RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 LYNX1P0DP58 116 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 PSMG4Q5JS54 123 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 RITA1Q96K30 269 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 ATP5LO75964 103 aa12.08□□□□□ -0.47
FXN-201ENST00000377270 FSTL3O95633 263 aa12.08□□□□□ -0.47
FXN-201ENST00000377270 HBDP02042 147 aa12.08□□□□□ -0.47
FXN-201ENST00000377270 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.47
FXN-201ENST00000377270 Q5XG85 94 aa12.08□□□□□ -0.47
FXN-201ENST00000377270 C8orf31Q8N9H6 132 aa12.08□□□□□ -0.47
FXN-201ENST00000377270 TMEM167AQ8TBQ9 72 aa12.08□□□□□ -0.47
FXN-201ENST00000377270 A0A1B0GUT8 65 aa12.08□□□□□ -0.48
FXN-201ENST00000377270 UQCRQO14949 82 aa12.08□□□□□ -0.48
FXN-201ENST00000377270 C10orf55Q5SWW7 151 aa12.08□□□□□ -0.48
FXN-201ENST00000377270 NPIPB3Q92617 1050 aa12.08□□□□□ -0.48
FXN-201ENST00000377270 DLL1O00548 723 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 CRYGDP07320 174 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 RPL35AP18077 110 aaKnown RBP12.07□□□□□ -0.48
FXN-201ENST00000377270 LINC00526Q96FQ7 95 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 TPRP12270 2363 aaKnown RBP12.07□□□□□ -0.48
FXN-201ENST00000377270 IGF2RP11717 2491 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 OVOL3O00110 214 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 LYRM7Q5U5X0 104 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 IGHV3-72A0A0B4J1Y9 119 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
FXN-201ENST00000377270 DLX1P56177 255 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 RIGQ13278 110 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 LINC00305Q7Z4B0 112 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 Q8N1Y9 231 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 PKIGQ9Y2B9 76 aa12.07□□□□□ -0.48
FXN-201ENST00000377270 CGB1A6NKQ9 187 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 SLC25A20O43772 301 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 MALP21145 153 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 PRB3Q04118 309 aaPredicted RBP12.06□□□□□ -0.48
FXN-201ENST00000377270 PRO0628Q9UI54 55 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 NPYP01303 97 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 ARMS2P0C7Q2 107 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 GAGE2AQ6NT46 116 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 IGFBPL1Q8WX77 278 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 TRGV9Q99603 122 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 TPSG1Q9NRR2 321 aa12.06□□□□□ -0.48
FXN-201ENST00000377270 RELNP78509 3460 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 OXTP01178 125 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 IGHV3-48P01763 117 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 IGKCP01834 107 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 TCRAP04437 139 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 VMA21Q3ZAQ7 101 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 ZMAT4Q9H898 229 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 INS-IGF2F8WCM5 200 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 CCL21O00585 134 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 HLA-DRB4P13762 266 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 OR11H6Q8NGC7 330 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 NTN5Q8WTR8 489 aaPredicted RBP12.05□□□□□ -0.48
FXN-201ENST00000377270 HLA-DRB4X5D2U9 266 aa12.05□□□□□ -0.48
FXN-201ENST00000377270 NBASA2RRP1 2371 aa12.04□□□□□ -0.48
FXN-201ENST00000377270 ANKHD1Q8IWZ3 2542 aaKnown RBP12.04□□□□□ -0.48
FXN-201ENST00000377270 NAV3Q8IVL0 2385 aa12.04□□□□□ -0.48
FXN-201ENST00000377270 MALRD1Q5VYJ5 2156 aa12.04□□□□□ -0.48
FXN-201ENST00000377270 PLXNB1O43157 2135 aa12.04□□□□□ -0.48
FXN-201ENST00000377270 SUB1P53999 127 aaKnown RBP eCLIP12.04□□□□□ -0.48
FXN-201ENST00000377270 CEMP1Q6PRD7 247 aaPredicted RBP12.04□□□□□ -0.48
FXN-201ENST00000377270 ABCA4P78363 2273 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 TRGV11A0A075B6L2 103 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 LRBAP50851 2863 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 TIMM23O14925 209 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 EFNA4P52798 201 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 PMVKQ15126 192 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 ZNF56Q15929 161 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 Q86TA4 180 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 RNF125Q96EQ8 232 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 DPH3Q96FX2 82 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 JPT2Q9H910 190 aa12.03□□□□□ -0.48
FXN-201ENST00000377270 AAMDCQ9H7C9 122 aa12.02□□□□□ -0.49
FXN-201ENST00000377270 IGKV1D-37A0A075B6S9 117 aa12.02□□□□□ -0.49
FXN-201ENST00000377270 MRGPRG-AS1Q2M3A8 158 aa12.02□□□□□ -0.49
FXN-201ENST00000377270 SRSF12Q8WXF0 261 aaKnown RBP12.02□□□□□ -0.49
FXN-201ENST00000377270 V9GYY9 64 aa12.02□□□□□ -0.49
FXN-201ENST00000377270 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
FXN-201ENST00000377270 POM121L12Q8N7R1 296 aa12.01□□□□□ -0.49
FXN-201ENST00000377270 Q9H3A6 140 aa12.01□□□□□ -0.49
FXN-201ENST00000377270 D6R8Y8 96 aa12.01□□□□□ -0.49
FXN-201ENST00000377270 CNTFRP26992 372 aa12.01□□□□□ -0.49
FXN-201ENST00000377270 FBXL19-AS1Q494R0 122 aa12.01□□□□□ -0.49
FXN-201ENST00000377270 HCP5Q6MZN7 132 aa12.01□□□□□ -0.49
FXN-201ENST00000377270 SPANXCQ9NY87 97 aa12.01□□□□□ -0.49
FXN-201ENST00000377270 ATRXP46100 2492 aa12□□□□□ -0.49
FXN-201ENST00000377270 TACC2O95359 2948 aa12□□□□□ -0.49
FXN-201ENST00000377270 IGLV1-47P01700 117 aa12□□□□□ -0.49
FXN-201ENST00000377270 APELAP0DMC3 54 aa12□□□□□ -0.49
FXN-201ENST00000377270 COX7A1P24310 79 aa12□□□□□ -0.49
FXN-201ENST00000377270 PAX8Q06710 450 aa12□□□□□ -0.49
FXN-201ENST00000377270 CDSNQ15517 529 aa12□□□□□ -0.49
FXN-201ENST00000377270 MRPL36Q9P0J6 103 aaKnown RBP12□□□□□ -0.49
FXN-201ENST00000377270 OVOL1O14753 267 aa12□□□□□ -0.49
FXN-201ENST00000377270 CRIP2P52943 208 aaPredicted RBP12□□□□□ -0.49
FXN-201ENST00000377270 THAP8Q8NA92 274 aa12□□□□□ -0.49
FXN-201ENST00000377270 U3KQK5 164 aa12□□□□□ -0.49
FXN-201ENST00000377270 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
FXN-201ENST00000377270 BUB1B-PAK6H3BSN5 160 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms