RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 MRAPQ8TCY5 172 aa14.2□□□□□ -0.14
CHRNA4-201ENST00000370263 TRAV12-2A0A075B6T6 113 aa14.2□□□□□ -0.14
CHRNA4-201ENST00000370263 MRPL53Q96EL3 112 aaKnown RBP14.2□□□□□ -0.14
CHRNA4-201ENST00000370263 TTTY13Q9BZ97 58 aa14.2□□□□□ -0.14
CHRNA4-201ENST00000370263 LENEPQ9Y5L5 61 aa14.2□□□□□ -0.14
CHRNA4-201ENST00000370263 TMEM243Q9BU79 118 aa14.19□□□□□ -0.14
CHRNA4-201ENST00000370263 MGAMO43451 1857 aa14.19□□□□□ -0.14
CHRNA4-201ENST00000370263 FOXE3Q13461 319 aa14.19□□□□□ -0.14
CHRNA4-201ENST00000370263 RS1O15537 224 aa14.18□□□□□ -0.14
CHRNA4-201ENST00000370263 C2orf70A6NJV1 201 aa14.18□□□□□ -0.14
CHRNA4-201ENST00000370263 LINC01620Q4KN68 170 aa14.18□□□□□ -0.14
CHRNA4-201ENST00000370263 DENND4AQ7Z401 1863 aa14.18□□□□□ -0.14
CHRNA4-201ENST00000370263 TRAV12-1A0A0B4J245 112 aa14.18□□□□□ -0.14
CHRNA4-201ENST00000370263 A4D1N5 150 aa14.18□□□□□ -0.14
CHRNA4-201ENST00000370263 BPESC1Q9GZL8 116 aa14.18□□□□□ -0.14
CHRNA4-201ENST00000370263 FNDC1Q4ZHG4 1894 aaPredicted RBP14.18□□□□□ -0.14
CHRNA4-201ENST00000370263 PRSS47A8MTI9 375 aa14.17□□□□□ -0.14
CHRNA4-201ENST00000370263 ATP6V0E2Q8NHE4 81 aa14.17□□□□□ -0.14
CHRNA4-201ENST00000370263 ZNF407Q9C0G0 2248 aa14.17□□□□□ -0.14
CHRNA4-201ENST00000370263 CADP27708 2225 aa14.17□□□□□ -0.14
CHRNA4-201ENST00000370263 DSCR8Q96T75 97 aa14.17□□□□□ -0.14
CHRNA4-201ENST00000370263 MSRB1Q9NZV6 116 aa14.17□□□□□ -0.14
CHRNA4-201ENST00000370263 XCL2Q9UBD3 114 aa14.17□□□□□ -0.14
CHRNA4-201ENST00000370263 RNASE13Q5GAN3 156 aaKnown RBP14.17□□□□□ -0.14
CHRNA4-201ENST00000370263 GNRH2O43555 120 aa14.16□□□□□ -0.14
CHRNA4-201ENST00000370263 RBM3P98179 157 aaKnown RBP14.16□□□□□ -0.14
CHRNA4-201ENST00000370263 TMEM258P61165 79 aa14.16□□□□□ -0.14
CHRNA4-201ENST00000370263 KLHL30-AS1Q8NEE0 82 aa14.16□□□□□ -0.14
CHRNA4-201ENST00000370263 MUSTN1Q8IVN3 82 aa14.16□□□□□ -0.14
CHRNA4-201ENST00000370263 NXPH4O95158 308 aa14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 KAAG1Q9UBP8 84 aa14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 EP300Q09472 2414 aaPredicted RBP14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 DEFB130BP0DP73 79 aa14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 DEFB130AP0DP74 79 aa14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 DOCK7Q96N67 2140 aa14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 NSUN5P1Q3KNT7 163 aa14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 SPATA12Q7Z6I5 190 aa14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 ARFGEF3Q5TH69 2177 aa14.15□□□□□ -0.14
CHRNA4-201ENST00000370263 RUSC1-AS1Q66K80 236 aa14.15□□□□□ -0.15
CHRNA4-201ENST00000370263 FAM236AA0A1B0GUQ0 79 aa14.14□□□□□ -0.15
CHRNA4-201ENST00000370263 FAM236BA0A1B0GV22 79 aa14.14□□□□□ -0.15
CHRNA4-201ENST00000370263 ICOSQ9Y6W8 199 aa14.14□□□□□ -0.15
CHRNA4-201ENST00000370263 ATOX1O00244 68 aa14.14□□□□□ -0.15
CHRNA4-201ENST00000370263 RPL39LQ96EH5 51 aaKnown RBP14.14□□□□□ -0.15
CHRNA4-201ENST00000370263 Q9H8V8 135 aa14.14□□□□□ -0.15
CHRNA4-201ENST00000370263 C22orf46C9J442 243 aa14.14□□□□□ -0.15
CHRNA4-201ENST00000370263 RNF138Q8WVD3 245 aa14.14□□□□□ -0.15
CHRNA4-201ENST00000370263 LY6G6EA0A0G2JKS1 128 aa14.13□□□□□ -0.15
CHRNA4-201ENST00000370263 J3KT08 172 aa14.13□□□□□ -0.15
CHRNA4-201ENST00000370263 U3KQA8 63 aa14.13□□□□□ -0.15
CHRNA4-201ENST00000370263 COL4A6Q14031 1691 aa14.13□□□□□ -0.15
CHRNA4-201ENST00000370263 A0A0B4J2C4 111 aa14.13□□□□□ -0.15
CHRNA4-201ENST00000370263 IGHV7-4-1A0A0J9YVY3 117 aa14.13□□□□□ -0.15
CHRNA4-201ENST00000370263 IGLV2-14P01704 120 aa14.12□□□□□ -0.15
CHRNA4-201ENST00000370263 I3L2K1 104 aa14.12□□□□□ -0.15
CHRNA4-201ENST00000370263 E9PLD3 99 aa14.12□□□□□ -0.15
CHRNA4-201ENST00000370263 IGKV1-17P01599 117 aa14.12□□□□□ -0.15
CHRNA4-201ENST00000370263 ODF1Q14990 250 aa14.12□□□□□ -0.15
CHRNA4-201ENST00000370263 YPEL4Q96NS1 127 aa14.12□□□□□ -0.15
CHRNA4-201ENST00000370263 CACNA1GO43497 2377 aa14.12□□□□□ -0.15
CHRNA4-201ENST00000370263 CDK2AP2O75956 126 aa14.11□□□□□ -0.15
CHRNA4-201ENST00000370263 ORMDL1Q9P0S3 153 aa14.11□□□□□ -0.15
CHRNA4-201ENST00000370263 KMT2EQ8IZD2 1858 aa14.11□□□□□ -0.15
CHRNA4-201ENST00000370263 IGHV1-69P01742 117 aa14.11□□□□□ -0.15
CHRNA4-201ENST00000370263 ZFP2Q6ZN57 461 aa14.11□□□□□ -0.15
CHRNA4-201ENST00000370263 CREBBPQ92793 2442 aa14.1□□□□□ -0.15
CHRNA4-201ENST00000370263 IGKV1OR2-108A0A075B7D4 117 aa14.1□□□□□ -0.15
CHRNA4-201ENST00000370263 HERV-K104P63124 156 aa14.1□□□□□ -0.15
CHRNA4-201ENST00000370263 THSD7BQ9C0I4 1608 aa14.1□□□□□ -0.15
CHRNA4-201ENST00000370263 CFHR3Q02985 330 aa14.09□□□□□ -0.15
CHRNA4-201ENST00000370263 F6UB75 175 aa14.09□□□□□ -0.15
CHRNA4-201ENST00000370263 TCTEX1D4Q5JR98 221 aa14.09□□□□□ -0.15
CHRNA4-201ENST00000370263 K7EIM0 57 aa14.09□□□□□ -0.15
CHRNA4-201ENST00000370263 TRBV10-2A0A0K0K1G8 114 aa14.09□□□□□ -0.15
CHRNA4-201ENST00000370263 A0A1B0GX51 115 aa14.09□□□□□ -0.15
CHRNA4-201ENST00000370263 SPRY2O43597 315 aa14.09□□□□□ -0.15
CHRNA4-201ENST00000370263 SUMO4Q6EEV6 95 aa14.09□□□□□ -0.15
CHRNA4-201ENST00000370263 C19orf71A6NCJ1 209 aa14.08□□□□□ -0.15
CHRNA4-201ENST00000370263 A0A0J9YXV3 536 aa14.08□□□□□ -0.16
CHRNA4-201ENST00000370263 A0A1B0GXF2 115 aa14.08□□□□□ -0.16
CHRNA4-201ENST00000370263 LHBP01229 141 aa14.08□□□□□ -0.16
CHRNA4-201ENST00000370263 CTRLP40313 264 aa14.08□□□□□ -0.16
CHRNA4-201ENST00000370263 RBX1P62877 108 aa14.08□□□□□ -0.16
CHRNA4-201ENST00000370263 SPTAN1Q13813 2472 aaKnown RBP14.08□□□□□ -0.16
CHRNA4-201ENST00000370263 TRAV25A0A0B4J276 109 aa14.08□□□□□ -0.16
CHRNA4-201ENST00000370263 EML6Q6ZMW3 1958 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 TOMM6Q96B49 74 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 TRBV6-1A0A0K0K1D8 114 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 BAALCQ8WXS3 180 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 ODF3L1Q8IXM7 274 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 SLC25A29Q8N8R3 303 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 CACNA1HO95180 2353 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 IGKV2-29A2NJV5 120 aaPredicted RBP14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 ZNF561-AS1K7EIQ3 104 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 H3BT86 120 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 C1orf43Q9BWL3 253 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 NCOR1O75376 2440 aa14.07□□□□□ -0.16
CHRNA4-201ENST00000370263 LINC01619G3V211 115 aa14.06□□□□□ -0.16
CHRNA4-201ENST00000370263 CTSZQ9UBR2 303 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms