RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 HLA-DMBP28068 263 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 EWSR1Q01844 656 aaKnown RBP eCLIP5.38□□□□□ -1.55
USP1-202ENST00000371146 IL15RAQ13261 267 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 C9orf66Q5T8R8 295 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 OCC1Q8TAD7 63 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 FANCD2OSQ96PS1 177 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 TP53TG3Q9ULZ0 132 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 WI2-2373I1.2A0A1W2PRP0 233 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 PMS2P5A8MQ11 134 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 TMEM250H0YL14 139 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 M0R3E3 92 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 MGST1P10620 155 aaKnown RBP5.38□□□□□ -1.55
USP1-202ENST00000371146 SNRPD3P62318 126 aaKnown RBP5.38□□□□□ -1.55
USP1-202ENST00000371146 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 RNF5Q99942 180 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 CDIP1Q9H305 208 aa5.38□□□□□ -1.55
USP1-202ENST00000371146 TMEM89A2RUT3 159 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 J3KT08 172 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 Q6ZUT4 128 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
USP1-202ENST00000371146 OR10AG1Q8NH19 301 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 DDB2Q92466 427 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 SPRY2O43597 315 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 CA1P00915 261 aaPredicted RBP5.37□□□□□ -1.55
USP1-202ENST00000371146 IGHV3-53P01767 116 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 PRM2P04554 102 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 CSN1S1P47710 185 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 KRTDAPP60985 99 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 ASPHD1Q5U4P2 390 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 NPBQ8NG41 125 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 AAMDCQ9H7C9 122 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 TRAPPC1Q9Y5R8 145 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 FAM90A9PA6NNJ1 464 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 TEX22C9J3V5 150 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 FSTL3O95633 263 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 SLC25A5P05141 298 aaKnown RBP5.37□□□□□ -1.55
USP1-202ENST00000371146 CRYGDP07320 174 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 MYCNOSP40205 109 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 Q6AWC8 147 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 KCNIP4Q6PIL6 250 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 C8orf31Q8N9H6 132 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 C18orf32Q8TCD1 76 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 ZNF747Q9BV97 191 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 ZMAT4Q9H898 229 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 SPCS1Q9Y6A9 102 aa5.37□□□□□ -1.55
USP1-202ENST00000371146 PIGBOS1A0A0B4J2F0 54 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 A0A1W2PPM0 123 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 OR4C46A6NHA9 309 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 C2orf70A6NJV1 201 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 SERF1AO75920 110 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 HBE1P02100 147 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 S100A4P26447 101 aaKnown RBP5.36□□□□□ -1.55
USP1-202ENST00000371146 ARL16Q0P5N6 197 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 SPINK13Q1W4C9 94 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 ADAMTSL5Q6ZMM2 481 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 STPG3Q8N7X2 389 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 LINC01587Q99440 93 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 ZNF256Q9Y2P7 627 aaPredicted RBP5.36□□□□□ -1.55
USP1-202ENST00000371146 TRAV1-1A0A0B4J248 108 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 LOC102723971A0A1B0GUV8 181 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 C9JCJ5 164 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 ZNF561-AS1K7EIQ3 104 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 RHODO00212 210 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 NDUFA3O95167 84 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 FSHBP01225 129 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 EGR2P11161 476 aaPredicted RBP5.36□□□□□ -1.55
USP1-202ENST00000371146 PSMB8P28062 276 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 PRR31Q5SQ13 230 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 GNPNAT1Q96EK6 184 aaPredicted RBP5.36□□□□□ -1.55
USP1-202ENST00000371146 LINC00477Q96M19 166 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 MAP1LC3AQ9H492 121 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 NRN1Q9NPD7 142 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 TMEM14BQ9NUH8 114 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 GNG13Q9P2W3 67 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 V9GYY9 64 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 TRBV7-1A0A0A6YYK4 115 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 FNDC10F2Z333 226 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 K7EIM0 57 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 CTSGP08311 255 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 RPL7P18124 248 aaKnown RBP5.36□□□□□ -1.55
USP1-202ENST00000371146 ADMP35318 185 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 NDUFV3P56181 108 aaKnown RBP5.36□□□□□ -1.55
USP1-202ENST00000371146 C6orf226Q5I0X4 101 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 LCN12Q6JVE5 192 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 EXOC3-AS1Q8N2X6 119 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 OR10G7Q8NGN6 311 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 CCDC140Q96MF4 163 aa5.36□□□□□ -1.55
USP1-202ENST00000371146 CYP2G1PQ6ZSU1 146 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 C9orf139Q6ZV77 190 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 ATP6V0E2Q8NHE4 81 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 PMCHL2Q9BQD1 86 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 SH3BGRL3Q9H299 93 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 RPRMQ9NS64 109 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 PGPA6NDG6 321 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 FAM223BA6NKX1 122 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 MT-ATP8P03928 68 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 CRYBB3P26998 211 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 NMSQ5H8A3 153 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 SLC25A34Q6PIV7 304 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms