RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 FAM3BP58499 235 aaPredicted RBP8.6□□□□□ -1.03
LSM2-208ENST00000375661 TAS2R60P59551 318 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 IFITM2Q01629 132 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 MEF2BQ02080 365 aaPredicted RBP8.6□□□□□ -1.03
LSM2-208ENST00000375661 TMEM183BQ1AE95 376 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 Q86TA4 180 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 C11orf52Q96A22 123 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 C8orf49Q96NF6 230 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 VAX2Q9UIW0 290 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 RBFOX3A6NFN3 312 aa8.59□□□□□ -1.03
LSM2-208ENST00000375661 TAGLN2P37802 199 aaKnown RBP8.59□□□□□ -1.03
LSM2-208ENST00000375661 ZNF80P51504 273 aaPredicted RBP8.59□□□□□ -1.03
LSM2-208ENST00000375661 RRN3P1Q2M238 152 aa8.59□□□□□ -1.03
LSM2-208ENST00000375661 SAPCD1Q5SSQ6 148 aa8.59□□□□□ -1.03
LSM2-208ENST00000375661 Q6AWC8 147 aa8.59□□□□□ -1.03
LSM2-208ENST00000375661 NIPSNAP3BQ9BS92 247 aa8.59□□□□□ -1.03
LSM2-208ENST00000375661 HTN1P15515 57 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 UBE2G1P62253 170 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 ZNF506Q5JVG8 444 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 FMC1Q96HJ9 113 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 PYGO2Q9BRQ0 406 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 LINC00467Q9BRT7 94 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 NDFIP1Q9BT67 221 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 DERL1Q9BUN8 251 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 DKK2Q9UBU2 259 aa8.58□□□□□ -1.04
LSM2-208ENST00000375661 PLAC8L1A1L4L8 177 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 PDE6DO43924 150 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 LTAP01374 205 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 S100A9P06702 114 aaKnown RBP8.57□□□□□ -1.04
LSM2-208ENST00000375661 SMUG1Q53HV7 270 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 TOR2AQ5JU69 321 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 COX8CQ7Z4L0 72 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 FAM210AQ96ND0 272 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 ZFP30Q9Y2G7 519 aa8.57□□□□□ -1.04
LSM2-208ENST00000375661 IGHV1OR15-1A0A075B7D0 117 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 TRAV21A0A0B4J279 112 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 GCGP01275 180 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 RPL35P42766 123 aaKnown RBP8.56□□□□□ -1.04
LSM2-208ENST00000375661 CRIP1P50238 77 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 EMP1P54849 157 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 MUC21Q5SSG8 566 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 FAM222AQ5U5X8 452 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 TMEM183AQ8IXX5 376 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
LSM2-208ENST00000375661 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 RNASE8Q8TDE3 154 aaKnown RBP8.56□□□□□ -1.04
LSM2-208ENST00000375661 ZC2HC1AQ96GY0 325 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 MLST8Q9BVC4 326 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 MED9Q9NWA0 146 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 C11orf21Q9P2W6 132 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 TP53TG3Q9ULZ0 132 aa8.56□□□□□ -1.04
LSM2-208ENST00000375661 RAB19A4D1S5 217 aa8.55□□□□□ -1.04
LSM2-208ENST00000375661 ANXA2RQ3ZCQ2 193 aa8.55□□□□□ -1.04
LSM2-208ENST00000375661 ZNF493Q6ZR52 646 aa8.55□□□□□ -1.04
LSM2-208ENST00000375661 BAGE2Q86Y30 109 aa8.55□□□□□ -1.04
LSM2-208ENST00000375661 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
LSM2-208ENST00000375661 TMEM263Q8WUH6 116 aaKnown RBP8.55□□□□□ -1.04
LSM2-208ENST00000375661 C16orf74Q96GX8 76 aa8.55□□□□□ -1.04
LSM2-208ENST00000375661 RGS13O14921 159 aa8.54□□□□□ -1.04
LSM2-208ENST00000375661 IGLV2-8P01709 118 aa8.54□□□□□ -1.04
LSM2-208ENST00000375661 PFN1P07737 140 aaKnown RBP8.54□□□□□ -1.04
LSM2-208ENST00000375661 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
LSM2-208ENST00000375661 TDRG1Q3Y452 100 aa8.54□□□□□ -1.04
LSM2-208ENST00000375661 NHLRC2Q8NBF2 726 aa8.54□□□□□ -1.04
LSM2-208ENST00000375661 C11orf72Q8NBR9 251 aa8.54□□□□□ -1.04
LSM2-208ENST00000375661 EIF5A2Q9GZV4 153 aaKnown RBP8.54□□□□□ -1.04
LSM2-208ENST00000375661 TRBV20OR9-2A0A075B6H5 130 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 CBY3A6NI87 242 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 FABP5P3A8MUU1 101 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 C9JQL5 133 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 TMEM250H0YL14 139 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 GNRH2O43555 120 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 NDUFS6O75380 124 aaKnown RBP8.53□□□□□ -1.04
LSM2-208ENST00000375661 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
LSM2-208ENST00000375661 TNP2Q05952 138 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 CENPWQ5EE01 88 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 CLLU1Q5K131 121 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 TMEM88Q6PEY1 159 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 Q8N1X5 172 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 GSN-AS1Q9NRJ2 163 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 NAGKQ9UJ70 344 aa8.53□□□□□ -1.04
LSM2-208ENST00000375661 IGKV3D-20A0A0C4DH25 116 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 SH2D1AO60880 128 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 TYMSP04818 313 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 HTN3P15516 51 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 RAB14P61106 215 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 DAD1P61803 113 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 ZNF674Q2M3X9 581 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 C6orf223Q8N319 242 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 PARLQ9H300 379 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 MDFICQ9P1T7 246 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 HSPG2P98160 4391 aa8.52□□□□□ -1.05
LSM2-208ENST00000375661 NBDYA0A0U1RRE5 68 aa8.51□□□□□ -1.05
LSM2-208ENST00000375661 PGPEP1LA6NFU8 196 aa8.51□□□□□ -1.05
LSM2-208ENST00000375661 GNG4P50150 75 aa8.51□□□□□ -1.05
LSM2-208ENST00000375661 TCL1AP56279 114 aa8.51□□□□□ -1.05
LSM2-208ENST00000375661 IBA57Q5T440 356 aaKnown RBP8.51□□□□□ -1.05
LSM2-208ENST00000375661 FAM162BQ5T6X4 162 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms