RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 FAM223BA6NKX1 122 aa14□□□□□ -0.17
RXRB-202ENST00000374685 LEPROTL1O95214 131 aa14□□□□□ -0.17
RXRB-202ENST00000374685 FAM223AQ8IWN6 122 aa14□□□□□ -0.17
RXRB-202ENST00000374685 LINC01356Q8N9X3 169 aa14□□□□□ -0.17
RXRB-202ENST00000374685 IGHV1-24A0A0C4DH33 117 aa14□□□□□ -0.17
RXRB-202ENST00000374685 TRBV6-1A0A0K0K1D8 114 aa14□□□□□ -0.17
RXRB-202ENST00000374685 HAX1O00165 279 aa14□□□□□ -0.17
RXRB-202ENST00000374685 MCRIP2Q9BUT9 160 aaKnown RBP14□□□□□ -0.17
RXRB-202ENST00000374685 A6NDN8 102 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 TWIST1Q15672 202 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 TM4SF20Q53R12 229 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 AMN1Q8IY45 258 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 OR10AG1Q8NH19 301 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 AGPAT4-IT1Q9H0P7 198 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 TENM4Q6N022 2769 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 TRAV8-2A0A0B4J237 113 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 H3BUT2 72 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 C19orf54Q5BKX5 351 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 GLMPQ8WWB7 406 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 MSRB1Q9NZV6 116 aa13.99□□□□□ -0.17
RXRB-202ENST00000374685 IGF1P05019 195 aa13.98□□□□□ -0.17
RXRB-202ENST00000374685 GTSF1LQ9H1H1 148 aa13.98□□□□□ -0.17
RXRB-202ENST00000374685 SMKR1H3BMG3 65 aa13.98□□□□□ -0.17
RXRB-202ENST00000374685 OR5AL1P0C617 328 aa13.98□□□□□ -0.17
RXRB-202ENST00000374685 RAB9AP51151 201 aa13.98□□□□□ -0.17
RXRB-202ENST00000374685 FOXE3Q13461 319 aa13.98□□□□□ -0.17
RXRB-202ENST00000374685 ITPR3Q14573 2671 aa13.98□□□□□ -0.17
RXRB-202ENST00000374685 NF1P21359 2839 aa13.98□□□□□ -0.17
RXRB-202ENST00000374685 A0A0G2JLM5 398 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 SLC25A16P16260 332 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 FXYD7P58549 80 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 HSD52Q0P140 79 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 SMAGPQ0VAQ4 97 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 TMEM78Q5T7P6 136 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 WFDC3Q8IUB2 231 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 FLNAP21333 2647 aaKnown RBP13.97□□□□□ -0.17
RXRB-202ENST00000374685 MTORP42345 2549 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 A6NJY4 79 aa13.97□□□□□ -0.17
RXRB-202ENST00000374685 MAP1LC3CQ9BXW4 147 aa13.96□□□□□ -0.17
RXRB-202ENST00000374685 F6UB75 175 aa13.96□□□□□ -0.17
RXRB-202ENST00000374685 SPRY2O43597 315 aa13.96□□□□□ -0.17
RXRB-202ENST00000374685 NCR2O95944 276 aa13.96□□□□□ -0.17
RXRB-202ENST00000374685 DSCR9P59020 149 aa13.96□□□□□ -0.17
RXRB-202ENST00000374685 SLC50A1Q9BRV3 221 aa13.96□□□□□ -0.17
RXRB-202ENST00000374685 BEX4Q9NWD9 120 aaPredicted RBP13.96□□□□□ -0.17
RXRB-202ENST00000374685 C20orf173Q96LM9 149 aa13.96□□□□□ -0.18
RXRB-202ENST00000374685 HELZ2Q9BYK8 2649 aaKnown RBP13.95□□□□□ -0.18
RXRB-202ENST00000374685 D6R8Y8 96 aa13.95□□□□□ -0.18
RXRB-202ENST00000374685 LINC01545Q5VT33 79 aa13.95□□□□□ -0.18
RXRB-202ENST00000374685 HIST2H2BDQ6DRA6 164 aa13.95□□□□□ -0.18
RXRB-202ENST00000374685 FABP5P3A8MUU1 101 aa13.95□□□□□ -0.18
RXRB-202ENST00000374685 CFAP161Q6P656 301 aa13.95□□□□□ -0.18
RXRB-202ENST00000374685 SPCS1Q9Y6A9 102 aa13.95□□□□□ -0.18
RXRB-202ENST00000374685 NOTCH2Q04721 2471 aa13.95□□□□□ -0.18
RXRB-202ENST00000374685 A0A1W2PPM0 123 aa13.94□□□□□ -0.18
RXRB-202ENST00000374685 KIR3DS1Q14943 382 aa13.94□□□□□ -0.18
RXRB-202ENST00000374685 PRSS3P2Q8NHM4 247 aa13.94□□□□□ -0.18
RXRB-202ENST00000374685 TEX48A0A1B0GUV7 120 aa13.93□□□□□ -0.18
RXRB-202ENST00000374685 CD300EQ496F6 205 aaPredicted RBP13.93□□□□□ -0.18
RXRB-202ENST00000374685 FGF6P10767 208 aa13.93□□□□□ -0.18
RXRB-202ENST00000374685 FAM106AQ4KMX7 169 aa13.93□□□□□ -0.18
RXRB-202ENST00000374685 DPF1Q92782 380 aa13.93□□□□□ -0.18
RXRB-202ENST00000374685 C11orf21Q9P2W6 132 aa13.93□□□□□ -0.18
RXRB-202ENST00000374685 Q96MF0 132 aa13.92□□□□□ -0.18
RXRB-202ENST00000374685 RHPN1-AS1Q9BWJ2 59 aa13.92□□□□□ -0.18
RXRB-202ENST00000374685 WNK1Q9H4A3 2382 aa13.92□□□□□ -0.18
RXRB-202ENST00000374685 CKS1BP61024 79 aa13.92□□□□□ -0.18
RXRB-202ENST00000374685 USMG5Q96IX5 58 aa13.92□□□□□ -0.18
RXRB-202ENST00000374685 HSPB8Q9UJY1 196 aa13.92□□□□□ -0.18
RXRB-202ENST00000374685 GAGE12HA6NDE8 117 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 NDUFA4O00483 81 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 KLK9Q2XQG4 91 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 TCTEX1D4Q5JR98 221 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 KLK9Q9UKQ9 250 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 U3KQE9 123 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 TRAV26-1A0A087WT03 109 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 A0A096LNT2 108 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 GATA3P23771 443 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 IFI27P40305 119 aaPredicted RBP13.91□□□□□ -0.18
RXRB-202ENST00000374685 CRIP2P52943 208 aaPredicted RBP13.91□□□□□ -0.18
RXRB-202ENST00000374685 RPL24P83731 157 aaKnown RBP13.91□□□□□ -0.18
RXRB-202ENST00000374685 NAA38Q9BRA0 125 aaKnown RBP13.91□□□□□ -0.18
RXRB-202ENST00000374685 ITPR2Q14571 2701 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 CRYBA4P53673 196 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 Q6AWC8 147 aa13.91□□□□□ -0.18
RXRB-202ENST00000374685 GPHB5Q86YW7 130 aa13.9□□□□□ -0.18
RXRB-202ENST00000374685 SPATA25Q9BR10 227 aa13.9□□□□□ -0.18
RXRB-202ENST00000374685 SNAI2O43623 268 aa13.9□□□□□ -0.18
RXRB-202ENST00000374685 GAS8-AS1O95177 125 aa13.9□□□□□ -0.18
RXRB-202ENST00000374685 LOXL1Q08397 574 aaPredicted RBP13.9□□□□□ -0.18
RXRB-202ENST00000374685 PRR9Q5T870 116 aa13.9□□□□□ -0.18
RXRB-202ENST00000374685 FA2HQ7L5A8 372 aa13.9□□□□□ -0.18
RXRB-202ENST00000374685 IGKV3D-20A0A0C4DH25 116 aa13.89□□□□□ -0.19
RXRB-202ENST00000374685 HOXA3O43365 443 aaPredicted RBP13.89□□□□□ -0.19
RXRB-202ENST00000374685 IGHV4-31P0DP07 118 aa13.89□□□□□ -0.19
RXRB-202ENST00000374685 CKS2P33552 79 aa13.89□□□□□ -0.19
RXRB-202ENST00000374685 FOXI2Q6ZQN5 318 aa13.89□□□□□ -0.19
RXRB-202ENST00000374685 ZNF575Q86XF7 245 aa13.89□□□□□ -0.19
RXRB-202ENST00000374685 PRELID3AQ96N28 172 aa13.89□□□□□ -0.19
RXRB-202ENST00000374685 IGLV1-40P01703 118 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms