RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 UFC1Q9Y3C8 167 aa14□□□□□ -0.17
VEGFA-206ENST00000372077 MAST4O15021 2626 aa13.99□□□□□ -0.17
VEGFA-206ENST00000372077 ARMS2P0C7Q2 107 aa13.99□□□□□ -0.17
VEGFA-206ENST00000372077 HLA-DMBP28068 263 aa13.99□□□□□ -0.17
VEGFA-206ENST00000372077 TM4SF20Q53R12 229 aa13.99□□□□□ -0.17
VEGFA-206ENST00000372077 LOC102724200A0A096LPH7 203 aaPredicted RBP13.99□□□□□ -0.17
VEGFA-206ENST00000372077 HBBP68871 147 aa13.99□□□□□ -0.17
VEGFA-206ENST00000372077 WFDC3Q8IUB2 231 aa13.99□□□□□ -0.17
VEGFA-206ENST00000372077 Q8TAT8 98 aa13.99□□□□□ -0.17
VEGFA-206ENST00000372077 RAX2Q96IS3 184 aa13.99□□□□□ -0.17
VEGFA-206ENST00000372077 A0A1W2PRX2 142 aa13.98□□□□□ -0.17
VEGFA-206ENST00000372077 RPL7P18124 248 aaKnown RBP13.98□□□□□ -0.17
VEGFA-206ENST00000372077 TSPOP30536 169 aa13.98□□□□□ -0.17
VEGFA-206ENST00000372077 SLURP1P55000 103 aa13.98□□□□□ -0.17
VEGFA-206ENST00000372077 FHL3Q13643 280 aa13.98□□□□□ -0.17
VEGFA-206ENST00000372077 IGHV7-4-1A0A0J9YVY3 117 aa13.98□□□□□ -0.17
VEGFA-206ENST00000372077 SYNJ2BPP57105 145 aa13.98□□□□□ -0.17
VEGFA-206ENST00000372077 C5orf17Q8NAS9 161 aa13.98□□□□□ -0.17
VEGFA-206ENST00000372077 OCIAD2Q56VL3 154 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 PRIMA1Q86XR5 153 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 ZNF738Q8NE65 137 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 DUX3Q96PT4 197 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 TMEM213A2RRL7 107 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 NDUFA11Q86Y39 141 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 OR4F17Q8NGA8 305 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 SMPXQ9UHP9 88 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 SMAD5-AS1Q9Y6J3 95 aa13.97□□□□□ -0.17
VEGFA-206ENST00000372077 TEP1Q99973 2627 aaKnown RBP13.97□□□□□ -0.17
VEGFA-206ENST00000372077 IGKV2-40A0A087WW87 121 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-206ENST00000372077 IGKV2D-40P01614 121 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-206ENST00000372077 GLMPQ8WWB7 406 aa13.96□□□□□ -0.17
VEGFA-206ENST00000372077 ZNF785A8K8V0 405 aa13.96□□□□□ -0.17
VEGFA-206ENST00000372077 CCL24O00175 119 aa13.96□□□□□ -0.17
VEGFA-206ENST00000372077 KRTAP24-1Q3LI83 254 aa13.96□□□□□ -0.17
VEGFA-206ENST00000372077 Q86TA4 180 aa13.96□□□□□ -0.17
VEGFA-206ENST00000372077 TMEM75Q8N9X5 138 aa13.96□□□□□ -0.17
VEGFA-206ENST00000372077 NIPBLQ6KC79 2804 aaeCLIP13.96□□□□□ -0.181e-6■■□□□ 11.7
VEGFA-206ENST00000372077 IGHV1-24A0A0C4DH33 117 aa13.96□□□□□ -0.18
VEGFA-206ENST00000372077 A8MWL6 223 aa13.96□□□□□ -0.18
VEGFA-206ENST00000372077 MLST8Q9BVC4 326 aa13.96□□□□□ -0.18
VEGFA-206ENST00000372077 CST9LQ9H4G1 147 aa13.96□□□□□ -0.18
VEGFA-206ENST00000372077 COX11Q9Y6N1 276 aa13.95□□□□□ -0.18
VEGFA-206ENST00000372077 C2orf70A6NJV1 201 aa13.95□□□□□ -0.18
VEGFA-206ENST00000372077 SMKR1H3BMG3 65 aa13.95□□□□□ -0.18
VEGFA-206ENST00000372077 LTAP01374 205 aa13.95□□□□□ -0.18
VEGFA-206ENST00000372077 DLX4Q92988 240 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-206ENST00000372077 RHPN1-AS1Q9BWJ2 59 aa13.95□□□□□ -0.18
VEGFA-206ENST00000372077 TRBV19A0A075B6N1 114 aa13.94□□□□□ -0.18
VEGFA-206ENST00000372077 A6NJY4 79 aa13.94□□□□□ -0.18
VEGFA-206ENST00000372077 IGLV2-11P01706 119 aa13.94□□□□□ -0.18
VEGFA-206ENST00000372077 EDN2P20800 178 aa13.94□□□□□ -0.18
VEGFA-206ENST00000372077 OR4C46A6NHA9 309 aa13.94□□□□□ -0.18
VEGFA-206ENST00000372077 A0A087X0K7 114 aa13.93□□□□□ -0.18
VEGFA-206ENST00000372077 FAM231DQ6ZW35 169 aa13.93□□□□□ -0.18
VEGFA-206ENST00000372077 A0A1B0GXF2 115 aa13.93□□□□□ -0.18
VEGFA-206ENST00000372077 CRIP1P50238 77 aa13.93□□□□□ -0.18
VEGFA-206ENST00000372077 PDE6HQ13956 83 aa13.92□□□□□ -0.18
VEGFA-206ENST00000372077 NSUN5P1Q3KNT7 163 aa13.92□□□□□ -0.18
VEGFA-206ENST00000372077 CITED1Q99966 193 aa13.92□□□□□ -0.18
VEGFA-206ENST00000372077 C19orf71A6NCJ1 209 aa13.92□□□□□ -0.18
VEGFA-206ENST00000372077 LEPROTL1O95214 131 aa13.92□□□□□ -0.18
VEGFA-206ENST00000372077 SIGLEC15Q6ZMC9 328 aa13.92□□□□□ -0.18
VEGFA-206ENST00000372077 RBPMS2Q6ZRY4 209 aaKnown RBP13.92□□□□□ -0.18
VEGFA-206ENST00000372077 OR9G4Q8NGQ1 327 aa13.92□□□□□ -0.18
VEGFA-206ENST00000372077 RIPPLY3P57055 190 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 SMIM12Q96EX1 92 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 FMC1Q96HJ9 113 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 PEMTQ9UBM1 199 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 JMJD1CQ15652 2540 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 ADAMTSL5Q6ZMM2 481 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 LYPD1Q8N2G4 141 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 NCR2O95944 276 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 TMEM70Q9BUB7 260 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 KLF12Q9Y4X4 402 aa13.91□□□□□ -0.18
VEGFA-206ENST00000372077 PSG8Q9UQ74 426 aa13.9□□□□□ -0.18
VEGFA-206ENST00000372077 SETD2Q9BYW2 2564 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-206ENST00000372077 TRAV9-2A0A087WT02 112 aa13.9□□□□□ -0.18
VEGFA-206ENST00000372077 VAMP3Q15836 100 aa13.9□□□□□ -0.18
VEGFA-206ENST00000372077 MPV17L2Q567V2 206 aa13.9□□□□□ -0.18
VEGFA-206ENST00000372077 OTORQ9NRC9 128 aa13.9□□□□□ -0.18
VEGFA-206ENST00000372077 OR8A1Q8NGG7 326 aa13.89□□□□□ -0.19
VEGFA-206ENST00000372077 J3KRW8 73 aa13.89□□□□□ -0.19
VEGFA-206ENST00000372077 SPRY2O43597 315 aa13.89□□□□□ -0.19
VEGFA-206ENST00000372077 AMN1Q8IY45 258 aa13.88□□□□□ -0.19
VEGFA-206ENST00000372077 RNF182Q8N6D2 247 aa13.88□□□□□ -0.19
VEGFA-206ENST00000372077 PSG9Q00887 426 aa13.88□□□□□ -0.19
VEGFA-206ENST00000372077 IFI27P40305 119 aaPredicted RBP13.87□□□□□ -0.19
VEGFA-206ENST00000372077 ERCC8Q13216 396 aa13.87□□□□□ -0.19
VEGFA-206ENST00000372077 COX19Q49B96 90 aa13.87□□□□□ -0.19
VEGFA-206ENST00000372077 OVOL1O14753 267 aa13.87□□□□□ -0.19
VEGFA-206ENST00000372077 GAS8-AS1O95177 125 aa13.87□□□□□ -0.19
VEGFA-206ENST00000372077 PRSS3P2Q8NHM4 247 aa13.87□□□□□ -0.19
VEGFA-206ENST00000372077 MSRB1Q9NZV6 116 aa13.87□□□□□ -0.19
VEGFA-206ENST00000372077 SYS1-DBNDD2H3BUS1 97 aa13.86□□□□□ -0.19
VEGFA-206ENST00000372077 K7ERU9 68 aa13.86□□□□□ -0.19
VEGFA-206ENST00000372077 LYZL1Q6UWQ5 148 aa13.86□□□□□ -0.19
VEGFA-206ENST00000372077 VGLL1Q99990 258 aa13.86□□□□□ -0.19
VEGFA-206ENST00000372077 Q6ZQT7 251 aa13.86□□□□□ -0.19
VEGFA-206ENST00000372077 NAA38Q9BRA0 125 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms