RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 OR9G4Q8NGQ1 327 aa13.48□□□□□ -0.25
HLA-DQB1-201ENST00000374943 TRAV2A0A0B4J234 112 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 MUC21A0A0G2JKD1 596 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 A0A0J9YX75 114 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 MUC21A0A140T8X8 626 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 SCGB1D1O95968 90 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 HILS1P60008 231 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 CACNG7P62955 275 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 PSMG4Q5JS54 123 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 MUC21Q5SSG8 566 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 FAM19A2Q8N3H0 131 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 ZNF418Q8TF45 676 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 TFPI2P48307 235 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 MRPL51Q4U2R6 128 aaKnown RBP13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 ORMDL3Q8N138 153 aa13.47□□□□□ -0.25
HLA-DQB1-201ENST00000374943 D6R8Y8 96 aa13.46□□□□□ -0.26
HLA-DQB1-201ENST00000374943 LINC00614P0C842 121 aa13.46□□□□□ -0.26
HLA-DQB1-201ENST00000374943 MED14OSP0DP75 135 aa13.46□□□□□ -0.26
HLA-DQB1-201ENST00000374943 KRTAP21-3Q3LHN1 58 aa13.46□□□□□ -0.26
HLA-DQB1-201ENST00000374943 MSRB1Q9NZV6 116 aa13.46□□□□□ -0.26
HLA-DQB1-201ENST00000374943 RNF114Q9Y508 228 aa13.46□□□□□ -0.26
HLA-DQB1-201ENST00000374943 J3KRW8 73 aa13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 M0R2Z0 102 aa13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 RNASE4P34096 147 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 LEPP41159 167 aa13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 SSTP61278 116 aa13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 FHL3Q13643 280 aa13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 DLX4Q92988 240 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 RNF185Q96GF1 192 aa13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 SETD2Q9BYW2 2564 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-201ENST00000374943 CSN3P07498 182 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 PKIAP61925 76 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 EBLN2Q6P2I7 272 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 OR10AG1Q8NH19 301 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 LINC01006Q8NI28 216 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 PRELID3AQ96N28 172 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 NF1P21359 2839 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 MTORP42345 2549 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 DUSP14O95147 198 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 PPBPP02775 128 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 CD33P20138 364 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 RAB4AP20338 218 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 ANXA2RQ3ZCQ2 193 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 FOXI2Q6ZQN5 318 aa13.44□□□□□ -0.26
HLA-DQB1-201ENST00000374943 IGHV1-24A0A0C4DH33 117 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 H3BVH4 76 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 NDUFA7O95182 113 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 ASIPP42127 132 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 KRTDAPP60985 99 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 KIR3DS1Q14943 382 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 Q8N976 141 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 RAX2Q96IS3 184 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 DUX3Q96PT4 197 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 LAMTOR2Q9Y2Q5 125 aa13.43□□□□□ -0.26
HLA-DQB1-201ENST00000374943 AGRNO00468 2067 aa13.42□□□□□ -0.26
HLA-DQB1-201ENST00000374943 C3orf79P0CE67 100 aa13.42□□□□□ -0.26
HLA-DQB1-201ENST00000374943 CD28P10747 220 aa13.42□□□□□ -0.26
HLA-DQB1-201ENST00000374943 CKS2P33552 79 aa13.42□□□□□ -0.26
HLA-DQB1-201ENST00000374943 TEX43Q6ZNM6 134 aa13.42□□□□□ -0.26
HLA-DQB1-201ENST00000374943 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
HLA-DQB1-201ENST00000374943 TSTD3H0UI37 97 aa13.41□□□□□ -0.26
HLA-DQB1-201ENST00000374943 JMJD8Q96S16 334 aa13.41□□□□□ -0.26
HLA-DQB1-201ENST00000374943 SMR3AQ99954 134 aa13.41□□□□□ -0.26
HLA-DQB1-201ENST00000374943 TSSC4Q9Y5U2 329 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB1-201ENST00000374943 C7orf71A4D174 169 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 LINC00587B1AMM8 73 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 LY6G6DO95868 133 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 SPANXN1Q5VSR9 72 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 SMIM15Q7Z3B0 74 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 ZNF664Q8N3J9 261 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 AP5S1Q9NUS5 200 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 HIVEP2P31629 2446 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 A8MTW9 85 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 TSPOP30536 169 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 FA2HQ7L5A8 372 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 TMEM61Q8N0U2 210 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 DYNLRB2Q8TF09 96 aa13.4□□□□□ -0.26
HLA-DQB1-201ENST00000374943 S100A4P26447 101 aaKnown RBP13.39□□□□□ -0.27
HLA-DQB1-201ENST00000374943 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
HLA-DQB1-201ENST00000374943 PRSS3P2Q8NHM4 247 aa13.39□□□□□ -0.27
HLA-DQB1-201ENST00000374943 SIGLEC8Q9NYZ4 499 aa13.39□□□□□ -0.27
HLA-DQB1-201ENST00000374943 SORL1Q92673 2214 aa13.39□□□□□ -0.27
HLA-DQB1-201ENST00000374943 CCL24O00175 119 aa13.38□□□□□ -0.27
HLA-DQB1-201ENST00000374943 NPYP01303 97 aa13.38□□□□□ -0.27
HLA-DQB1-201ENST00000374943 CDKN1BP46527 198 aa13.38□□□□□ -0.27
HLA-DQB1-201ENST00000374943 TDRG1Q3Y452 100 aa13.38□□□□□ -0.27
HLA-DQB1-201ENST00000374943 AMTNQ6UX39 209 aa13.38□□□□□ -0.27
HLA-DQB1-201ENST00000374943 CITED2Q99967 270 aaPredicted RBP13.38□□□□□ -0.27
HLA-DQB1-201ENST00000374943 CUBNO60494 3623 aa13.38□□□□□ -0.27
HLA-DQB1-201ENST00000374943 SMKR1H3BMG3 65 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 TCF21O43680 179 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 NXPH4O95158 308 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 RNASE3P12724 160 aaKnown RBP13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 EVI2AP22794 236 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 PMCHL1Q16048 86 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 FAM159AQ6UWV7 190 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 MUC4Q99102 2169 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 TRAV25A0A0B4J276 109 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 KIR2DL5BA0A0G2JN68 375 aa13.37□□□□□ -0.27
HLA-DQB1-201ENST00000374943 KIR2DL5BA0A0G2JPC4 375 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms