000378034 RASL10AQ92737 203 aa9.36□□□□□ -0.91
CKAP2-202ENST00000378034 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
CKAP2-202ENST00000378034 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 TRGV2A0A075B6R0 118 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 B4DEV8 164 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 KRBOX1C9JBD0 128 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 M0R2P5 195 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 HTN3P15516 51 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 LINC01559Q495D7 138 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 DNLZQ5SXM8 178 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 BIN3Q9NQY0 253 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 IGHV4-4A0A075B6R2 117 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 RAB19A4D1S5 217 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 RAB14P61106 215 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 PTH2Q96A98 100 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 C9orf85Q96MD7 179 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 NDUFAF3Q9BU61 184 aa9.35□□□□□ -0.91
CKAP2-202ENST00000378034 MRPL16Q9NX20 251 aaKnown RBP9.35□□□□□ -0.91
CKAP2-202ENST00000378034 C9JCJ5 164 aa9.34□□□□□ -0.91
CKAP2-202ENST00000378034 ASIPP42127 132 aa9.34□□□□□ -0.91
CKAP2-202ENST00000378034 F5H768 121 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 IGLV2-8P01709 118 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 S100A4P26447 101 aaKnown RBP9.33□□□□□ -0.92
CKAP2-202ENST00000378034 PARLQ9H300 379 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 APLNQ9ULZ1 77 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 TRBV20OR9-2A0A075B6H5 130 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 M0R036 132 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 CXCL1P09341 107 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 RNASE3P12724 160 aaKnown RBP9.33□□□□□ -0.92
CKAP2-202ENST00000378034 PCNPQ8WW12 178 aaKnown RBP9.33□□□□□ -0.92
CKAP2-202ENST00000378034 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
CKAP2-202ENST00000378034 MGST1P10620 155 aaKnown RBP9.32□□□□□ -0.92
CKAP2-202ENST00000378034 PIK3CD-AS1Q5SR53 167 aa9.32□□□□□ -0.92
CKAP2-202ENST00000378034 PRR27Q6MZM9 219 aa9.32□□□□□ -0.92
CKAP2-202ENST00000378034 COMMD7Q86VX2 200 aa9.32□□□□□ -0.92
CKAP2-202ENST00000378034 DAZAP1Q96EP5 407 aaKnown RBP9.32□□□□□ -0.92
CKAP2-202ENST00000378034 LCE6AA0A183 80 aa9.32□□□□□ -0.92
CKAP2-202ENST00000378034 OR5I1Q13606 314 aa9.32□□□□□ -0.92
CKAP2-202ENST00000378034 PEA15Q15121 130 aa9.32□□□□□ -0.92
CKAP2-202ENST00000378034 TMEM88Q6PEY1 159 aa9.32□□□□□ -0.92
CKAP2-202ENST00000378034 C15orf53Q8NAA6 179 aa9.32□□□□□ -0.92
CKAP2-202ENST00000378034 SRP19P09132 144 aaKnown RBP9.31□□□□□ -0.92
CKAP2-202ENST00000378034 SLAQ13239 276 aa9.31□□□□□ -0.92
CKAP2-202ENST00000378034 ZNF876PQ49A33 203 aa9.31□□□□□ -0.92
CKAP2-202ENST00000378034 LY96Q9Y6Y9 160 aa9.31□□□□□ -0.92
CKAP2-202ENST00000378034 TRAV4A0A0B4J268 109 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 C19orf71A6NCJ1 209 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 H3BNG1 76 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 CIDEAO60543 219 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 MED14OSP0DP75 135 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms