RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ZNF705BP0CI00 300 aaPredicted RBP9.36□□□□□ -0.91
PRPF4-202ENST00000374199 SCGB2A2Q13296 93 aa9.36□□□□□ -0.91
PRPF4-202ENST00000374199 DOPEY2Q9Y3R5 2298 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 CREBBPQ92793 2442 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 IGLV2-18A0A075B6J9 118 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 F6UB75 175 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 TCAPO15273 167 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
PRPF4-202ENST00000374199 EBLN2Q6P2I7 272 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 FOXI2Q6ZQN5 318 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 MSRB1Q9NZV6 116 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 TMSB15BA0A087X1C1 80 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 AMTP48728 403 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 SLURP1P55000 103 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 DEFB1P60022 68 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 SPATA12Q7Z6I5 190 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 ORMDL3Q8N138 153 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 C20orf144Q9BQM9 153 aa9.35□□□□□ -0.91
PRPF4-202ENST00000374199 OR1N2Q8NGR9 330 aa9.34□□□□□ -0.91
PRPF4-202ENST00000374199 D6R8Y8 96 aa9.34□□□□□ -0.91
PRPF4-202ENST00000374199 LINC00467Q9BRT7 94 aa9.34□□□□□ -0.91
PRPF4-202ENST00000374199 C2orf88Q9BSF0 95 aa9.34□□□□□ -0.91
PRPF4-202ENST00000374199 PEMTQ9UBM1 199 aa9.34□□□□□ -0.91
PRPF4-202ENST00000374199 ADARB2-AS1A8MUL3 147 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 EREGO14944 169 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 G0S2P27469 103 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 LEPP41159 167 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 NRACQ8N912 160 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 OR10AG1Q8NH19 301 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 RAX2Q96IS3 184 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 SNRPD3P62318 126 aaKnown RBP9.33□□□□□ -0.92
PRPF4-202ENST00000374199 TWIST1Q15672 202 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 OR11H1Q8NG94 326 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 LINC01006Q8NI28 216 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 KIF25-AS1Q9Y6Z4 181 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 FAM19A2Q8N3H0 131 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 C9orf85Q96MD7 179 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 DUX5Q96PT3 197 aa9.33□□□□□ -0.92
PRPF4-202ENST00000374199 ZNF256Q9Y2P7 627 aaPredicted RBP9.33□□□□□ -0.92
PRPF4-202ENST00000374199 TRAV25A0A0B4J276 109 aa9.32□□□□□ -0.92
PRPF4-202ENST00000374199 KIR3DS1Q14943 382 aa9.32□□□□□ -0.92
PRPF4-202ENST00000374199 DLX4Q92988 240 aaPredicted RBP9.32□□□□□ -0.92
PRPF4-202ENST00000374199 NDUFAF3Q9BU61 184 aa9.32□□□□□ -0.92
PRPF4-202ENST00000374199 ANXA2RQ3ZCQ2 193 aa9.32□□□□□ -0.92
PRPF4-202ENST00000374199 PRELID3AQ96N28 172 aa9.32□□□□□ -0.92
PRPF4-202ENST00000374199 CD33P20138 364 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 DEFB136Q30KP8 78 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 DEFB114Q30KQ6 69 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 PRR31Q5SQ13 230 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 YAE1D1Q9NRH1 226 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 M0QZ24 198 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 HSBP1O75506 76 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 LINC00315P59091 139 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 C7orf71A4D174 169 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 DUSP14O95147 198 aaKnown RBP9.31□□□□□ -0.92
PRPF4-202ENST00000374199 NPYP01303 97 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 HLA-DRB4P13762 266 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
PRPF4-202ENST00000374199 MRAP2Q96G30 205 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 HLA-DRB4X5D2U9 266 aa9.31□□□□□ -0.92
PRPF4-202ENST00000374199 M0R2Z0 102 aa9.3□□□□□ -0.92
PRPF4-202ENST00000374199 TCF21O43680 179 aa9.3□□□□□ -0.92
PRPF4-202ENST00000374199 SRD5A1P18405 259 aa9.3□□□□□ -0.92
PRPF4-202ENST00000374199 BTF3P20290 206 aaKnown RBP9.3□□□□□ -0.92
PRPF4-202ENST00000374199 PROK1P58294 105 aa9.3□□□□□ -0.92
PRPF4-202ENST00000374199 PTH2Q96A98 100 aa9.3□□□□□ -0.92
PRPF4-202ENST00000374199 NUTF2P61970 127 aaKnown RBP9.3□□□□□ -0.92
PRPF4-202ENST00000374199 M0R381 172 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 GAS8-AS1O95177 125 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 PSMG4Q5JS54 123 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 TPPP3Q9BW30 176 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 SCGB1D1O95968 90 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 CD28P10747 220 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 RNASE4P34096 147 aaKnown RBP9.29□□□□□ -0.92
PRPF4-202ENST00000374199 IFI27P40305 119 aaPredicted RBP9.29□□□□□ -0.92
PRPF4-202ENST00000374199 ASIPP42127 132 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 RPL32P62910 135 aaKnown RBP9.29□□□□□ -0.92
PRPF4-202ENST00000374199 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
PRPF4-202ENST00000374199 LBHQ53QV2 105 aaPredicted RBP9.29□□□□□ -0.92
PRPF4-202ENST00000374199 KLHL30-AS1Q8NEE0 82 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 SPAG8Q99932 426 aaPredicted RBP9.29□□□□□ -0.92
PRPF4-202ENST00000374199 SNHG12Q9BXW3 62 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 AP5S1Q9NUS5 200 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 TSSC4Q9Y5U2 329 aaPredicted RBP9.29□□□□□ -0.92
PRPF4-202ENST00000374199 IGHV3-16A0A0C4DH30 117 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 ZNF747Q9BV97 191 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 EDA2RQ9HAV5 297 aa9.29□□□□□ -0.92
PRPF4-202ENST00000374199 ZNF688P0C7X2 276 aa9.28□□□□□ -0.92
PRPF4-202ENST00000374199 CDKN1BP46527 198 aa9.28□□□□□ -0.92
PRPF4-202ENST00000374199 MRPL52Q86TS9 123 aaKnown RBP9.28□□□□□ -0.92
PRPF4-202ENST00000374199 FAM110AQ9BQ89 295 aa9.28□□□□□ -0.92
PRPF4-202ENST00000374199 MUC4Q99102 2169 aa9.28□□□□□ -0.92
PRPF4-202ENST00000374199 RBMY1BA6NDE4 496 aaKnown RBP9.28□□□□□ -0.92
PRPF4-202ENST00000374199 RBMY1EA6NEQ0 496 aaKnown RBP9.28□□□□□ -0.92
PRPF4-202ENST00000374199 H3BMM0 161 aa9.28□□□□□ -0.92
PRPF4-202ENST00000374199 H3BVH4 76 aa9.28□□□□□ -0.92
PRPF4-202ENST00000374199 RBMY1DP0C7P1 496 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms