RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 TOR2AQ5JU69 321 aa13.06□□□□□ -0.32
PBX3-202ENST00000373482 FAM162BQ5T6X4 162 aa13.06□□□□□ -0.32
PBX3-202ENST00000373482 CEMP1Q6PRD7 247 aaPredicted RBP13.06□□□□□ -0.32
PBX3-202ENST00000373482 FAM210AQ96ND0 272 aa13.06□□□□□ -0.32
PBX3-202ENST00000373482 DERL1Q9BUN8 251 aa13.06□□□□□ -0.32
PBX3-202ENST00000373482 KLK5Q9Y337 293 aaPredicted RBP13.06□□□□□ -0.32
PBX3-202ENST00000373482 DEFB130BP0DP73 79 aa13.05□□□□□ -0.32
PBX3-202ENST00000373482 DEFB130AP0DP74 79 aa13.05□□□□□ -0.32
PBX3-202ENST00000373482 NHLRC2Q8NBF2 726 aa13.05□□□□□ -0.32
PBX3-202ENST00000373482 PCNPQ8WW12 178 aaKnown RBP13.05□□□□□ -0.32
PBX3-202ENST00000373482 TYMSP04818 313 aa13.04□□□□□ -0.32
PBX3-202ENST00000373482 RAB14P61106 215 aa13.04□□□□□ -0.32
PBX3-202ENST00000373482 MUC4Q99102 2169 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 DEFB131BA0A096LNP1 70 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 TMEM250H0YL14 139 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 GNRH2O43555 120 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 GNG4P50150 75 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 CENPWQ5EE01 88 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 SMIM12Q96EX1 92 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 SPXQ9BT56 116 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 MLST8Q9BVC4 326 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 C11orf21Q9P2W6 132 aa13.03□□□□□ -0.32
PBX3-202ENST00000373482 GAGE12BA1L429 117 aa13.02□□□□□ -0.33
PBX3-202ENST00000373482 SH2D1AO60880 128 aa13.02□□□□□ -0.33
PBX3-202ENST00000373482 NDUFS6O75380 124 aaKnown RBP13.02□□□□□ -0.33
PBX3-202ENST00000373482 GAGE7O76087 117 aa13.02□□□□□ -0.33
PBX3-202ENST00000373482 ORM1P02763 201 aa13.02□□□□□ -0.33
PBX3-202ENST00000373482 GAGE12FP0CL80 117 aa13.02□□□□□ -0.33
PBX3-202ENST00000373482 GAGE12GP0CL81 117 aa13.02□□□□□ -0.33
PBX3-202ENST00000373482 GAGE12IP0CL82 117 aa13.02□□□□□ -0.33
PBX3-202ENST00000373482 MDFICQ9P1T7 246 aa13.02□□□□□ -0.33
PBX3-202ENST00000373482 CSMD3Q7Z407 3707 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 TRGV1A0A0A0MS02 117 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 IGHV3-16A0A0C4DH30 117 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 RAB19A4D1S5 217 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 B4DEV8 164 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 ATP5G1P05496 136 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 HTN3P15516 51 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 CRIP1P50238 77 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 LGALS9BQ3B8N2 356 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 Q6ZTI0 123 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 NACAE9PAV3 2078 aa13.01□□□□□ -0.33
PBX3-202ENST00000373482 SPINK4O60575 86 aa13□□□□□ -0.33
PBX3-202ENST00000373482 MGST1P10620 155 aaKnown RBP13□□□□□ -0.33
PBX3-202ENST00000373482 PRR27Q6MZM9 219 aa13□□□□□ -0.33
PBX3-202ENST00000373482 LINC00612Q8N6U2 182 aa13□□□□□ -0.33
PBX3-202ENST00000373482 BIN3Q9NQY0 253 aa13□□□□□ -0.33
PBX3-202ENST00000373482 TRGV2A0A075B6R0 118 aa12.99□□□□□ -0.33
PBX3-202ENST00000373482 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
PBX3-202ENST00000373482 M0R036 132 aa12.99□□□□□ -0.33
PBX3-202ENST00000373482 S100A4P26447 101 aaKnown RBP12.99□□□□□ -0.33
PBX3-202ENST00000373482 CEBPGP53567 150 aa12.99□□□□□ -0.33
PBX3-202ENST00000373482 PARLQ9H300 379 aa12.99□□□□□ -0.33
PBX3-202ENST00000373482 IGLL5B9A064 214 aa12.98□□□□□ -0.33
PBX3-202ENST00000373482 ASIPP42127 132 aa12.98□□□□□ -0.33
PBX3-202ENST00000373482 OR5I1Q13606 314 aa12.98□□□□□ -0.33
PBX3-202ENST00000373482 PEA15Q15121 130 aa12.98□□□□□ -0.33
PBX3-202ENST00000373482 LINC01559Q495D7 138 aa12.98□□□□□ -0.33
PBX3-202ENST00000373482 DAZAP1Q96EP5 407 aaKnown RBP12.98□□□□□ -0.33
PBX3-202ENST00000373482 MRPL16Q9NX20 251 aaKnown RBP12.98□□□□□ -0.33
PBX3-202ENST00000373482 TRBV20OR9-2A0A075B6H5 130 aa12.97□□□□□ -0.33
PBX3-202ENST00000373482 KRBOX1C9JBD0 128 aa12.97□□□□□ -0.33
PBX3-202ENST00000373482 C9JCJ5 164 aa12.97□□□□□ -0.33
PBX3-202ENST00000373482 M0R2P5 195 aa12.97□□□□□ -0.33
PBX3-202ENST00000373482 IGLV2-8P01709 118 aa12.97□□□□□ -0.33
PBX3-202ENST00000373482 TCTAP57738 103 aa12.97□□□□□ -0.33
PBX3-202ENST00000373482 F5H768 121 aa12.96□□□□□ -0.33
PBX3-202ENST00000373482 SRP19P09132 144 aaKnown RBP12.96□□□□□ -0.33
PBX3-202ENST00000373482 C18orf15Q96N68 181 aa12.96□□□□□ -0.33
PBX3-202ENST00000373482 SMDT1Q9H4I9 107 aa12.96□□□□□ -0.33
PBX3-202ENST00000373482 TENM2Q9NT68 2774 aa12.96□□□□□ -0.34
PBX3-202ENST00000373482 STARD9Q9P2P6 4700 aa12.96□□□□□ -0.34
PBX3-202ENST00000373482 IGHV4-4A0A075B6R2 117 aa12.95□□□□□ -0.34
PBX3-202ENST00000373482 TMSB15BA0A087X1C1 80 aa12.95□□□□□ -0.34
PBX3-202ENST00000373482 PGPEP1LA6NFU8 196 aa12.95□□□□□ -0.34
PBX3-202ENST00000373482 DNLZQ5SXM8 178 aa12.95□□□□□ -0.34
PBX3-202ENST00000373482 RASL10AQ92737 203 aa12.95□□□□□ -0.34
PBX3-202ENST00000373482 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
PBX3-202ENST00000373482 C9orf85Q96MD7 179 aa12.95□□□□□ -0.34
PBX3-202ENST00000373482 RNASE3P12724 160 aaKnown RBP12.94□□□□□ -0.34
PBX3-202ENST00000373482 IFITM2Q01629 132 aa12.94□□□□□ -0.34
PBX3-202ENST00000373482 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
PBX3-202ENST00000373482 NDUFAF3Q9BU61 184 aa12.94□□□□□ -0.34
PBX3-202ENST00000373482 IL36BQ9NZH7 164 aa12.94□□□□□ -0.34
PBX3-202ENST00000373482 GRIFINA4D1Z8 144 aa12.93□□□□□ -0.34
PBX3-202ENST00000373482 ZNF727A8MUV8 499 aa12.93□□□□□ -0.34
PBX3-202ENST00000373482 H3BVH4 76 aa12.93□□□□□ -0.34
PBX3-202ENST00000373482 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
PBX3-202ENST00000373482 CLLU1Q5K131 121 aa12.93□□□□□ -0.34
PBX3-202ENST00000373482 OCC1Q8TAD7 63 aa12.93□□□□□ -0.34
PBX3-202ENST00000373482 P01737 135 aa12.92□□□□□ -0.34
PBX3-202ENST00000373482 CXCL1P09341 107 aa12.92□□□□□ -0.34
PBX3-202ENST00000373482 PTH2Q96A98 100 aa12.92□□□□□ -0.34
PBX3-202ENST00000373482 LY96Q9Y6Y9 160 aa12.92□□□□□ -0.34
PBX3-202ENST00000373482 C19orf71A6NCJ1 209 aa12.91□□□□□ -0.34
PBX3-202ENST00000373482 ARMS2P0C7Q2 107 aa12.91□□□□□ -0.34
PBX3-202ENST00000373482 RPL19P84098 196 aaKnown RBP12.91□□□□□ -0.34
PBX3-202ENST00000373482 FAM74A3Q4VXF1 159 aa12.91□□□□□ -0.34
PBX3-202ENST00000373482 TRAV4A0A0B4J268 109 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms