RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 C16orf54Q6UWD8 224 aa15.36■□□□□ 0.05
PCDH8-202ENST00000377942 SMIM2Q9BVW6 85 aa15.36■□□□□ 0.05
PCDH8-202ENST00000377942 DEFB136Q30KP8 78 aa15.36■□□□□ 0.05
PCDH8-202ENST00000377942 HLA-DMBP28068 263 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 LURAP1LQ8IV03 231 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 CST9LQ9H4G1 147 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 EML6Q6ZMW3 1958 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 PYY3Q5JQD4 70 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 LMO4P61968 165 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 BUB3O43684 328 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 PCP4P48539 62 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 SLURP1P55000 103 aa15.35■□□□□ 0.05
PCDH8-202ENST00000377942 ATXN8Q156A1 80 aa15.34■□□□□ 0.05
PCDH8-202ENST00000377942 CHAC1Q9BUX1 264 aa15.34■□□□□ 0.05
PCDH8-202ENST00000377942 PGPEP1Q9NXJ5 209 aa15.34■□□□□ 0.05
PCDH8-202ENST00000377942 F6UB75 175 aa15.34■□□□□ 0.05
PCDH8-202ENST00000377942 CGB3P0DN86 165 aa15.34■□□□□ 0.05
PCDH8-202ENST00000377942 CGB7P0DN87 165 aa15.34■□□□□ 0.05
PCDH8-202ENST00000377942 SFTA2Q6UW10 78 aa15.34■□□□□ 0.05
PCDH8-202ENST00000377942 TNFRSF13BO14836 293 aaPredicted RBP15.33■□□□□ 0.05
PCDH8-202ENST00000377942 LEPROTO15243 131 aa15.33■□□□□ 0.04
PCDH8-202ENST00000377942 IGLV2-14P01704 120 aa15.33■□□□□ 0.04
PCDH8-202ENST00000377942 SAMD5Q5TGI4 173 aa15.33■□□□□ 0.04
PCDH8-202ENST00000377942 GPHB5Q86YW7 130 aa15.33■□□□□ 0.04
PCDH8-202ENST00000377942 ZMAT4Q9H898 229 aa15.33■□□□□ 0.04
PCDH8-202ENST00000377942 HIVEP2P31629 2446 aa15.33■□□□□ 0.04
PCDH8-202ENST00000377942 ESDP10768 282 aa15.33■□□□□ 0.04
PCDH8-202ENST00000377942 PATE2Q6UY27 113 aa15.32■□□□□ 0.04
PCDH8-202ENST00000377942 NEGR1Q7Z3B1 354 aa15.32■□□□□ 0.04
PCDH8-202ENST00000377942 WI2-2373I1.2A0A1W2PRP0 233 aa15.32■□□□□ 0.04
PCDH8-202ENST00000377942 RHOHQ15669 191 aa15.32■□□□□ 0.04
PCDH8-202ENST00000377942 TSPAN13O95857 204 aa15.32■□□□□ 0.04
PCDH8-202ENST00000377942 ZNF48Q96MX3 618 aaPredicted RBP15.32■□□□□ 0.04
PCDH8-202ENST00000377942 A6NDX4 124 aa15.31■□□□□ 0.04
PCDH8-202ENST00000377942 MYCNOSP40205 109 aa15.31■□□□□ 0.04
PCDH8-202ENST00000377942 ZNF493Q6ZR52 646 aa15.31■□□□□ 0.04
PCDH8-202ENST00000377942 TRAV25A0A0B4J276 109 aa15.31■□□□□ 0.04
PCDH8-202ENST00000377942 EGR2P11161 476 aaPredicted RBP15.31■□□□□ 0.04
PCDH8-202ENST00000377942 MRPL52Q86TS9 123 aaKnown RBP15.3■□□□□ 0.04
PCDH8-202ENST00000377942 C19orf84I3L1E1 186 aa15.3■□□□□ 0.04
PCDH8-202ENST00000377942 SIGLEC8Q9NYZ4 499 aa15.3■□□□□ 0.04
PCDH8-202ENST00000377942 K7EMI3 77 aa15.3■□□□□ 0.04
PCDH8-202ENST00000377942 WIPF2Q8TF74 440 aaPredicted RBP15.3■□□□□ 0.04
PCDH8-202ENST00000377942 NPYP01303 97 aa15.3■□□□□ 0.04
PCDH8-202ENST00000377942 RMI2Q96E14 147 aa15.3■□□□□ 0.04
PCDH8-202ENST00000377942 OVOL2Q9BRP0 275 aa15.3■□□□□ 0.04
PCDH8-202ENST00000377942 K7EN84 100 aa15.29■□□□□ 0.04
PCDH8-202ENST00000377942 TRAV26-2A0A0B4J265 109 aa15.29■□□□□ 0.04
PCDH8-202ENST00000377942 HLA-DRB4P13762 266 aa15.29■□□□□ 0.04
PCDH8-202ENST00000377942 HLA-DRB4X5D2U9 266 aa15.29■□□□□ 0.04
PCDH8-202ENST00000377942 ODF3BA8MYP8 253 aa15.29■□□□□ 0.04
PCDH8-202ENST00000377942 ZNF561-AS1K7EIQ3 104 aa15.29■□□□□ 0.04
PCDH8-202ENST00000377942 CLPSL1A2RUU4 121 aa15.28■□□□□ 0.04
PCDH8-202ENST00000377942 ZNF124Q15973 351 aa15.28■□□□□ 0.04
PCDH8-202ENST00000377942 IGHV4OR15-8A0A075B7B6 117 aa15.28■□□□□ 0.04
PCDH8-202ENST00000377942 A0A087WW49 117 aa15.28■□□□□ 0.04
PCDH8-202ENST00000377942 TEX48A0A1B0GUV7 120 aa15.28■□□□□ 0.04
PCDH8-202ENST00000377942 NPC2P61916 151 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 LGALS9BQ3B8N2 356 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 LGALS9CQ6DKI2 356 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 MTURNQ8N3F0 131 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 CFHR4Q92496 578 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 U3KQE9 123 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 CSPG4Q6UVK1 2322 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 GNRH2O43555 120 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 C10orf126Q8N4M7 172 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 C2orf70A6NJV1 201 aa15.27■□□□□ 0.04
PCDH8-202ENST00000377942 A0A087X0K7 114 aa15.26■□□□□ 0.03
PCDH8-202ENST00000377942 TRAV8-2A0A0B4J237 113 aa15.26■□□□□ 0.03
PCDH8-202ENST00000377942 GAGE6Q13070 117 aa15.26■□□□□ 0.03
PCDH8-202ENST00000377942 CEP192Q8TEP8 1941 aa15.26■□□□□ 0.03
PCDH8-202ENST00000377942 IGHV1-24A0A0C4DH33 117 aa15.26■□□□□ 0.03
PCDH8-202ENST00000377942 GATD1Q8NB37 220 aa15.26■□□□□ 0.03
PCDH8-202ENST00000377942 FAM167A-AS1Q96KT0 104 aa15.26■□□□□ 0.03
PCDH8-202ENST00000377942 NOP10Q9NPE3 64 aaKnown RBP15.26■□□□□ 0.03
PCDH8-202ENST00000377942 IGHV3-38A0A0C4DH36 116 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 STPG4Q8N801 248 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 MEGF9Q9H1U4 602 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 MPV17L2Q567V2 206 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 C4orf3Q8WVX3 66 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 IGF2BP2-AS1Q96M15 143 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 DYSFO75923 2080 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 C22orf34Q6ZV56 151 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 C20orf144Q9BQM9 153 aa15.25■□□□□ 0.03
PCDH8-202ENST00000377942 C16orf74Q96GX8 76 aa15.24■□□□□ 0.03
PCDH8-202ENST00000377942 APRG1Q8IVJ8 170 aa15.23■□□□□ 0.03
PCDH8-202ENST00000377942 P0C879 139 aa15.23■□□□□ 0.03
PCDH8-202ENST00000377942 ZNF664Q8N3J9 261 aa15.23■□□□□ 0.03
PCDH8-202ENST00000377942 NCOR2Q9Y618 2525 aa15.23■□□□□ 0.03
PCDH8-202ENST00000377942 F8VRH5 84 aa15.23■□□□□ 0.03
PCDH8-202ENST00000377942 KLF5Q13887 457 aaPredicted RBP15.23■□□□□ 0.03
PCDH8-202ENST00000377942 MORN5Q5VZ52 161 aa15.23■□□□□ 0.03
PCDH8-202ENST00000377942 FANCD2OSQ96PS1 177 aa15.23■□□□□ 0.03
PCDH8-202ENST00000377942 E7EUB6 86 aa15.22■□□□□ 0.03
PCDH8-202ENST00000377942 ATRXP46100 2492 aa15.22■□□□□ 0.03
PCDH8-202ENST00000377942 HERVK_113P63121 156 aa15.22■□□□□ 0.03
PCDH8-202ENST00000377942 PTPN13Q12923 2485 aa15.22■□□□□ 0.03
PCDH8-202ENST00000377942 MED12LQ86YW9 2145 aa15.22■□□□□ 0.03
PCDH8-202ENST00000377942 DNAJC30Q96LL9 226 aa15.22■□□□□ 0.03
PCDH8-202ENST00000377942 EP400Q96L91 3159 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms