RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 KAAG1Q9UBP8 84 aa10.6□□□□□ -0.71
RAPGEF1-201ENST00000372189 NDUFS7O75251 213 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 COX8AP10176 69 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 ZNF318Q5VUA4 2279 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 IGHV3-73A0A0B4J1V6 119 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 G3V318 75 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 C1orf147Q96MC9 270 aaPredicted RBP10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 IGFL4Q6B9Z1 124 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 Q8N8P6 123 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 LY6G5BQ8NDX9 201 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 DKK1O94907 266 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 SPRY4Q9C004 299 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 HLA-DMBP28068 263 aa10.59□□□□□ -0.71
RAPGEF1-201ENST00000372189 TMEM213A2RRL7 107 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 SH2D6Q7Z4S9 175 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 NDUFB8O95169 186 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 DEFB131AP59861 70 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 NDUFA7O95182 113 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 ERCC8Q13216 396 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 CEND1Q8N111 149 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 DEFB104AQ8WTQ1 72 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGFBPL1Q8WX77 278 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGLL1P15814 213 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 HOXB4P17483 251 aaPredicted RBP10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 RSPO1Q2MKA7 263 aaPredicted RBP10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 LGALS9BQ3B8N2 356 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 LGALS9CQ6DKI2 356 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 NKAPP1Q8N9T2 125 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 TMEM141Q96I45 108 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 DKK4Q9UBT3 224 aa10.58□□□□□ -0.72
RAPGEF1-201ENST00000372189 NPYP01303 97 aa10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 FAM120AOSQ5T036 256 aa10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 SNRNP200O75643 2136 aaKnown RBP10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 PHF3Q92576 2039 aaKnown RBP10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 FER1L5A0AVI2 2057 aa10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 PRORYQ9H606 182 aa10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGHV3-53P01767 116 aa10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 NDUFA4L2Q9NRX3 87 aa10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 PRO1854Q9UHT4 67 aa10.57□□□□□ -0.72
RAPGEF1-201ENST00000372189 TRPT1Q86TN4 253 aaKnown RBP10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 A0A087WX48 190 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 CRYGBP07316 175 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 DEFB112Q30KQ8 113 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 LINC01545Q5VT33 79 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 C8orf49Q96NF6 230 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGKV3D-7A0A0C4DH55 119 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 NDUFS5O43920 106 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 AMTNQ6UX39 209 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGLC7A0M8Q6 106 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 C15orf65H3BRN8 121 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 FOXI1Q12951 378 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 MLST8Q9BVC4 326 aa10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 DIDO1Q9BTC0 2240 aaKnown RBP10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 COL4A4P53420 1690 aaPredicted RBP10.56□□□□□ -0.72
RAPGEF1-201ENST00000372189 PFN2P35080 140 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 TP53BP1Q12888 1972 aaPredicted RBP10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 PROP1O75360 226 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 DAZAP2Q15038 168 aaPredicted RBP10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGHV4-30-2A0A087WSY4 118 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 A0A087WWL8 130 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 SMIM26A0A096LP01 95 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGKV1-39P01597 117 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGKV1D-39P04432 117 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 C11orf52Q96A22 123 aa10.55□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGHV4-61A0A0C4DH41 118 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 PRIMA1Q86XR5 153 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 TP53TG1Q9Y2A0 90 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 TEN1Q86WV5 123 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 ATP6V0E2Q8NHE4 81 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 MPDZO75970 2070 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 C2orf66Q6UXQ4 117 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 DEFB125Q8N687 156 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 PRO0628Q9UI54 55 aa10.54□□□□□ -0.72
RAPGEF1-201ENST00000372189 CSDC2Q9Y534 153 aaKnown RBP10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 NDUFA4O00483 81 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 C6orf226Q5I0X4 101 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 PRSS57Q6UWY2 283 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGHV4-59P01825 116 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 DOCK9Q9BZ29 2069 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 PSCAO43653 123 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 DEFB130BP0DP73 79 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 DEFB130AP0DP74 79 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 APOC4P55056 127 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 CTSZQ9UBR2 303 aa10.53□□□□□ -0.72
RAPGEF1-201ENST00000372189 IGLV3-1P01715 115 aa10.52□□□□□ -0.73
RAPGEF1-201ENST00000372189 ZNF407Q9C0G0 2248 aa10.52□□□□□ -0.73
RAPGEF1-201ENST00000372189 NRGNQ92686 78 aa10.52□□□□□ -0.73
RAPGEF1-201ENST00000372189 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.73
RAPGEF1-201ENST00000372189 DIAPH2-AS1Q14236 149 aa10.52□□□□□ -0.73
RAPGEF1-201ENST00000372189 XCL2Q9UBD3 114 aa10.51□□□□□ -0.73
RAPGEF1-201ENST00000372189 CACNA1DQ01668 2161 aa10.51□□□□□ -0.73
RAPGEF1-201ENST00000372189 ZNF134P52741 427 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms