RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 U3KQE9 123 aa10.71□□□□□ -0.69
MSH5-202ENST00000375740 A0A1B0GV72 72 aa10.71□□□□□ -0.7
MSH5-202ENST00000375740 SIVA1O15304 175 aa10.71□□□□□ -0.7
MSH5-202ENST00000375740 IGHG2P01859 326 aa10.71□□□□□ -0.7
MSH5-202ENST00000375740 INSL3P51460 131 aa10.71□□□□□ -0.7
MSH5-202ENST00000375740 Q6AWC8 147 aa10.71□□□□□ -0.7
MSH5-202ENST00000375740 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.7
MSH5-202ENST00000375740 Q6ZS46 218 aa10.71□□□□□ -0.7
MSH5-202ENST00000375740 SPAG8Q99932 426 aaPredicted RBP10.71□□□□□ -0.7
MSH5-202ENST00000375740 TRAV26-1A0A087WT03 109 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 ARL3P36405 182 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 DSCR9P59020 149 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 PHLDA1Q8WV24 401 aaPredicted RBP10.7□□□□□ -0.7
MSH5-202ENST00000375740 SPANXB1Q9NS25 103 aaPredicted RBP10.7□□□□□ -0.7
MSH5-202ENST00000375740 UTP20O75691 2785 aaKnown RBP10.7□□□□□ -0.7
MSH5-202ENST00000375740 SCGB1A1P11684 91 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 PPIFP30405 207 aaKnown RBP10.7□□□□□ -0.7
MSH5-202ENST00000375740 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 SLC50A1Q9BRV3 221 aa10.7□□□□□ -0.7
MSH5-202ENST00000375740 TRAV8-2A0A0B4J237 113 aa10.69□□□□□ -0.7
MSH5-202ENST00000375740 A0A1B0GW15 77 aa10.69□□□□□ -0.7
MSH5-202ENST00000375740 SMKR1H3BMG3 65 aa10.69□□□□□ -0.7
MSH5-202ENST00000375740 TRBV12-3P01733 135 aa10.69□□□□□ -0.7
MSH5-202ENST00000375740 AMTNQ6UX39 209 aa10.69□□□□□ -0.7
MSH5-202ENST00000375740 CKS1BP61024 79 aa10.69□□□□□ -0.7
MSH5-202ENST00000375740 NHP2Q9NX24 153 aaKnown RBP10.69□□□□□ -0.7
MSH5-202ENST00000375740 H3BMG7 143 aa10.68□□□□□ -0.7
MSH5-202ENST00000375740 IFI27L1Q96BM0 104 aa10.68□□□□□ -0.7
MSH5-202ENST00000375740 KLK15Q9H2R5 256 aa10.68□□□□□ -0.7
MSH5-202ENST00000375740 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
MSH5-202ENST00000375740 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
MSH5-202ENST00000375740 RBAKDNA6NC62 111 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 CRYBA4P53673 196 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 PRELID3AQ96N28 172 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 FABP5P3A8MUU1 101 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 PF4V1P10720 104 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 SLC25A16P16260 332 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.77e-7■■■□□ 15.3
MSH5-202ENST00000375740 AGPAT4-IT1Q9H0P7 198 aa10.67□□□□□ -0.7
MSH5-202ENST00000375740 ORM1P02763 201 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 COX6B1P14854 86 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 FOXI2Q6ZQN5 318 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 ZNF493Q6ZR52 646 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 IL17RELQ6ZVW7 336 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 USMG5Q96IX5 58 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 MAP1AP78559 2803 aaPredicted RBP10.66□□□□□ -0.7
MSH5-202ENST00000375740 CRYBG3Q68DQ2 2970 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 H3BUA1 57 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 BRI3O95415 125 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 HBDP02042 147 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 GATA3P23771 443 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 LCNL1Q6ZST4 164 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 SPATA25Q9BR10 227 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 CHAC1Q9BUX1 264 aa10.66□□□□□ -0.7
MSH5-202ENST00000375740 CELSR2Q9HCU4 2923 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 GAS8-AS1O95177 125 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 SCGB2A2Q13296 93 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 LINC01356Q8N9X3 169 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 GLMPQ8WWB7 406 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 NDUFA4O00483 81 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 NPYP01303 97 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 ZNF843Q8N446 348 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 MAPK1IP1LQ8NDC0 245 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 HHLA3Q9XRX5 114 aa10.65□□□□□ -0.7
MSH5-202ENST00000375740 USP24Q9UPU5 2620 aa10.65□□□□□ -0.71
MSH5-202ENST00000375740 IGLC6P0CF74 106 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 SRSF2Q01130 221 aaKnown RBP10.64□□□□□ -0.71
MSH5-202ENST00000375740 MRPL51Q4U2R6 128 aaKnown RBP10.64□□□□□ -0.71
MSH5-202ENST00000375740 C16orf92Q96LL3 132 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 AGRNO00468 2067 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 TRBV25-1A0A075B6N4 114 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 A0A096LNT2 108 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 GTSCR1Q86UQ5 136 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 MRPL53Q96EL3 112 aaKnown RBP10.64□□□□□ -0.71
MSH5-202ENST00000375740 PSMG3-AS1Q96PY0 264 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 MYO18BQ8IUG5 2567 aa10.64□□□□□ -0.71
MSH5-202ENST00000375740 IGLL5B9A064 214 aa10.63□□□□□ -0.71
MSH5-202ENST00000375740 E9PLD3 99 aa10.63□□□□□ -0.71
MSH5-202ENST00000375740 IGLV1-40P01703 118 aa10.63□□□□□ -0.71
MSH5-202ENST00000375740 DEFB112Q30KQ8 113 aa10.63□□□□□ -0.71
MSH5-202ENST00000375740 C20orf78Q9BR46 151 aa10.63□□□□□ -0.71
MSH5-202ENST00000375740 TWIST1Q15672 202 aa10.63□□□□□ -0.71
MSH5-202ENST00000375740 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
MSH5-202ENST00000375740 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
MSH5-202ENST00000375740 TGFAP01135 160 aa10.62□□□□□ -0.71
MSH5-202ENST00000375740 IGHV4-59P01825 116 aa10.62□□□□□ -0.71
MSH5-202ENST00000375740 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
MSH5-202ENST00000375740 U3KQK5 164 aa10.62□□□□□ -0.71
MSH5-202ENST00000375740 F8W1H4 67 aa10.62□□□□□ -0.71
MSH5-202ENST00000375740 C9orf47Q6ZRZ4 202 aa10.62□□□□□ -0.71
MSH5-202ENST00000375740 CFHR3Q02985 330 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 TMEM95Q3KNT9 176 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.61□□□□□ -0.711e-7■■■■□ 22.7
Retrieved 100 of 20,778 RNA–protein pairs in 283.1 ms