RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 RFNGQ9Y644 331 aa4.1□□□□□ -1.75
SSX1-201ENST00000376919 HLA-DRB4X5D2U9 266 aa4.1□□□□□ -1.75
SSX1-201ENST00000376919 TRBV19A0A075B6N1 114 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 G3V3Q6 166 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 H3BQ15 152 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 SLC17A3O00476 420 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 SOCS3O14543 225 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 ZNF253O75346 499 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 CXorf1O96002 111 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 INSP01308 110 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 NBEAP1P0C6P0 100 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 ZNF705DP0CH99 300 aaPredicted RBP4.09□□□□□ -1.75
SSX1-201ENST00000376919 ZNF705BP0CI00 300 aaPredicted RBP4.09□□□□□ -1.75
SSX1-201ENST00000376919 ARL14EPLP0DKL9 152 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 PRB4P10163 310 aaPredicted RBP4.09□□□□□ -1.75
SSX1-201ENST00000376919 DEFB1P60022 68 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 RANP62826 216 aaKnown RBP4.09□□□□□ -1.75
SSX1-201ENST00000376919 PDE6HQ13956 83 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 GDF5OSQ5U4N7 250 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 EXOC3-AS1Q8N2X6 119 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 FAM213BQ8TBF2 198 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 TM2D3Q9BRN9 247 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 ZNF586Q9NXT0 402 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 XCL2Q9UBD3 114 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 PRELID1Q9Y255 219 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 GOLT1BQ9Y3E0 138 aa4.09□□□□□ -1.75
SSX1-201ENST00000376919 NBEAL2Q6ZNJ1 2754 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 TRAV8-2A0A0B4J237 113 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 A0A0J9YX75 114 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 CTXND1A0A1B0GTU2 59 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 A0A1B0GV50 99 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 A0A1B0GVG6 124 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 MAP1LC3B2A6NCE7 125 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 ZNF705FA8MVS1 300 aaPredicted RBP4.08□□□□□ -1.76
SSX1-201ENST00000376919 UMAD1C9J7I0 102 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 H3BMM0 161 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 MRPS12O15235 138 aaKnown RBP4.08□□□□□ -1.76
SSX1-201ENST00000376919 AMBPP02760 352 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 SLC25A5P05141 298 aaKnown RBP4.08□□□□□ -1.76
SSX1-201ENST00000376919 TSPOP30536 169 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 LEPP41159 167 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 SPINK13Q1W4C9 94 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 TMEM78Q5T7P6 136 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 Q6ZRP5 223 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 BAP18Q8IXM2 172 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 OR8A1Q8NGG7 326 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 OR11H2Q8NH07 326 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 STAB2Q8WWQ8 2551 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 FXYD5Q96DB9 178 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 PHYHIPLQ96FC7 376 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 RARRES2Q99969 163 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 MAP1LC3BQ9GZQ8 125 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 SLC35B3Q9H1N7 401 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 Q9H3A6 140 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 TMEM167BQ9NRX6 74 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 TENM3Q9P273 2699 aa4.08□□□□□ -1.76
SSX1-201ENST00000376919 COL7A1Q02388 2944 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 IGKV2-40A0A087WW87 121 aaPredicted RBP4.07□□□□□ -1.76
SSX1-201ENST00000376919 M0R2Z0 102 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 M0R3E3 92 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 IFNA7P01567 189 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 IGKV2D-40P01614 121 aaPredicted RBP4.07□□□□□ -1.76
SSX1-201ENST00000376919 SEC11BP0C7V7 166 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 GATA1P15976 413 aaPredicted RBP4.07□□□□□ -1.76
SSX1-201ENST00000376919 GCHFRP30047 84 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 FGF8P55075 233 aaPredicted RBP4.07□□□□□ -1.76
SSX1-201ENST00000376919 UBE2G2P60604 165 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 SLAQ13239 276 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 LINC00322Q6ZN03 302 aaPredicted RBP4.07□□□□□ -1.76
SSX1-201ENST00000376919 SLC51BQ86UW2 128 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 LYPD1Q8N2G4 141 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 RPP25LQ8N5L8 163 aaKnown RBP4.07□□□□□ -1.76
SSX1-201ENST00000376919 RXFP4Q8TDU9 374 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 FAM167A-AS1Q96KT0 104 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 C9orf85Q96MD7 179 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 NDFIP1Q9BT67 221 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 CYTL1Q9NRR1 136 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 TP53TG1Q9Y2A0 90 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 DNAH9Q9NYC9 4486 aa4.07□□□□□ -1.76
SSX1-201ENST00000376919 TRAV12-2A0A075B6T6 113 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 A0A0J9YWU9 116 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 PGPA6NDG6 321 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 HBE1P02100 147 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 HTN1P15515 57 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 HNRNPA3P51991 378 aaKnown RBP4.06□□□□□ -1.76
SSX1-201ENST00000376919 NKX2-5P52952 324 aaPredicted RBP4.06□□□□□ -1.76
SSX1-201ENST00000376919 EMP1P54849 157 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 CD300CQ08708 224 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 ERCC8Q13216 396 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 LGALSLQ3ZCW2 172 aaPredicted RBP4.06□□□□□ -1.76
SSX1-201ENST00000376919 DPPA3Q6W0C5 159 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 GOLT1AQ6ZVE7 132 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 SFT2D1Q8WV19 159 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 OTORQ9NRC9 128 aa4.06□□□□□ -1.76
SSX1-201ENST00000376919 TEX48A0A1B0GUV7 120 aa4.05□□□□□ -1.76
SSX1-201ENST00000376919 ZNF705EA8MWA4 302 aaPredicted RBP4.05□□□□□ -1.76
SSX1-201ENST00000376919 F6UZH7 168 aa4.05□□□□□ -1.76
SSX1-201ENST00000376919 DEFB4AO15263 64 aa4.05□□□□□ -1.76
SSX1-201ENST00000376919 IFNA1P01562 189 aa4.05□□□□□ -1.76
SSX1-201ENST00000376919 GPX1P07203 203 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms