RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 SRSF2Q01130 221 aaKnown RBP9.27□□□□□ -0.93
PTPN1-201ENST00000371621 CLEC19AQ6UXS0 136 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 SHANK2-AS3Q9BTD1 123 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 SMIM2Q9BVW6 85 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 SLC25A15Q9Y619 301 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 TRGV3P03979 118 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 NDUFA11Q86Y39 141 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 SAP25Q8TEE9 199 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 RHODO00212 210 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 CRLF1O75462 422 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 PVRIGQ6DKI7 326 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 MLST8Q9BVC4 326 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 C17orf58Q2M2W7 97 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 C17orf82Q86X59 251 aaPredicted RBP9.26□□□□□ -0.93
PTPN1-201ENST00000371621 EEF1AKMT3Q96AZ1 226 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 SETD2Q9BYW2 2564 aaPredicted RBP9.26□□□□□ -0.93
PTPN1-201ENST00000371621 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 RBAKDNA6NC62 111 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 GP9P14770 177 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 Q71RC1 249 aaPredicted RBP9.26□□□□□ -0.93
PTPN1-201ENST00000371621 CLEC2BQ92478 149 aa9.26□□□□□ -0.93
PTPN1-201ENST00000371621 KLK5Q9Y337 293 aaPredicted RBP9.26□□□□□ -0.93
PTPN1-201ENST00000371621 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
PTPN1-201ENST00000371621 ARRDC1-AS1Q9H2J1 176 aa9.25□□□□□ -0.93
PTPN1-201ENST00000371621 TM4SF5O14894 197 aa9.25□□□□□ -0.93
PTPN1-201ENST00000371621 CD28P10747 220 aa9.25□□□□□ -0.93
PTPN1-201ENST00000371621 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
PTPN1-201ENST00000371621 C1orf159Q96HA4 380 aa9.25□□□□□ -0.93
PTPN1-201ENST00000371621 IGHV3-73A0A0B4J1V6 119 aa9.25□□□□□ -0.93
PTPN1-201ENST00000371621 Q0VFX4 171 aa9.25□□□□□ -0.93
PTPN1-201ENST00000371621 RNASE13Q5GAN3 156 aaKnown RBP9.25□□□□□ -0.93
PTPN1-201ENST00000371621 RPL39LQ96EH5 51 aaKnown RBP9.25□□□□□ -0.93
PTPN1-201ENST00000371621 A0A1B0GX51 115 aa9.24□□□□□ -0.93
PTPN1-201ENST00000371621 LYNX1G3V0Z9 82 aa9.24□□□□□ -0.93
PTPN1-201ENST00000371621 LYNX1P0DP58 116 aa9.24□□□□□ -0.93
PTPN1-201ENST00000371621 TMEM200BQ69YZ2 307 aa9.24□□□□□ -0.93
PTPN1-201ENST00000371621 FAM27E3Q08E93 113 aa9.24□□□□□ -0.93
PTPN1-201ENST00000371621 hADV29S1A0JD25 119 aa9.24□□□□□ -0.93
PTPN1-201ENST00000371621 MRAPQ8TCY5 172 aa9.24□□□□□ -0.93
PTPN1-201ENST00000371621 SIGLEC9Q9Y336 463 aa9.24□□□□□ -0.93
PTPN1-201ENST00000371621 IGHV1-18A0A0C4DH31 117 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
PTPN1-201ENST00000371621 C9orf106Q8NAJ2 232 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 AJUBAQ96IF1 538 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 ZNF876PQ49A33 203 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 LYPD1Q8N2G4 141 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 IGFBPL1Q8WX77 278 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 DPH3P1Q9H4G8 78 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 VPREB3Q9UKI3 123 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 LTBP2Q14767 1821 aa9.23□□□□□ -0.93
PTPN1-201ENST00000371621 C1orf229Q6ZS94 237 aaPredicted RBP9.23□□□□□ -0.93
PTPN1-201ENST00000371621 C11orf53Q8IXP5 236 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 NBEAQ8NFP9 2946 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 A0A0U1RQV1 116 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 IGLC6P0CF74 106 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 DAND5Q8N907 189 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 SPRR3Q9UBC9 169 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 TINCRA0A1B0GVN0 87 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
PTPN1-201ENST00000371621 LINC01548A6NM66 108 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 SHISA9B4DS77 424 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 IGLV3-19P01714 112 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 SYNJ2BPP57105 145 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 ASCL5Q7RTU5 278 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 PTPRSQ13332 1948 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 TTC28Q96AY4 2481 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 C2orf16Q68DN1 1984 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 OTOGLQ3ZCN5 2332 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 TRAV12-1A0A0B4J245 112 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 MRPS12O15235 138 aaKnown RBP9.21□□□□□ -0.93
PTPN1-201ENST00000371621 CRIP2P52943 208 aaPredicted RBP9.21□□□□□ -0.93
PTPN1-201ENST00000371621 SIGLEC15Q6ZMC9 328 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 CFHR4Q92496 578 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 HHLA3Q9XRX5 114 aa9.21□□□□□ -0.93
PTPN1-201ENST00000371621 ZNF462Q96JM2 2506 aa9.21□□□□□ -0.94
PTPN1-201ENST00000371621 F5H768 121 aa9.21□□□□□ -0.94
PTPN1-201ENST00000371621 LTBRP36941 435 aa9.21□□□□□ -0.94
PTPN1-201ENST00000371621 RPL39P62891 51 aaKnown RBP9.21□□□□□ -0.94
PTPN1-201ENST00000371621 TMEM30BQ3MIR4 351 aa9.21□□□□□ -0.94
PTPN1-201ENST00000371621 S100A7L2Q5SY68 101 aa9.21□□□□□ -0.94
PTPN1-201ENST00000371621 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.94
PTPN1-201ENST00000371621 C11orf86A6NJI1 115 aa9.21□□□□□ -0.94
PTPN1-201ENST00000371621 SMIM9A6NGZ8 99 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 HOXD3P31249 432 aaPredicted RBP9.2□□□□□ -0.94
PTPN1-201ENST00000371621 SPRNQ5BIV9 151 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 RITA1Q96K30 269 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 NTN3O00634 580 aaPredicted RBP9.2□□□□□ -0.94
PTPN1-201ENST00000371621 DYNAPQ8N1N2 210 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 THAP8Q8NA92 274 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 IGHV1-46P01743 117 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 CRIP1P50238 77 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 C19orf54Q5BKX5 351 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 SLC50A1Q9BRV3 221 aa9.2□□□□□ -0.94
PTPN1-201ENST00000371621 DMDP11532 3685 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 A0A096LNJ9 63 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 IGHV3-11P01762 117 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 ZNF491Q8N8L2 437 aa9.19□□□□□ -0.94
PTPN1-201ENST00000371621 ANKHD1Q8IWZ3 2542 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms